RNA–Protein interactions for RNA: ENST00000381077.9

PUDP-201, Transcript of pseudouridine 5'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PUDP, Length 2,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-201ENST00000381077 KIF4BQ2VIQ3 1234 aa14.12□□□□□ -0.15
PUDP-201ENST00000381077 DPP8Q6V1X1 898 aaPredicted RBP14.12□□□□□ -0.15
PUDP-201ENST00000381077 CCDC84Q86UT8 332 aaPredicted RBP14.12□□□□□ -0.15
PUDP-201ENST00000381077 MSANTD4Q8NCY6 345 aa14.12□□□□□ -0.15
PUDP-201ENST00000381077 DCAF4Q8WV16 495 aa14.12□□□□□ -0.15
PUDP-201ENST00000381077 RAD54LQ92698 747 aa14.12□□□□□ -0.15
PUDP-201ENST00000381077 RPGRIP1Q96KN7 1286 aa14.12□□□□□ -0.15
PUDP-201ENST00000381077 ZDHHC15Q96MV8 337 aa14.12□□□□□ -0.15
PUDP-201ENST00000381077 TSGA10Q9BZW7 698 aa14.12□□□□□ -0.15
PUDP-201ENST00000381077 UBA5Q9GZZ9 404 aa14.12□□□□□ -0.15
PUDP-201ENST00000381077 ARFGAP3Q9NP61 516 aa14.12□□□□□ -0.15
PUDP-201ENST00000381077 USP40Q9NVE5 1235 aa14.12□□□□□ -0.15
PUDP-201ENST00000381077 SYNPO2Q9UMS6 1093 aa14.12□□□□□ -0.15
PUDP-201ENST00000381077 MTMR7Q9Y216 660 aa14.12□□□□□ -0.15
PUDP-201ENST00000381077 EIF3CLB5ME19 914 aaKnown RBP14.12□□□□□ -0.15
PUDP-201ENST00000381077 USP11P51784 963 aa14.12□□□□□ -0.15
PUDP-201ENST00000381077 TBC1D8BQ0IIM8 1120 aa14.12□□□□□ -0.15
PUDP-201ENST00000381077 ANKRD40Q6AI12 368 aa14.12□□□□□ -0.15
PUDP-201ENST00000381077 SLC51AQ86UW1 340 aa14.12□□□□□ -0.15
PUDP-201ENST00000381077 KCTD17Q8N5Z5 321 aa14.12□□□□□ -0.15
PUDP-201ENST00000381077 EIF3CQ99613 913 aaKnown RBP14.12□□□□□ -0.15
PUDP-201ENST00000381077 VAT1LQ9HCJ6 419 aa14.12□□□□□ -0.15
PUDP-201ENST00000381077 NYAP2Q9P242 653 aa14.12□□□□□ -0.15
PUDP-201ENST00000381077 RAB21Q9UL25 225 aa14.12□□□□□ -0.15
PUDP-201ENST00000381077 MYH4Q9Y623 1939 aa14.12□□□□□ -0.15
PUDP-201ENST00000381077 KRT86O43790 486 aa14.11□□□□□ -0.15
PUDP-201ENST00000381077 TRIM21P19474 475 aaKnown RBP14.11□□□□□ -0.15
PUDP-201ENST00000381077 TXKP42681 527 aa14.11□□□□□ -0.15
PUDP-201ENST00000381077 CC2D1AQ6P1N0 951 aaPredicted RBP14.11□□□□□ -0.15
PUDP-201ENST00000381077 ADGRF4Q8IZF3 695 aa14.11□□□□□ -0.15
PUDP-201ENST00000381077 SLC35F6Q8N357 371 aa14.11□□□□□ -0.15
PUDP-201ENST00000381077 TXLNBQ8N3L3 684 aa14.11□□□□□ -0.15
PUDP-201ENST00000381077 KIAA0895Q8NCT3 520 aa14.11□□□□□ -0.15
PUDP-201ENST00000381077 MASTLQ96GX5 879 aa14.11□□□□□ -0.15
PUDP-201ENST00000381077 PNMA5Q96PV4 448 aa14.11□□□□□ -0.15
PUDP-201ENST00000381077 NOC4LQ9BVI4 516 aaKnown RBP14.11□□□□□ -0.15
PUDP-201ENST00000381077 IDI2Q9BXS1 227 aa14.11□□□□□ -0.15
PUDP-201ENST00000381077 GBP3Q9H0R5 595 aa14.11□□□□□ -0.15
PUDP-201ENST00000381077 CPVLQ9H3G5 476 aa14.11□□□□□ -0.15
PUDP-201ENST00000381077 DDX4Q9NQI0 724 aaKnown RBP14.11□□□□□ -0.15
PUDP-201ENST00000381077 COL2A1P02458 1487 aaPredicted RBP14.11□□□□□ -0.15
PUDP-201ENST00000381077 ANO9A1A5B4 782 aa14.11□□□□□ -0.15
PUDP-201ENST00000381077 MTIF2P46199 727 aaKnown RBP14.11□□□□□ -0.15
PUDP-201ENST00000381077 AP3B2Q13367 1082 aa14.11□□□□□ -0.15
PUDP-201ENST00000381077 PICALMQ13492 652 aa14.11□□□□□ -0.15
PUDP-201ENST00000381077 MAN2A1Q16706 1144 aa14.11□□□□□ -0.15
PUDP-201ENST00000381077 TEX35Q5T0J7 233 aa14.11□□□□□ -0.15
PUDP-201ENST00000381077 CDC42EP5Q6NZY7 148 aa14.11□□□□□ -0.15
PUDP-201ENST00000381077 CERS5Q8N5B7 392 aa14.11□□□□□ -0.15
PUDP-201ENST00000381077 ACRBPQ8NEB7 543 aa14.11□□□□□ -0.15
PUDP-201ENST00000381077 TSG101Q99816 390 aa14.11□□□□□ -0.15
PUDP-201ENST00000381077 ATF5Q9Y2D1 282 aaPredicted RBP14.11□□□□□ -0.15
PUDP-201ENST00000381077 FRMPD2Q68DX3 1309 aaPredicted RBP14.1□□□□□ -0.15
PUDP-201ENST00000381077 CYP3A7-CYP3A51PA0A087WV96 503 aa14.1□□□□□ -0.15
PUDP-201ENST00000381077 B4DLN1 442 aa14.1□□□□□ -0.15
PUDP-201ENST00000381077 RNF225M0QZC1 329 aaPredicted RBP14.1□□□□□ -0.15
PUDP-201ENST00000381077 ERLIN1O75477 346 aa14.1□□□□□ -0.15
PUDP-201ENST00000381077 CYP3A7P24462 503 aa14.1□□□□□ -0.15
PUDP-201ENST00000381077 AMPD2Q01433 879 aa14.1□□□□□ -0.15
PUDP-201ENST00000381077 MIIPQ5JXC2 388 aa14.1□□□□□ -0.15
PUDP-201ENST00000381077 APOBEC3HQ6NTF7 200 aaKnown RBP14.1□□□□□ -0.15
PUDP-201ENST00000381077 WDR59Q6PJI9 974 aa14.1□□□□□ -0.15
PUDP-201ENST00000381077 LRRC47Q8N1G4 583 aaKnown RBP14.1□□□□□ -0.15
PUDP-201ENST00000381077 SNX29Q8TEQ0 813 aa14.1□□□□□ -0.15
PUDP-201ENST00000381077 MBOAT7Q96N66 472 aa14.1□□□□□ -0.15
PUDP-201ENST00000381077 UBXN6Q9BZV1 441 aa14.1□□□□□ -0.15
PUDP-201ENST00000381077 BMP2KQ9NSY1 1161 aaPredicted RBP14.1□□□□□ -0.15
PUDP-201ENST00000381077 DDX25Q9UHL0 483 aaKnown RBP14.1□□□□□ -0.15
PUDP-201ENST00000381077 CTAGE15A4D2H0 777 aa14.09□□□□□ -0.15
PUDP-201ENST00000381077 MYMKA6NI61 221 aa14.09□□□□□ -0.15
PUDP-201ENST00000381077 SLC37A4O43826 429 aa14.09□□□□□ -0.15
PUDP-201ENST00000381077 EDIL3O43854 480 aa14.09□□□□□ -0.15
PUDP-201ENST00000381077 GNA14O95837 355 aa14.09□□□□□ -0.15
PUDP-201ENST00000381077 CTAGE8P0CG41 777 aa14.09□□□□□ -0.15
PUDP-201ENST00000381077 MCM3P25205 808 aa14.09□□□□□ -0.15
PUDP-201ENST00000381077 KRT27Q7Z3Y8 459 aa14.09□□□□□ -0.15
PUDP-201ENST00000381077 CTAGE6Q86UF2 777 aa14.09□□□□□ -0.15
PUDP-201ENST00000381077 CTAGE4Q8IX94 777 aa14.09□□□□□ -0.15
PUDP-201ENST00000381077 COA7Q96BR5 231 aa14.09□□□□□ -0.15
PUDP-201ENST00000381077 PLIN2Q99541 437 aa14.09□□□□□ -0.15
PUDP-201ENST00000381077 SLF1Q9BQI6 1058 aa14.09□□□□□ -0.15
PUDP-201ENST00000381077 PARD6BQ9BYG5 372 aa14.09□□□□□ -0.15
PUDP-201ENST00000381077 IRX2Q9BZI1 471 aaPredicted RBP14.09□□□□□ -0.15
PUDP-201ENST00000381077 NUCKS1Q9H1E3 243 aaKnown RBP14.09□□□□□ -0.15
PUDP-201ENST00000381077 KANSL2Q9H9L4 492 aa14.09□□□□□ -0.15
PUDP-201ENST00000381077 TMEM260Q9NX78 707 aa14.09□□□□□ -0.15
PUDP-201ENST00000381077 PLAGL2Q9UPG8 496 aa14.09□□□□□ -0.15
PUDP-201ENST00000381077 TBX3O15119 743 aa14.09□□□□□ -0.15
PUDP-201ENST00000381077 PLSCR1O15162 318 aa14.09□□□□□ -0.15
PUDP-201ENST00000381077 TDP2O95551 362 aa14.09□□□□□ -0.15
PUDP-201ENST00000381077 TERF2Q15554 542 aa14.09□□□□□ -0.15
PUDP-201ENST00000381077 VWA3BQ502W6 1294 aa14.09□□□□□ -0.15
PUDP-201ENST00000381077 STRIP1Q5VSL9 837 aa14.09□□□□□ -0.15
PUDP-201ENST00000381077 PAPD7Q5XG87 772 aaKnown RBP14.09□□□□□ -0.15
PUDP-201ENST00000381077 SLFN12Q8IYM2 578 aa14.09□□□□□ -0.15
PUDP-201ENST00000381077 CHP1Q99653 195 aa14.09□□□□□ -0.15
PUDP-201ENST00000381077 SEMA6BQ9H3T3 888 aa14.09□□□□□ -0.15
PUDP-201ENST00000381077 PSTPIP2Q9H939 334 aa14.09□□□□□ -0.15
PUDP-201ENST00000381077 PI4KBQ9UBF8 816 aa14.09□□□□□ -0.15
PUDP-201ENST00000381077 MYO6Q9UM54 1294 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms