RNA–Protein interactions for RNA: ENST00000380445.7

VPS16-202, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS16, Length 2,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-202ENST00000380445 COBLO75128 1261 aa14.12□□□□□ -0.15
VPS16-202ENST00000380445 CASP14P31944 242 aa14.12□□□□□ -0.15
VPS16-202ENST00000380445 UBXN1Q04323 297 aa14.12□□□□□ -0.15
VPS16-202ENST00000380445 GRB10Q13322 594 aa14.12□□□□□ -0.15
VPS16-202ENST00000380445 AP3B2Q13367 1082 aa14.12□□□□□ -0.15
VPS16-202ENST00000380445 CDC37Q16543 378 aaPredicted RBP14.12□□□□□ -0.15
VPS16-202ENST00000380445 RTKN2Q8IZC4 609 aa14.12□□□□□ -0.15
VPS16-202ENST00000380445 SNX29Q8TEQ0 813 aa14.12□□□□□ -0.15
VPS16-202ENST00000380445 CPLX3Q8WVH0 158 aa14.12□□□□□ -0.15
VPS16-202ENST00000380445 P2RX5Q93086 422 aa14.12□□□□□ -0.15
VPS16-202ENST00000380445 SRRTQ9BXP5 876 aaKnown RBP14.12□□□□□ -0.15
VPS16-202ENST00000380445 DNAI1Q9UI46 699 aa14.12□□□□□ -0.15
VPS16-202ENST00000380445 HERC5Q9UII4 1024 aaKnown RBP14.12□□□□□ -0.15
VPS16-202ENST00000380445 EDIL3O43854 480 aa14.11□□□□□ -0.15
VPS16-202ENST00000380445 EZH2Q15910 746 aaKnown RBP14.11□□□□□ -0.15
VPS16-202ENST00000380445 TTI2Q6NXR4 508 aa14.11□□□□□ -0.15
VPS16-202ENST00000380445 TRIM65Q6PJ69 517 aa14.11□□□□□ -0.15
VPS16-202ENST00000380445 CSGALNACT2Q8N6G5 542 aa14.11□□□□□ -0.15
VPS16-202ENST00000380445 CAMKK2Q96RR4 588 aa14.11□□□□□ -0.15
VPS16-202ENST00000380445 AMNQ9BXJ7 453 aa14.11□□□□□ -0.15
VPS16-202ENST00000380445 HDAC9Q9UKV0 1011 aa14.11□□□□□ -0.15
VPS16-202ENST00000380445 PCDHA12Q9UN75 941 aa14.11□□□□□ -0.15
VPS16-202ENST00000380445 A0A1W2PQC6 194 aa14.11□□□□□ -0.15
VPS16-202ENST00000380445 TRIM49BA6NDI0 452 aa14.11□□□□□ -0.15
VPS16-202ENST00000380445 GYPCP04921 128 aa14.11□□□□□ -0.15
VPS16-202ENST00000380445 MAPK8IP2Q13387 824 aaPredicted RBP14.11□□□□□ -0.15
VPS16-202ENST00000380445 CCDC93Q567U6 631 aa14.11□□□□□ -0.15
VPS16-202ENST00000380445 UNC13DQ70J99 1090 aa14.11□□□□□ -0.15
VPS16-202ENST00000380445 IRF2BP1Q8IU81 584 aa14.11□□□□□ -0.15
VPS16-202ENST00000380445 TMTC1Q8IUR5 882 aa14.11□□□□□ -0.15
VPS16-202ENST00000380445 CSRNP1Q96S65 589 aa14.11□□□□□ -0.15
VPS16-202ENST00000380445 NUP88Q99567 741 aaPredicted RBP14.11□□□□□ -0.15
VPS16-202ENST00000380445 NT5C3AQ9H0P0 336 aa14.11□□□□□ -0.15
VPS16-202ENST00000380445 ZNF215Q9UL58 517 aaPredicted RBP14.11□□□□□ -0.15
VPS16-202ENST00000380445 KDM3AQ9Y4C1 1321 aa14.11□□□□□ -0.15
VPS16-202ENST00000380445 C21orf2O43822 256 aa14.11□□□□□ -0.15
VPS16-202ENST00000380445 SLURP2P0DP57 97 aa14.11□□□□□ -0.15
VPS16-202ENST00000380445 TRAF1Q13077 416 aa14.11□□□□□ -0.15
VPS16-202ENST00000380445 MOXD1Q6UVY6 613 aa14.11□□□□□ -0.15
VPS16-202ENST00000380445 TTLL6Q8N841 843 aa14.11□□□□□ -0.15
VPS16-202ENST00000380445 PRMT6Q96LA8 375 aaPredicted RBP14.11□□□□□ -0.15
VPS16-202ENST00000380445 PNMA5Q96PV4 448 aa14.11□□□□□ -0.15
VPS16-202ENST00000380445 BLOC1S4Q9NUP1 217 aa14.11□□□□□ -0.15
VPS16-202ENST00000380445 POTEMA6NI47 508 aa14.1□□□□□ -0.15
VPS16-202ENST00000380445 LGALS16A8MUM7 142 aa14.1□□□□□ -0.15
VPS16-202ENST00000380445 FECHP22830 423 aa14.1□□□□□ -0.15
VPS16-202ENST00000380445 DNM2P50570 870 aa14.1□□□□□ -0.15
VPS16-202ENST00000380445 PMS1P54277 932 aaKnown RBP14.1□□□□□ -0.15
VPS16-202ENST00000380445 PSMD2Q13200 908 aa14.1□□□□□ -0.15
VPS16-202ENST00000380445 TOGARAM2Q6ZUX3 1019 aa14.1□□□□□ -0.15
VPS16-202ENST00000380445 SIAH1Q8IUQ4 282 aa14.1□□□□□ -0.15
VPS16-202ENST00000380445 RAD54LQ92698 747 aa14.1□□□□□ -0.15
VPS16-202ENST00000380445 YDJCA8MPS7 323 aa14.1□□□□□ -0.15
VPS16-202ENST00000380445 GDF11O95390 407 aa14.1□□□□□ -0.15
VPS16-202ENST00000380445 FGFR1OPO95684 399 aaKnown RBP14.1□□□□□ -0.15
VPS16-202ENST00000380445 FOSP01100 380 aaPredicted RBP14.1□□□□□ -0.15
VPS16-202ENST00000380445 EN1Q05925 392 aaPredicted RBP14.1□□□□□ -0.15
VPS16-202ENST00000380445 STK4Q13043 487 aa14.1□□□□□ -0.15
VPS16-202ENST00000380445 IKQ13123 557 aaPredicted RBP14.1□□□□□ -0.15
VPS16-202ENST00000380445 FBXO11Q86XK2 927 aa14.1□□□□□ -0.15
VPS16-202ENST00000380445 OGFOD1Q8N543 542 aa14.1□□□□□ -0.15
VPS16-202ENST00000380445 PSMD1Q99460 953 aa14.1□□□□□ -0.15
VPS16-202ENST00000380445 ANO3Q9BYT9 981 aa14.1□□□□□ -0.15
VPS16-202ENST00000380445 CYP3A7-CYP3A51PA0A087WV96 503 aa14.09□□□□□ -0.15
VPS16-202ENST00000380445 BMP3P12645 472 aa14.09□□□□□ -0.15
VPS16-202ENST00000380445 CYP3A7P24462 503 aa14.09□□□□□ -0.15
VPS16-202ENST00000380445 FXR1P51114 621 aaKnown RBP eCLIP14.09□□□□□ -0.15
VPS16-202ENST00000380445 MCM6Q14566 821 aa14.09□□□□□ -0.15
VPS16-202ENST00000380445 TMEM119Q4V9L6 283 aa14.09□□□□□ -0.15
VPS16-202ENST00000380445 RSBN1LQ6PCB5 846 aaPredicted RBP14.09□□□□□ -0.15
VPS16-202ENST00000380445 TEX2Q8IWB9 1127 aa14.09□□□□□ -0.15
VPS16-202ENST00000380445 SLFN12Q8IYM2 578 aa14.09□□□□□ -0.15
VPS16-202ENST00000380445 MB21D1Q8N884 522 aa14.09□□□□□ -0.15
VPS16-202ENST00000380445 HAS1Q92839 578 aa14.09□□□□□ -0.15
VPS16-202ENST00000380445 VPS33BQ9H267 617 aa14.09□□□□□ -0.15
VPS16-202ENST00000380445 BMP2KQ9NSY1 1161 aaPredicted RBP14.09□□□□□ -0.15
VPS16-202ENST00000380445 ABHD10Q9NUJ1 306 aa14.09□□□□□ -0.15
VPS16-202ENST00000380445 USP17L15C9J2P7 530 aa14.09□□□□□ -0.15
VPS16-202ENST00000380445 USP17L13C9JLJ4 530 aa14.09□□□□□ -0.15
VPS16-202ENST00000380445 USP17L11C9JVI0 530 aa14.09□□□□□ -0.15
VPS16-202ENST00000380445 USP17L18D6R9N7 530 aa14.09□□□□□ -0.15
VPS16-202ENST00000380445 USP17L22D6RA61 530 aa14.09□□□□□ -0.15
VPS16-202ENST00000380445 USP17L17D6RBQ6 530 aa14.09□□□□□ -0.15
VPS16-202ENST00000380445 USP17L19D6RCP7 530 aa14.09□□□□□ -0.15
VPS16-202ENST00000380445 USP17L20D6RJB6 530 aa14.09□□□□□ -0.15
VPS16-202ENST00000380445 NDUFB10O96000 172 aa14.09□□□□□ -0.15
VPS16-202ENST00000380445 GH2P01242 217 aa14.09□□□□□ -0.15
VPS16-202ENST00000380445 USP17L24Q0WX57 530 aa14.09□□□□□ -0.15
VPS16-202ENST00000380445 SYDE2Q5VT97 1194 aa14.09□□□□□ -0.15
VPS16-202ENST00000380445 USP17L6PQ6QN14 398 aa14.09□□□□□ -0.15
VPS16-202ENST00000380445 CYP26C1Q6V0L0 522 aa14.09□□□□□ -0.15
VPS16-202ENST00000380445 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.09□□□□□ -0.15
VPS16-202ENST00000380445 ARHGEF10LQ9HCE6 1279 aa14.09□□□□□ -0.15
VPS16-202ENST00000380445 MYMKA6NI61 221 aa14.08□□□□□ -0.16
VPS16-202ENST00000380445 SOWAHDA6NJG2 315 aa14.08□□□□□ -0.16
VPS16-202ENST00000380445 PES1O00541 588 aaKnown RBP14.08□□□□□ -0.16
VPS16-202ENST00000380445 CASQ1P31415 396 aa14.08□□□□□ -0.16
VPS16-202ENST00000380445 TSR1Q2NL82 804 aaKnown RBP14.08□□□□□ -0.16
VPS16-202ENST00000380445 HYIQ5T013 277 aa14.08□□□□□ -0.16
VPS16-202ENST00000380445 BTNL9Q6UXG8 535 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms