RNA–Protein interactions for RNA: ENST00000380324.7

USP3-202, Transcript of ubiquitin specific peptidase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP3, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-202ENST00000380324 ARHGAP4P98171 946 aa13.47□□□□□ -0.25
USP3-202ENST00000380324 STIM1Q13586 685 aa13.47□□□□□ -0.25
USP3-202ENST00000380324 FAM83AQ86UY5 434 aa13.47□□□□□ -0.25
USP3-202ENST00000380324 ADSSL1Q8N142 457 aa13.47□□□□□ -0.25
USP3-202ENST00000380324 MTMR14Q8NCE2 650 aa13.47□□□□□ -0.25
USP3-202ENST00000380324 GIMAP8Q8ND71 665 aaPredicted RBP13.47□□□□□ -0.25
USP3-202ENST00000380324 ZNF592Q92610 1267 aa13.47□□□□□ -0.25
USP3-202ENST00000380324 KIFC2Q96AC6 838 aa13.47□□□□□ -0.25
USP3-202ENST00000380324 PRIMPOLQ96LW4 560 aa13.47□□□□□ -0.25
USP3-202ENST00000380324 BLOC1S4Q9NUP1 217 aa13.47□□□□□ -0.25
USP3-202ENST00000380324 ADD3Q9UEY8 706 aaKnown RBP13.47□□□□□ -0.25
USP3-202ENST00000380324 PCDHA12Q9UN75 941 aa13.47□□□□□ -0.25
USP3-202ENST00000380324 TMX2Q9Y320 296 aa13.47□□□□□ -0.25
USP3-202ENST00000380324 PSMA7O14818 248 aa13.46□□□□□ -0.25
USP3-202ENST00000380324 FCER1AP12319 257 aa13.46□□□□□ -0.25
USP3-202ENST00000380324 RASSF7Q02833 373 aa13.46□□□□□ -0.25
USP3-202ENST00000380324 AP3B2Q13367 1082 aa13.46□□□□□ -0.25
USP3-202ENST00000380324 R3HDM1Q15032 1099 aaKnown RBP13.46□□□□□ -0.25
USP3-202ENST00000380324 KRT31Q15323 416 aa13.46□□□□□ -0.25
USP3-202ENST00000380324 FKBP1CQ5VVH2 108 aa13.46□□□□□ -0.25
USP3-202ENST00000380324 CCDC174Q6PII3 467 aa13.46□□□□□ -0.25
USP3-202ENST00000380324 SV2BQ7L1I2 683 aa13.46□□□□□ -0.25
USP3-202ENST00000380324 DYMQ7RTS9 669 aa13.46□□□□□ -0.25
USP3-202ENST00000380324 KCNK18Q7Z418 384 aa13.46□□□□□ -0.25
USP3-202ENST00000380324 CCDC47Q96A33 483 aaKnown RBP13.46□□□□□ -0.25
USP3-202ENST00000380324 EEF2KMTQ96G04 330 aa13.46□□□□□ -0.25
USP3-202ENST00000380324 CTAGE1Q96RT6 745 aa13.46□□□□□ -0.25
USP3-202ENST00000380324 TAB2Q9NYJ8 693 aa13.46□□□□□ -0.25
USP3-202ENST00000380324 STK17AQ9UEE5 414 aa13.46□□□□□ -0.25
USP3-202ENST00000380324 KCNJ18B7U540 433 aa13.46□□□□□ -0.26
USP3-202ENST00000380324 OPLAHO14841 1288 aa13.46□□□□□ -0.26
USP3-202ENST00000380324 AMPD3Q01432 767 aa13.46□□□□□ -0.26
USP3-202ENST00000380324 TBX2Q13207 712 aaPredicted RBP13.46□□□□□ -0.26
USP3-202ENST00000380324 KCNJ12Q14500 433 aa13.46□□□□□ -0.26
USP3-202ENST00000380324 PRR16Q569H4 304 aa13.46□□□□□ -0.26
USP3-202ENST00000380324 BTNL9Q6UXG8 535 aa13.46□□□□□ -0.26
USP3-202ENST00000380324 CCDC112Q8NEF3 446 aa13.46□□□□□ -0.26
USP3-202ENST00000380324 TRIM47Q96LD4 638 aa13.46□□□□□ -0.26
USP3-202ENST00000380324 CAP2P40123 477 aa13.45□□□□□ -0.26
USP3-202ENST00000380324 STK4Q13043 487 aa13.45□□□□□ -0.26
USP3-202ENST00000380324 PDIA5Q14554 519 aa13.45□□□□□ -0.26
USP3-202ENST00000380324 RASA3Q14644 834 aa13.45□□□□□ -0.26
USP3-202ENST00000380324 PTPN14Q15678 1187 aa13.45□□□□□ -0.26
USP3-202ENST00000380324 ECM1Q16610 540 aa13.45□□□□□ -0.26
USP3-202ENST00000380324 FILIP1LQ4L180 1135 aa13.45□□□□□ -0.26
USP3-202ENST00000380324 ZBED3Q96IU2 234 aaPredicted RBP13.45□□□□□ -0.26
USP3-202ENST00000380324 FEZ1Q99689 392 aa13.45□□□□□ -0.26
USP3-202ENST00000380324 C7orf25Q9BPX7 421 aa13.45□□□□□ -0.26
USP3-202ENST00000380324 VPS16Q9H269 839 aa13.45□□□□□ -0.26
USP3-202ENST00000380324 SYNPO2Q9UMS6 1093 aa13.45□□□□□ -0.26
USP3-202ENST00000380324 MYMKA6NI61 221 aa13.45□□□□□ -0.26
USP3-202ENST00000380324 N4BP3O15049 544 aa13.45□□□□□ -0.26
USP3-202ENST00000380324 STAT3P40763 770 aa13.45□□□□□ -0.26
USP3-202ENST00000380324 TCP11X2Q5H9J9 407 aa13.45□□□□□ -0.26
USP3-202ENST00000380324 FCHSD1Q86WN1 690 aa13.45□□□□□ -0.26
USP3-202ENST00000380324 TC2NQ8N9U0 490 aa13.45□□□□□ -0.26
USP3-202ENST00000380324 ANKRD20A12PQ8NF67 263 aa13.45□□□□□ -0.26
USP3-202ENST00000380324 MYRIPQ8NFW9 859 aa13.45□□□□□ -0.26
USP3-202ENST00000380324 RAD54LQ92698 747 aa13.45□□□□□ -0.26
USP3-202ENST00000380324 PPP1R13BQ96KQ4 1090 aa13.45□□□□□ -0.26
USP3-202ENST00000380324 VCPKMTQ9H867 229 aa13.45□□□□□ -0.26
USP3-202ENST00000380324 FBXO28Q9NVF7 368 aa13.45□□□□□ -0.26
USP3-202ENST00000380324 GJA3Q9Y6H8 435 aa13.45□□□□□ -0.26
USP3-202ENST00000380324 SSBP05455 408 aaKnown RBP eCLIP13.44□□□□□ -0.26
USP3-202ENST00000380324 IDEP14735 1019 aa13.44□□□□□ -0.26
USP3-202ENST00000380324 USP11P51784 963 aa13.44□□□□□ -0.26
USP3-202ENST00000380324 CEP135Q66GS9 1140 aa13.44□□□□□ -0.26
USP3-202ENST00000380324 NYAP1Q6ZVC0 841 aa13.44□□□□□ -0.26
USP3-202ENST00000380324 KIAA0895Q8NCT3 520 aa13.44□□□□□ -0.26
USP3-202ENST00000380324 CPLX3Q8WVH0 158 aa13.44□□□□□ -0.26
USP3-202ENST00000380324 NAP1L4Q99733 375 aaKnown RBP13.44□□□□□ -0.26
USP3-202ENST00000380324 SLC39A2Q9NP94 309 aa13.44□□□□□ -0.26
USP3-202ENST00000380324 KCNMB3Q9NPA1 279 aa13.44□□□□□ -0.26
USP3-202ENST00000380324 ASTN2O75129 1339 aaPredicted RBP13.44□□□□□ -0.26
USP3-202ENST00000380324 POTEB3A0JP26 581 aa13.44□□□□□ -0.26
USP3-202ENST00000380324 POTECB2RU33 542 aa13.44□□□□□ -0.26
USP3-202ENST00000380324 PES1O00541 588 aaKnown RBP13.44□□□□□ -0.26
USP3-202ENST00000380324 RIOK3O14730 519 aaKnown RBP13.44□□□□□ -0.26
USP3-202ENST00000380324 TBC1D12O60347 775 aa13.44□□□□□ -0.26
USP3-202ENST00000380324 CFBP00751 764 aa13.44□□□□□ -0.26
USP3-202ENST00000380324 COPB1P53618 953 aaKnown RBP13.44□□□□□ -0.26
USP3-202ENST00000380324 SPAG1Q07617 926 aa13.44□□□□□ -0.26
USP3-202ENST00000380324 TNIP1Q15025 636 aa13.44□□□□□ -0.26
USP3-202ENST00000380324 TMEM119Q4V9L6 283 aa13.44□□□□□ -0.26
USP3-202ENST00000380324 POTEBQ6S5H4 581 aa13.44□□□□□ -0.26
USP3-202ENST00000380324 SAMD7Q7Z3H4 446 aa13.44□□□□□ -0.26
USP3-202ENST00000380324 TMEM139Q8IV31 216 aa13.44□□□□□ -0.26
USP3-202ENST00000380324 MICALL2Q8IY33 904 aa13.44□□□□□ -0.26
USP3-202ENST00000380324 CRYGNQ8WXF5 182 aa13.44□□□□□ -0.26
USP3-202ENST00000380324 BAG1Q99933 345 aaPredicted RBP13.44□□□□□ -0.26
USP3-202ENST00000380324 ZNF341Q9BYN7 854 aa13.44□□□□□ -0.26
USP3-202ENST00000380324 FAM86B1E9PN63 330 aa13.43□□□□□ -0.26
USP3-202ENST00000380324 ASNSP08243 561 aa13.43□□□□□ -0.26
USP3-202ENST00000380324 FAM86B2P0C5J1 330 aa13.43□□□□□ -0.26
USP3-202ENST00000380324 SREBF1P36956 1147 aa13.43□□□□□ -0.26
USP3-202ENST00000380324 TBC1D10BQ4KMP7 808 aaPredicted RBP13.43□□□□□ -0.26
USP3-202ENST00000380324 CNNM4Q6P4Q7 775 aa13.43□□□□□ -0.26
USP3-202ENST00000380324 TSC1Q92574 1164 aa13.43□□□□□ -0.26
USP3-202ENST00000380324 TMX1Q9H3N1 280 aa13.43□□□□□ -0.26
USP3-202ENST00000380324 SH2D4AQ9H788 454 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms