RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 GRB10Q13322 594 aa25.91■■□□□ 1.74
VPS16-201ENST00000380443 KRT31Q15323 416 aa25.91■■□□□ 1.74
VPS16-201ENST00000380443 SYCP1Q15431 976 aa25.91■■□□□ 1.74
VPS16-201ENST00000380443 UBE2SQ16763 222 aa25.91■■□□□ 1.74
VPS16-201ENST00000380443 SYDE2Q5VT97 1194 aa25.91■■□□□ 1.74
VPS16-201ENST00000380443 TMEM139Q8IV31 216 aa25.91■■□□□ 1.74
VPS16-201ENST00000380443 ZNF70Q9UC06 446 aaPredicted RBP25.91■■□□□ 1.74
VPS16-201ENST00000380443 KCNJ18B7U540 433 aa25.91■■□□□ 1.74
VPS16-201ENST00000380443 CTIFO43310 598 aaKnown RBP25.91■■□□□ 1.74
VPS16-201ENST00000380443 TBC1D12O60347 775 aa25.91■■□□□ 1.74
VPS16-201ENST00000380443 GDF11O95390 407 aa25.91■■□□□ 1.74
VPS16-201ENST00000380443 GH2P01242 217 aa25.91■■□□□ 1.74
VPS16-201ENST00000380443 COPB1P53618 953 aaKnown RBP25.91■■□□□ 1.74
VPS16-201ENST00000380443 KCNJ12Q14500 433 aa25.91■■□□□ 1.74
VPS16-201ENST00000380443 MBOAT7Q96N66 472 aa25.91■■□□□ 1.74
VPS16-201ENST00000380443 PLIN2Q99541 437 aa25.91■■□□□ 1.74
VPS16-201ENST00000380443 PSMD14O00487 310 aa25.9■■□□□ 1.74
VPS16-201ENST00000380443 ASIC1P78348 528 aa25.9■■□□□ 1.74
VPS16-201ENST00000380443 SPDYE2Q495Y8 402 aa25.9■■□□□ 1.74
VPS16-201ENST00000380443 FBXO11Q86XK2 927 aa25.9■■□□□ 1.74
VPS16-201ENST00000380443 LRRC15Q8TF66 581 aa25.9■■□□□ 1.74
VPS16-201ENST00000380443 ZNRF3Q9ULT6 936 aa25.9■■□□□ 1.74
VPS16-201ENST00000380443 STK24Q9Y6E0 443 aa25.9■■□□□ 1.74
VPS16-201ENST00000380443 KDM3AQ9Y4C1 1321 aa25.9■■□□□ 1.74
VPS16-201ENST00000380443 N4BP3O15049 544 aa25.89■■□□□ 1.74
VPS16-201ENST00000380443 TEX33O43247 280 aa25.89■■□□□ 1.74
VPS16-201ENST00000380443 MARCH6O60337 910 aa25.89■■□□□ 1.74
VPS16-201ENST00000380443 SLURP2P0DP57 97 aa25.89■■□□□ 1.74
VPS16-201ENST00000380443 PDE4DQ08499 809 aa25.89■■□□□ 1.74
VPS16-201ENST00000380443 TMEM119Q4V9L6 283 aa25.89■■□□□ 1.74
VPS16-201ENST00000380443 FAM83AQ86UY5 434 aa25.89■■□□□ 1.74
VPS16-201ENST00000380443 CNGA4Q8IV77 575 aa25.89■■□□□ 1.74
VPS16-201ENST00000380443 LARP4BQ92615 738 aaKnown RBP25.89■■□□□ 1.74
VPS16-201ENST00000380443 RAD21O60216 631 aa25.88■■□□□ 1.73
VPS16-201ENST00000380443 CCNE1P24864 410 aa25.88■■□□□ 1.73
VPS16-201ENST00000380443 HYIQ5T013 277 aa25.88■■□□□ 1.73
VPS16-201ENST00000380443 FAM114A1Q8IWE2 563 aa25.88■■□□□ 1.73
VPS16-201ENST00000380443 SLFN12Q8IYM2 578 aa25.88■■□□□ 1.73
VPS16-201ENST00000380443 PNMA5Q96PV4 448 aa25.88■■□□□ 1.73
VPS16-201ENST00000380443 ANO3Q9BYT9 981 aa25.88■■□□□ 1.73
VPS16-201ENST00000380443 NT5C3AQ9H0P0 336 aa25.88■■□□□ 1.73
VPS16-201ENST00000380443 PSMD2Q13200 908 aa25.88■■□□□ 1.73
VPS16-201ENST00000380443 UNC13DQ70J99 1090 aa25.88■■□□□ 1.73
VPS16-201ENST00000380443 NIM1KQ8IY84 436 aa25.88■■□□□ 1.73
VPS16-201ENST00000380443 SNX29Q8TEQ0 813 aa25.88■■□□□ 1.73
VPS16-201ENST00000380443 RAD54LQ92698 747 aa25.88■■□□□ 1.73
VPS16-201ENST00000380443 BLOC1S4Q9NUP1 217 aa25.88■■□□□ 1.73
VPS16-201ENST00000380443 PCDHA12Q9UN75 941 aa25.88■■□□□ 1.73
VPS16-201ENST00000380443 TBX3O15119 743 aa25.87■■□□□ 1.73
VPS16-201ENST00000380443 FOXR2Q6PJQ5 311 aa25.87■■□□□ 1.73
VPS16-201ENST00000380443 HAS1Q92839 578 aa25.87■■□□□ 1.73
VPS16-201ENST00000380443 GOPCQ9HD26 462 aa25.87■■□□□ 1.73
VPS16-201ENST00000380443 MAGEC2Q9UBF1 373 aaPredicted RBP25.87■■□□□ 1.73
VPS16-201ENST00000380443 RAD17O75943 681 aa25.86■■□□□ 1.73
VPS16-201ENST00000380443 TTI2Q6NXR4 508 aa25.86■■□□□ 1.73
VPS16-201ENST00000380443 P2RX5Q93086 422 aa25.86■■□□□ 1.73
VPS16-201ENST00000380443 TMX2Q9Y320 296 aa25.86■■□□□ 1.73
VPS16-201ENST00000380443 TCP10L2B9ZVM9 353 aa25.86■■□□□ 1.73
VPS16-201ENST00000380443 MEIS2O14770 477 aa25.86■■□□□ 1.73
VPS16-201ENST00000380443 RRP9O43818 475 aaKnown RBP25.86■■□□□ 1.73
VPS16-201ENST00000380443 SHROOM1Q2M3G4 852 aaPredicted RBP25.86■■□□□ 1.73
VPS16-201ENST00000380443 TRIM47Q96LD4 638 aa25.86■■□□□ 1.73
VPS16-201ENST00000380443 SH2D4AQ9H788 454 aa25.86■■□□□ 1.73
VPS16-201ENST00000380443 KCNMB3Q9NPA1 279 aa25.86■■□□□ 1.73
VPS16-201ENST00000380443 MYH7BA7E2Y1 1941 aa25.85■■□□□ 1.73
VPS16-201ENST00000380443 A0A1W2PQC6 194 aa25.85■■□□□ 1.73
VPS16-201ENST00000380443 PLA2G6O60733 806 aa25.85■■□□□ 1.73
VPS16-201ENST00000380443 ADKP55263 362 aaKnown RBP25.85■■□□□ 1.73
VPS16-201ENST00000380443 IKQ13123 557 aaPredicted RBP25.85■■□□□ 1.73
VPS16-201ENST00000380443 CRYGNQ8WXF5 182 aa25.85■■□□□ 1.73
VPS16-201ENST00000380443 ZNF592Q92610 1267 aa25.85■■□□□ 1.73
VPS16-201ENST00000380443 TAOK3Q9H2K8 898 aa25.85■■□□□ 1.73
VPS16-201ENST00000380443 ZNF277Q9NRM2 450 aaPredicted RBP25.85■■□□□ 1.73
VPS16-201ENST00000380443 FECHP22830 423 aa25.84■■□□□ 1.73
VPS16-201ENST00000380443 Q4G0T1 1027 aa25.84■■□□□ 1.73
VPS16-201ENST00000380443 MAPK8IP1Q9UQF2 711 aa25.84■■□□□ 1.73
VPS16-201ENST00000380443 USP17L15C9J2P7 530 aa25.84■■□□□ 1.73
VPS16-201ENST00000380443 USP17L13C9JLJ4 530 aa25.84■■□□□ 1.73
VPS16-201ENST00000380443 USP17L11C9JVI0 530 aa25.84■■□□□ 1.73
VPS16-201ENST00000380443 USP17L18D6R9N7 530 aa25.84■■□□□ 1.73
VPS16-201ENST00000380443 USP17L22D6RA61 530 aa25.84■■□□□ 1.73
VPS16-201ENST00000380443 USP17L17D6RBQ6 530 aa25.84■■□□□ 1.73
VPS16-201ENST00000380443 USP17L19D6RCP7 530 aa25.84■■□□□ 1.73
VPS16-201ENST00000380443 USP17L20D6RJB6 530 aa25.84■■□□□ 1.73
VPS16-201ENST00000380443 PIK3CDO00329 1044 aa25.84■■□□□ 1.73
VPS16-201ENST00000380443 MFAP3LO75121 409 aa25.84■■□□□ 1.73
VPS16-201ENST00000380443 ETF1P62495 437 aaKnown RBP25.84■■□□□ 1.73
VPS16-201ENST00000380443 RBL2Q08999 1139 aa25.84■■□□□ 1.73
VPS16-201ENST00000380443 USP17L24Q0WX57 530 aa25.84■■□□□ 1.73
VPS16-201ENST00000380443 USP17L6PQ6QN14 398 aa25.84■■□□□ 1.73
VPS16-201ENST00000380443 PHLPP2Q6ZVD8 1323 aa25.84■■□□□ 1.73
VPS16-201ENST00000380443 LTBP3Q9NS15 1303 aa25.84■■□□□ 1.73
VPS16-201ENST00000380443 FER1L6Q2WGJ9 1857 aa25.83■■□□□ 1.73
VPS16-201ENST00000380443 CNTNAP1P78357 1384 aa25.83■■□□□ 1.73
VPS16-201ENST00000380443 POTEMA6NI47 508 aa25.83■■□□□ 1.73
VPS16-201ENST00000380443 JAG1P78504 1218 aa25.83■■□□□ 1.73
VPS16-201ENST00000380443 RRP1BQ14684 758 aaKnown RBP25.83■■□□□ 1.73
VPS16-201ENST00000380443 IRF2BP1Q8IU81 584 aa25.83■■□□□ 1.73
VPS16-201ENST00000380443 REXO1L1PQ8IX06 675 aa25.83■■□□□ 1.73
VPS16-201ENST00000380443 SRRTQ9BXP5 876 aaKnown RBP25.83■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms