RNA–Protein interactions for RNA: ENST00000378307.9

RAB4B-202, Transcript of RAB4B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB4B, Length 890 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4B-202ENST00000378307 RMDN3Q96TC7 470 aa17.84■□□□□ 0.45
RAB4B-202ENST00000378307 SPZ1Q9BXG8 430 aa17.84■□□□□ 0.45
RAB4B-202ENST00000378307 SPC25Q9HBM1 224 aa17.84■□□□□ 0.45
RAB4B-202ENST00000378307 PDLIM7Q9NR12 457 aa17.84■□□□□ 0.45
RAB4B-202ENST00000378307 SNX14Q9Y5W7 946 aa17.84■□□□□ 0.45
RAB4B-202ENST00000378307 LAMA2P24043 3122 aaKnown RBP17.84■□□□□ 0.45
RAB4B-202ENST00000378307 hCG_1642624A0A1W2PR95 340 aa17.83■□□□□ 0.44
RAB4B-202ENST00000378307 CENPBP07199 599 aaPredicted RBP17.83■□□□□ 0.44
RAB4B-202ENST00000378307 EIF2AK2P19525 551 aaKnown RBP17.83■□□□□ 0.44
RAB4B-202ENST00000378307 BMP8BP34820 402 aa17.83■□□□□ 0.44
RAB4B-202ENST00000378307 CXCL17Q6UXB2 119 aa17.83■□□□□ 0.44
RAB4B-202ENST00000378307 CCDC82Q8N4S0 544 aa17.83■□□□□ 0.44
RAB4B-202ENST00000378307 FANCBQ8NB91 859 aa17.83■□□□□ 0.44
RAB4B-202ENST00000378307 NSUN6Q8TEA1 469 aaKnown RBP17.83■□□□□ 0.44
RAB4B-202ENST00000378307 AP5M1Q9H0R1 490 aa17.83■□□□□ 0.44
RAB4B-202ENST00000378307 PRDM5Q9NQX1 630 aaPredicted RBP17.83■□□□□ 0.44
RAB4B-202ENST00000378307 PXMP2Q9NR77 195 aa17.83■□□□□ 0.44
RAB4B-202ENST00000378307 Q9Y3F1 56 aa17.83■□□□□ 0.44
RAB4B-202ENST00000378307 SLC12A7Q9Y666 1083 aa17.83■□□□□ 0.44
RAB4B-202ENST00000378307 GRIN2DO15399 1336 aa17.82■□□□□ 0.44
RAB4B-202ENST00000378307 ELP1O95163 1332 aa17.82■□□□□ 0.44
RAB4B-202ENST00000378307 PQBP1O60828 265 aaKnown RBP17.82■□□□□ 0.44
RAB4B-202ENST00000378307 SMARCA1P28370 1054 aa17.82■□□□□ 0.44
RAB4B-202ENST00000378307 KIF5BP33176 963 aa17.82■□□□□ 0.44
RAB4B-202ENST00000378307 CDK7P50613 346 aa17.82■□□□□ 0.44
RAB4B-202ENST00000378307 APOA5Q6Q788 366 aa17.82■□□□□ 0.44
RAB4B-202ENST00000378307 MICU3Q86XE3 530 aa17.82■□□□□ 0.44
RAB4B-202ENST00000378307 ZFP91Q96JP5 570 aaPredicted RBP17.82■□□□□ 0.44
RAB4B-202ENST00000378307 GLT1D1Q96MS3 346 aa17.82■□□□□ 0.44
RAB4B-202ENST00000378307 FAAP100Q0VG06 881 aa17.81■□□□□ 0.44
RAB4B-202ENST00000378307 KRT32Q14532 448 aa17.81■□□□□ 0.44
RAB4B-202ENST00000378307 ARHGEF16Q5VV41 709 aa17.81■□□□□ 0.44
RAB4B-202ENST00000378307 CCDC62Q6P9F0 684 aa17.81■□□□□ 0.44
RAB4B-202ENST00000378307 SEPT14Q6ZU15 432 aa17.81■□□□□ 0.44
RAB4B-202ENST00000378307 TMTC3Q6ZXV5 915 aa17.81■□□□□ 0.44
RAB4B-202ENST00000378307 ANKRD33Q7Z3H0 272 aa17.81■□□□□ 0.44
RAB4B-202ENST00000378307 IL31RAQ8NI17 732 aa17.81■□□□□ 0.44
RAB4B-202ENST00000378307 VTI1AQ96AJ9 217 aa17.81■□□□□ 0.44
RAB4B-202ENST00000378307 JAKMIP1Q96N16 626 aaKnown RBP17.81■□□□□ 0.44
RAB4B-202ENST00000378307 IWS1Q96ST2 819 aa17.81■□□□□ 0.44
RAB4B-202ENST00000378307 SOX1O00570 391 aaPredicted RBP17.8■□□□□ 0.44
RAB4B-202ENST00000378307 RGS20O76081 388 aa17.8■□□□□ 0.44
RAB4B-202ENST00000378307 NR3C2P08235 984 aa17.8■□□□□ 0.44
RAB4B-202ENST00000378307 CLTBP09497 229 aa17.8■□□□□ 0.44
RAB4B-202ENST00000378307 CALM1P0DP23 149 aa17.8■□□□□ 0.44
RAB4B-202ENST00000378307 CALM2P0DP24 149 aa17.8■□□□□ 0.44
RAB4B-202ENST00000378307 CALM3P0DP25 149 aa17.8■□□□□ 0.44
RAB4B-202ENST00000378307 TXNP10599 105 aaKnown RBP17.8■□□□□ 0.44
RAB4B-202ENST00000378307 STXBP2Q15833 593 aa17.8■□□□□ 0.44
RAB4B-202ENST00000378307 LY6KQ17RY6 165 aa17.8■□□□□ 0.44
RAB4B-202ENST00000378307 FCHSD1Q86WN1 690 aa17.8■□□□□ 0.44
RAB4B-202ENST00000378307 SCFD2Q8WU76 684 aa17.8■□□□□ 0.44
RAB4B-202ENST00000378307 BADQ92934 168 aa17.8■□□□□ 0.44
RAB4B-202ENST00000378307 RRP36Q96EU6 259 aaKnown RBP17.8■□□□□ 0.44
RAB4B-202ENST00000378307 MPHOSPH6Q99547 160 aaKnown RBP17.8■□□□□ 0.44
RAB4B-202ENST00000378307 LZTS2Q9BRK4 669 aa17.8■□□□□ 0.44
RAB4B-202ENST00000378307 PDCD2LQ9BRP1 358 aa17.8■□□□□ 0.44
RAB4B-202ENST00000378307 UBE2OQ9C0C9 1292 aaKnown RBP17.8■□□□□ 0.44
RAB4B-202ENST00000378307 FAM217BQ9NTX9 383 aaPredicted RBP17.8■□□□□ 0.44
RAB4B-202ENST00000378307 MYH7BA7E2Y1 1941 aa17.8■□□□□ 0.44
RAB4B-202ENST00000378307 A0A0U1RQG5 324 aaPredicted RBP17.79■□□□□ 0.44
RAB4B-202ENST00000378307 GCOM1H8Y6P7 765 aaPredicted RBP17.79■□□□□ 0.44
RAB4B-202ENST00000378307 ARVCFO00192 962 aa17.79■□□□□ 0.44
RAB4B-202ENST00000378307 POLR2MP0CAP2 368 aa17.79■□□□□ 0.44
RAB4B-202ENST00000378307 MYCLP12524 364 aaPredicted RBP17.79■□□□□ 0.44
RAB4B-202ENST00000378307 GNAQP50148 359 aa17.79■□□□□ 0.44
RAB4B-202ENST00000378307 PSMC6P62333 389 aa17.79■□□□□ 0.44
RAB4B-202ENST00000378307 PPP2R5BQ15173 497 aa17.79■□□□□ 0.44
RAB4B-202ENST00000378307 SLC43A3Q8NBI5 491 aa17.79■□□□□ 0.44
RAB4B-202ENST00000378307 OR6J1Q8NGC5 347 aa17.79■□□□□ 0.44
RAB4B-202ENST00000378307 TOX2Q96NM4 488 aa17.79■□□□□ 0.44
RAB4B-202ENST00000378307 USP26Q9BXU7 913 aa17.79■□□□□ 0.44
RAB4B-202ENST00000378307 MAP3K20Q9NYL2 800 aaKnown RBP17.79■□□□□ 0.44
RAB4B-202ENST00000378307 PRKAG2Q9UGJ0 569 aa17.79■□□□□ 0.44
RAB4B-202ENST00000378307 KLF18A0A0U1RQI7 1052 aa17.78■□□□□ 0.44
RAB4B-202ENST00000378307 B4DLN1 442 aa17.78■□□□□ 0.44
RAB4B-202ENST00000378307 MEIS2O14770 477 aa17.78■□□□□ 0.44
RAB4B-202ENST00000378307 REC8O95072 547 aa17.78■□□□□ 0.44
RAB4B-202ENST00000378307 CDC27P30260 824 aa17.78■□□□□ 0.44
RAB4B-202ENST00000378307 MRPL12P52815 198 aaKnown RBP17.78■□□□□ 0.44
RAB4B-202ENST00000378307 FUT2Q10981 343 aa17.78■□□□□ 0.44
RAB4B-202ENST00000378307 TTLL4Q14679 1199 aa17.78■□□□□ 0.44
RAB4B-202ENST00000378307 PGM5Q15124 567 aa17.78■□□□□ 0.44
RAB4B-202ENST00000378307 USP17L6PQ6QN14 398 aa17.78■□□□□ 0.44
RAB4B-202ENST00000378307 Q6ZUG5 572 aa17.78■□□□□ 0.44
RAB4B-202ENST00000378307 SAMD3Q8N6K7 520 aa17.78■□□□□ 0.44
RAB4B-202ENST00000378307 PPP1R13LQ8WUF5 828 aa17.78■□□□□ 0.44
RAB4B-202ENST00000378307 TMEM39AQ9NV64 488 aa17.78■□□□□ 0.44
RAB4B-202ENST00000378307 A0A1W2PPC1 479 aa17.77■□□□□ 0.44
RAB4B-202ENST00000378307 KIAA0355O15063 1070 aa17.77■□□□□ 0.44
RAB4B-202ENST00000378307 NKRFO15226 690 aaKnown RBP eCLIP17.77■□□□□ 0.44
RAB4B-202ENST00000378307 ZBTB43O43298 467 aa17.77■□□□□ 0.44
RAB4B-202ENST00000378307 EIF3JO75822 258 aaKnown RBP17.77■□□□□ 0.44
RAB4B-202ENST00000378307 HMGB1P09429 215 aaKnown RBP17.77■□□□□ 0.44
RAB4B-202ENST00000378307 PURAQ00577 322 aaKnown RBP17.77■□□□□ 0.44
RAB4B-202ENST00000378307 APOBRQ0VD83 1088 aa17.77■□□□□ 0.44
RAB4B-202ENST00000378307 TRAF1Q13077 416 aa17.77■□□□□ 0.44
RAB4B-202ENST00000378307 ITGA7Q13683 1181 aa17.77■□□□□ 0.44
RAB4B-202ENST00000378307 VSIG10LQ86VR7 867 aa17.77■□□□□ 0.44
RAB4B-202ENST00000378307 FAM126BQ8IXS8 530 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms