RNA–Protein interactions for RNA: ENST00000379404.5

SMS-201, Transcript of spermine synthase, humanhuman

TSL 3 BASIC

Gene SMS, Length 1,174 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMS-201ENST00000379404 CALM3P0DP25 149 aa17.05■□□□□ 0.32
SMS-201ENST00000379404 GNAQP50148 359 aa17.05■□□□□ 0.32
SMS-201ENST00000379404 FXR1P51114 621 aaKnown RBP eCLIP17.05■□□□□ 0.32
SMS-201ENST00000379404 PDE4DQ08499 809 aa17.05■□□□□ 0.32
SMS-201ENST00000379404 TRAF1Q13077 416 aa17.05■□□□□ 0.32
SMS-201ENST00000379404 CCDC62Q6P9F0 684 aa17.05■□□□□ 0.32
SMS-201ENST00000379404 ANKRD33Q7Z3H0 272 aa17.05■□□□□ 0.32
SMS-201ENST00000379404 SH3RF1Q7Z6J0 888 aa17.05■□□□□ 0.32
SMS-201ENST00000379404 CMTR1Q8N1G2 835 aaKnown RBP17.05■□□□□ 0.32
SMS-201ENST00000379404 PXMP2Q9NR77 195 aa17.05■□□□□ 0.32
SMS-201ENST00000379404 TRIM43BA6NCK2 446 aa17.04■□□□□ 0.32
SMS-201ENST00000379404 B4DLN1 442 aa17.04■□□□□ 0.32
SMS-201ENST00000379404 ARIH2O95376 493 aa17.04■□□□□ 0.32
SMS-201ENST00000379404 CPA1P15085 419 aa17.04■□□□□ 0.32
SMS-201ENST00000379404 MRPL12P52815 198 aaKnown RBP17.04■□□□□ 0.32
SMS-201ENST00000379404 FSCN1Q16658 493 aaKnown RBP17.04■□□□□ 0.32
SMS-201ENST00000379404 APOA5Q6Q788 366 aa17.04■□□□□ 0.32
SMS-201ENST00000379404 TMTC3Q6ZXV5 915 aa17.04■□□□□ 0.32
SMS-201ENST00000379404 NOL8Q76FK4 1167 aaKnown RBP17.04■□□□□ 0.32
SMS-201ENST00000379404 RAB11FIP4Q86YS3 637 aa17.04■□□□□ 0.32
SMS-201ENST00000379404 SLC43A3Q8NBI5 491 aa17.04■□□□□ 0.32
SMS-201ENST00000379404 TRIM43Q96BQ3 446 aaPredicted RBP17.04■□□□□ 0.32
SMS-201ENST00000379404 TOX2Q96NM4 488 aa17.04■□□□□ 0.32
SMS-201ENST00000379404 MPHOSPH6Q99547 160 aaKnown RBP17.04■□□□□ 0.32
SMS-201ENST00000379404 STARD7Q9NQZ5 370 aa17.04■□□□□ 0.32
SMS-201ENST00000379404 PDLIM7Q9NR12 457 aa17.04■□□□□ 0.32
SMS-201ENST00000379404 GRIN2DO15399 1336 aa17.03■□□□□ 0.32
SMS-201ENST00000379404 A0A1W2PPC1 479 aa17.03■□□□□ 0.32
SMS-201ENST00000379404 REC8O95072 547 aa17.03■□□□□ 0.32
SMS-201ENST00000379404 NR3C2P08235 984 aa17.03■□□□□ 0.32
SMS-201ENST00000379404 HMGB1P09429 215 aaKnown RBP17.03■□□□□ 0.32
SMS-201ENST00000379404 HOXA13P31271 388 aaPredicted RBP17.03■□□□□ 0.32
SMS-201ENST00000379404 FUT2Q10981 343 aa17.03■□□□□ 0.32
SMS-201ENST00000379404 FBXL16Q8N461 479 aa17.03■□□□□ 0.32
SMS-201ENST00000379404 SCFD2Q8WU76 684 aa17.03■□□□□ 0.32
SMS-201ENST00000379404 PIBF1Q8WXW3 757 aa17.03■□□□□ 0.32
SMS-201ENST00000379404 GLT1D1Q96MS3 346 aa17.03■□□□□ 0.32
SMS-201ENST00000379404 USP26Q9BXU7 913 aa17.03■□□□□ 0.32
SMS-201ENST00000379404 AP5M1Q9H0R1 490 aa17.03■□□□□ 0.32
SMS-201ENST00000379404 FAM217BQ9NTX9 383 aaPredicted RBP17.03■□□□□ 0.32
SMS-201ENST00000379404 NKRFO15226 690 aaKnown RBP eCLIP17.02■□□□□ 0.323e-6■■□□□ 12.4
SMS-201ENST00000379404 EIF3JO75822 258 aaKnown RBP17.02■□□□□ 0.32
SMS-201ENST00000379404 RGS20O76081 388 aa17.02■□□□□ 0.32
SMS-201ENST00000379404 SLC34A2O95436 690 aa17.02■□□□□ 0.32
SMS-201ENST00000379404 EIF2AK2P19525 551 aaKnown RBP17.02■□□□□ 0.32
SMS-201ENST00000379404 ITGB8P26012 769 aa17.02■□□□□ 0.32
SMS-201ENST00000379404 FAAP100Q0VG06 881 aa17.02■□□□□ 0.32
SMS-201ENST00000379404 STXBP2Q15833 593 aa17.02■□□□□ 0.32
SMS-201ENST00000379404 ARHGEF16Q5VV41 709 aa17.02■□□□□ 0.32
SMS-201ENST00000379404 CXCL17Q6UXB2 119 aa17.02■□□□□ 0.32
SMS-201ENST00000379404 VSIG10LQ86VR7 867 aa17.02■□□□□ 0.32
SMS-201ENST00000379404 COPS5Q92905 334 aa17.02■□□□□ 0.32
SMS-201ENST00000379404 RRP36Q96EU6 259 aaKnown RBP17.02■□□□□ 0.32
SMS-201ENST00000379404 PDCD2LQ9BRP1 358 aa17.02■□□□□ 0.32
SMS-201ENST00000379404 AGXT2Q9BYV1 514 aa17.02■□□□□ 0.32
SMS-201ENST00000379404 A6NJR5 290 aa17.01■□□□□ 0.31
SMS-201ENST00000379404 GCOM1H8Y6P7 765 aaPredicted RBP17.01■□□□□ 0.31
SMS-201ENST00000379404 ARVCFO00192 962 aa17.01■□□□□ 0.31
SMS-201ENST00000379404 KIAA0355O15063 1070 aa17.01■□□□□ 0.31
SMS-201ENST00000379404 CABYRO75952 493 aa17.01■□□□□ 0.31
SMS-201ENST00000379404 POLR2MP0CAP2 368 aa17.01■□□□□ 0.31
SMS-201ENST00000379404 TXNP10599 105 aaKnown RBP17.01■□□□□ 0.31
SMS-201ENST00000379404 MDM2Q00987 491 aaPredicted RBP17.01■□□□□ 0.31
SMS-201ENST00000379404 MICU3Q86XE3 530 aa17.01■□□□□ 0.31
SMS-201ENST00000379404 JAKMIP1Q96N16 626 aaKnown RBP17.01■□□□□ 0.31
SMS-201ENST00000379404 LAMA3Q16787 3333 aa17.01■□□□□ 0.31
SMS-201ENST00000379404 SZT2Q5T011 3432 aa17.01■□□□□ 0.31
SMS-201ENST00000379404 LTBP2Q14767 1821 aa17■□□□□ 0.31
SMS-201ENST00000379404 FRMPD4Q14CM0 1322 aa17■□□□□ 0.31
SMS-201ENST00000379404 KIAA1217Q5T5P2 1943 aa17■□□□□ 0.31
SMS-201ENST00000379404 A0A0U1RQG5 324 aaPredicted RBP17■□□□□ 0.31
SMS-201ENST00000379404 MEIS2O14770 477 aa17■□□□□ 0.31
SMS-201ENST00000379404 PQBP1O60828 265 aaKnown RBP17■□□□□ 0.31
SMS-201ENST00000379404 CLTBP09497 229 aa17■□□□□ 0.31
SMS-201ENST00000379404 RCAN1P53805 252 aa17■□□□□ 0.31
SMS-201ENST00000379404 TTLL4Q14679 1199 aa17■□□□□ 0.31
SMS-201ENST00000379404 PGM5Q15124 567 aa17■□□□□ 0.31
SMS-201ENST00000379404 PPP2R5BQ15173 497 aa17■□□□□ 0.31
SMS-201ENST00000379404 SEPT14Q6ZU15 432 aa17■□□□□ 0.31
SMS-201ENST00000379404 CCDC82Q8N4S0 544 aa17■□□□□ 0.31
SMS-201ENST00000379404 IL31RAQ8NI17 732 aa17■□□□□ 0.31
SMS-201ENST00000379404 DDX41Q9UJV9 622 aaKnown RBP17■□□□□ 0.31
SMS-201ENST00000379404 hCG_1642624A0A1W2PR95 340 aa16.99■□□□□ 0.31
SMS-201ENST00000379404 PIK3CDO00329 1044 aa16.99■□□□□ 0.31
SMS-201ENST00000379404 ZBTB43O43298 467 aa16.99■□□□□ 0.31
SMS-201ENST00000379404 ZEB2O60315 1214 aa16.99■□□□□ 0.31
SMS-201ENST00000379404 CD4P01730 458 aa16.99■□□□□ 0.31
SMS-201ENST00000379404 RPS6KB1P23443 525 aa16.99■□□□□ 0.31
SMS-201ENST00000379404 CDC27P30260 824 aa16.99■□□□□ 0.31
SMS-201ENST00000379404 PURAQ00577 322 aaKnown RBP16.99■□□□□ 0.31
SMS-201ENST00000379404 LY6KQ17RY6 165 aa16.99■□□□□ 0.31
SMS-201ENST00000379404 SYNE3Q6ZMZ3 975 aa16.99■□□□□ 0.31
SMS-201ENST00000379404 Q6ZUG5 572 aa16.99■□□□□ 0.31
SMS-201ENST00000379404 FAM126BQ8IXS8 530 aa16.99■□□□□ 0.31
SMS-201ENST00000379404 OR6J1Q8NGC5 347 aa16.99■□□□□ 0.31
SMS-201ENST00000379404 RBM28Q9NW13 759 aaKnown RBP16.99■□□□□ 0.31
SMS-201ENST00000379404 TBX21Q9UL17 535 aa16.99■□□□□ 0.31
SMS-201ENST00000379404 CNTNAP5Q8WYK1 1306 aa16.98■□□□□ 0.31
SMS-201ENST00000379404 KLF18A0A0U1RQI7 1052 aa16.98■□□□□ 0.31
SMS-201ENST00000379404 DCDC2CA8MYV0 355 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms