RNA–Protein interactions for RNA: ENST00000380805.6

GMDS-201, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 1,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-201ENST00000380805 USP17L20D6RJB6 530 aa21.61■■□□□ 1.05
GMDS-201ENST00000380805 PIK3CDO00329 1044 aa21.61■■□□□ 1.05
GMDS-201ENST00000380805 NRDCO43847 1150 aa21.61■■□□□ 1.05
GMDS-201ENST00000380805 FOSP01100 380 aaPredicted RBP21.61■■□□□ 1.05
GMDS-201ENST00000380805 RPS12P25398 132 aaKnown RBP21.61■■□□□ 1.05
GMDS-201ENST00000380805 PPP1R2P41236 205 aa21.61■■□□□ 1.05
GMDS-201ENST00000380805 USP17L24Q0WX57 530 aa21.61■■□□□ 1.05
GMDS-201ENST00000380805 HYIQ5T013 277 aa21.61■■□□□ 1.05
GMDS-201ENST00000380805 C9orf131Q5VYM1 1079 aa21.61■■□□□ 1.05
GMDS-201ENST00000380805 USP17L6PQ6QN14 398 aa21.61■■□□□ 1.05
GMDS-201ENST00000380805 NELFBQ8WX92 580 aa21.61■■□□□ 1.05
GMDS-201ENST00000380805 TMEM39BQ9GZU3 492 aa21.61■■□□□ 1.05
GMDS-201ENST00000380805 RNF181Q9P0P0 153 aa21.61■■□□□ 1.05
GMDS-201ENST00000380805 PRR12Q9ULL5 1215 aa21.61■■□□□ 1.05
GMDS-201ENST00000380805 DCAF8L1A6NGE4 600 aa21.6■■□□□ 1.05
GMDS-201ENST00000380805 ECE1P42892 770 aa21.6■■□□□ 1.05
GMDS-201ENST00000380805 STAT2P52630 851 aa21.6■■□□□ 1.05
GMDS-201ENST00000380805 TNIP1Q15025 636 aa21.6■■□□□ 1.05
GMDS-201ENST00000380805 JDP2Q8WYK2 163 aa21.6■■□□□ 1.05
GMDS-201ENST00000380805 VEZTQ9HBM0 779 aa21.6■■□□□ 1.05
GMDS-201ENST00000380805 MYOZ2Q9NPC6 264 aa21.6■■□□□ 1.05
GMDS-201ENST00000380805 DICER1Q9UPY3 1922 aaKnown RBP21.6■■□□□ 1.05
GMDS-201ENST00000380805 CAP2P40123 477 aa21.6■■□□□ 1.05
GMDS-201ENST00000380805 HSP90AA4PQ58FG1 418 aa21.6■■□□□ 1.05
GMDS-201ENST00000380805 NYAP1Q6ZVC0 841 aa21.6■■□□□ 1.05
GMDS-201ENST00000380805 CCAR2Q8N163 923 aaKnown RBP21.6■■□□□ 1.05
GMDS-201ENST00000380805 ACER1Q8TDN7 264 aa21.6■■□□□ 1.05
GMDS-201ENST00000380805 PLIN2Q99541 437 aa21.6■■□□□ 1.05
GMDS-201ENST00000380805 SH2D4AQ9H788 454 aa21.6■■□□□ 1.05
GMDS-201ENST00000380805 H7C1D1 291 aa21.59■■□□□ 1.05
GMDS-201ENST00000380805 OPLAHO14841 1288 aa21.59■■□□□ 1.05
GMDS-201ENST00000380805 SREBF1P36956 1147 aa21.59■■□□□ 1.05
GMDS-201ENST00000380805 KIAA1755Q5JYT7 1200 aa21.59■■□□□ 1.05
GMDS-201ENST00000380805 KRT79Q5XKE5 535 aa21.59■■□□□ 1.05
GMDS-201ENST00000380805 CDAN1Q8IWY9 1227 aa21.59■■□□□ 1.05
GMDS-201ENST00000380805 CCDC47Q96A33 483 aaKnown RBP21.59■■□□□ 1.05
GMDS-201ENST00000380805 DHTKD1Q96HY7 919 aaPredicted RBP21.59■■□□□ 1.05
GMDS-201ENST00000380805 P2RX7Q99572 595 aaKnown RBP21.59■■□□□ 1.05
GMDS-201ENST00000380805 VCPKMTQ9H867 229 aa21.59■■□□□ 1.05
GMDS-201ENST00000380805 ITIH6Q6UXX5 1313 aa21.59■■□□□ 1.05
GMDS-201ENST00000380805 POTEMA6NI47 508 aa21.58■■□□□ 1.05
GMDS-201ENST00000380805 TBX3O15119 743 aa21.58■■□□□ 1.05
GMDS-201ENST00000380805 STIM1Q13586 685 aa21.58■■□□□ 1.05
GMDS-201ENST00000380805 NBPF9Q3BBW0 867 aa21.58■■□□□ 1.05
GMDS-201ENST00000380805 TMEM139Q8IV31 216 aa21.58■■□□□ 1.05
GMDS-201ENST00000380805 LARP4BQ92615 738 aaKnown RBP21.58■■□□□ 1.05
GMDS-201ENST00000380805 PVALEFA0A1B0GWK0 134 aa21.58■■□□□ 1.04
GMDS-201ENST00000380805 CIITAP33076 1130 aa21.58■■□□□ 1.04
GMDS-201ENST00000380805 Q4G0T1 1027 aa21.58■■□□□ 1.04
GMDS-201ENST00000380805 E4F1Q66K89 784 aaPredicted RBP21.58■■□□□ 1.04
GMDS-201ENST00000380805 SV2BQ7L1I2 683 aa21.58■■□□□ 1.04
GMDS-201ENST00000380805 MYRIPQ8NFW9 859 aa21.58■■□□□ 1.04
GMDS-201ENST00000380805 SNX29Q8TEQ0 813 aa21.58■■□□□ 1.04
GMDS-201ENST00000380805 RAD54LQ92698 747 aa21.58■■□□□ 1.04
GMDS-201ENST00000380805 LRRC27Q9C0I9 530 aa21.58■■□□□ 1.04
GMDS-201ENST00000380805 RANBP17Q9H2T7 1088 aaKnown RBP21.58■■□□□ 1.04
GMDS-201ENST00000380805 KDM3AQ9Y4C1 1321 aa21.57■■□□□ 1.04
GMDS-201ENST00000380805 USP27XA6NNY8 438 aa21.57■■□□□ 1.04
GMDS-201ENST00000380805 PSMA7O14818 248 aa21.57■■□□□ 1.04
GMDS-201ENST00000380805 ASNSP08243 561 aa21.57■■□□□ 1.04
GMDS-201ENST00000380805 ARHGAP4P98171 946 aa21.57■■□□□ 1.04
GMDS-201ENST00000380805 IKQ13123 557 aaPredicted RBP21.57■■□□□ 1.04
GMDS-201ENST00000380805 TPD52L1Q16890 204 aaPredicted RBP21.57■■□□□ 1.04
GMDS-201ENST00000380805 FILIP1LQ4L180 1135 aa21.57■■□□□ 1.04
GMDS-201ENST00000380805 FCHSD1Q86WN1 690 aa21.57■■□□□ 1.04
GMDS-201ENST00000380805 SLFN12Q8IYM2 578 aa21.57■■□□□ 1.04
GMDS-201ENST00000380805 GINM1Q9NU53 330 aa21.57■■□□□ 1.04
GMDS-201ENST00000380805 PCDHA12Q9UN75 941 aa21.57■■□□□ 1.04
GMDS-201ENST00000380805 SMCHD1A6NHR9 2005 aa21.57■■□□□ 1.04
GMDS-201ENST00000380805 FZD9O00144 591 aa21.56■■□□□ 1.04
GMDS-201ENST00000380805 CYP3A4P08684 503 aa21.56■■□□□ 1.04
GMDS-201ENST00000380805 GTF2F1P35269 517 aaKnown RBP eCLIP21.56■■□□□ 1.043e-6■■□□□ 11.7
GMDS-201ENST00000380805 TCP11X2Q5H9J9 407 aa21.56■■□□□ 1.04
GMDS-201ENST00000380805 FAM160B2Q86V87 743 aa21.56■■□□□ 1.04
GMDS-201ENST00000380805 SPICE1Q8N0Z3 855 aa21.56■■□□□ 1.04
GMDS-201ENST00000380805 TC2NQ8N9U0 490 aa21.56■■□□□ 1.04
GMDS-201ENST00000380805 ETNPPLQ8TBG4 499 aa21.56■■□□□ 1.04
GMDS-201ENST00000380805 NOC3LQ8WTT2 800 aaKnown RBP21.56■■□□□ 1.04
GMDS-201ENST00000380805 CHURC1Q8WUH1 139 aa21.56■■□□□ 1.04
GMDS-201ENST00000380805 CDK5RAP3Q96JB5 506 aa21.56■■□□□ 1.04
GMDS-201ENST00000380805 TEPSINQ96N21 525 aa21.56■■□□□ 1.04
GMDS-201ENST00000380805 NUDT12Q9BQG2 462 aa21.56■■□□□ 1.04
GMDS-201ENST00000380805 THAP9Q9H5L6 903 aa21.56■■□□□ 1.04
GMDS-201ENST00000380805 EXOC1Q9NV70 894 aa21.56■■□□□ 1.04
GMDS-201ENST00000380805 PHF20L1A8MW92 1017 aa21.55■■□□□ 1.04
GMDS-201ENST00000380805 ASIC1P78348 528 aa21.55■■□□□ 1.04
GMDS-201ENST00000380805 TNFAIP1Q13829 316 aa21.55■■□□□ 1.04
GMDS-201ENST00000380805 KRT31Q15323 416 aa21.55■■□□□ 1.04
GMDS-201ENST00000380805 FAM83BQ5T0W9 1011 aa21.55■■□□□ 1.04
GMDS-201ENST00000380805 TTI2Q6NXR4 508 aa21.55■■□□□ 1.04
GMDS-201ENST00000380805 UNC13DQ70J99 1090 aa21.55■■□□□ 1.04
GMDS-201ENST00000380805 LENG9Q96B70 501 aa21.55■■□□□ 1.04
GMDS-201ENST00000380805 C16orf45Q96MC5 204 aaPredicted RBP21.55■■□□□ 1.04
GMDS-201ENST00000380805 NT5C3AQ9H0P0 336 aa21.55■■□□□ 1.04
GMDS-201ENST00000380805 SPDYE3A6NKU9 549 aa21.55■■□□□ 1.04
GMDS-201ENST00000380805 TEX33O43247 280 aa21.55■■□□□ 1.04
GMDS-201ENST00000380805 SNAP25P60880 206 aa21.55■■□□□ 1.04
GMDS-201ENST00000380805 EHHADHQ08426 723 aa21.55■■□□□ 1.04
GMDS-201ENST00000380805 PDE4DQ08499 809 aa21.55■■□□□ 1.04
GMDS-201ENST00000380805 USH1GQ495M9 461 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms