RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 TSGA10Q9BZW7 698 aa16.05■□□□□ 0.16
TCOF1-202ENST00000377797 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.05■□□□□ 0.16
TCOF1-202ENST00000377797 CTNNA2P26232 953 aa16.05■□□□□ 0.16
TCOF1-202ENST00000377797 CUL4BQ13620 913 aa16.05■□□□□ 0.16
TCOF1-202ENST00000377797 TYW1BQ6NUM6 668 aa16.05■□□□□ 0.16
TCOF1-202ENST00000377797 RGS22Q8NE09 1264 aa16.05■□□□□ 0.16
TCOF1-202ENST00000377797 ZFP91Q96JP5 570 aaPredicted RBP16.05■□□□□ 0.16
TCOF1-202ENST00000377797 PLVAPQ9BX97 442 aa16.05■□□□□ 0.16
TCOF1-202ENST00000377797 ZNF543Q08ER8 600 aa16.05■□□□□ 0.16
TCOF1-202ENST00000377797 BMS1Q14692 1282 aaKnown RBP16.05■□□□□ 0.16
TCOF1-202ENST00000377797 KMT5BQ4FZB7 885 aa16.05■□□□□ 0.16
TCOF1-202ENST00000377797 IWS1Q96ST2 819 aa16.05■□□□□ 0.16
TCOF1-202ENST00000377797 CDC25BP30305 580 aa16.04■□□□□ 0.16
TCOF1-202ENST00000377797 R3HDM1Q15032 1099 aaKnown RBP16.04■□□□□ 0.16
TCOF1-202ENST00000377797 WDR44Q5JSH3 913 aa16.04■□□□□ 0.16
TCOF1-202ENST00000377797 NAPGQ99747 312 aaPredicted RBP16.04■□□□□ 0.16
TCOF1-202ENST00000377797 GDAQ9Y2T3 454 aa16.04■□□□□ 0.16
TCOF1-202ENST00000377797 POLRMTO00411 1230 aaKnown RBP16.04■□□□□ 0.16
TCOF1-202ENST00000377797 POLR3GO15318 223 aaPredicted RBP16.04■□□□□ 0.16
TCOF1-202ENST00000377797 DPEP1P16444 411 aa16.04■□□□□ 0.16
TCOF1-202ENST00000377797 EIF2AK2P19525 551 aaKnown RBP16.04■□□□□ 0.16
TCOF1-202ENST00000377797 TNFAIP3P21580 790 aa16.04■□□□□ 0.16
TCOF1-202ENST00000377797 ATP2C1P98194 919 aaPredicted RBP16.04■□□□□ 0.16
TCOF1-202ENST00000377797 WRNIP1Q96S55 665 aa16.04■□□□□ 0.16
TCOF1-202ENST00000377797 PP2D1A8MPX8 630 aa16.04■□□□□ 0.16
TCOF1-202ENST00000377797 UBE2Q2LH0YL09 131 aa16.04■□□□□ 0.16
TCOF1-202ENST00000377797 K7ENM7 598 aa16.04■□□□□ 0.16
TCOF1-202ENST00000377797 AGXT2Q9BYV1 514 aa16.04■□□□□ 0.16
TCOF1-202ENST00000377797 BCL2L12Q9HB09 334 aa16.04■□□□□ 0.16
TCOF1-202ENST00000377797 TMEM110-MUSTN1A8MSY1 372 aa16.04■□□□□ 0.16
TCOF1-202ENST00000377797 PLA2G4BP0C869 781 aa16.04■□□□□ 0.16
TCOF1-202ENST00000377797 PRPHP41219 470 aa16.04■□□□□ 0.16
TCOF1-202ENST00000377797 DDR1Q08345 913 aa16.04■□□□□ 0.16
TCOF1-202ENST00000377797 SPP2Q13103 211 aa16.04■□□□□ 0.16
TCOF1-202ENST00000377797 SFMBT2Q5VUG0 894 aa16.04■□□□□ 0.16
TCOF1-202ENST00000377797 PAF1Q8N7H5 531 aa16.04■□□□□ 0.16
TCOF1-202ENST00000377797 GOLGA6L10A0A0M3HER8 536 aa16.03■□□□□ 0.16
TCOF1-202ENST00000377797 SPDYE4A6NLX3 237 aa16.03■□□□□ 0.16
TCOF1-202ENST00000377797 KRT5P13647 590 aa16.03■□□□□ 0.16
TCOF1-202ENST00000377797 EEF1GP26641 437 aaKnown RBP16.03■□□□□ 0.16
TCOF1-202ENST00000377797 CASP14P31944 242 aa16.03■□□□□ 0.16
TCOF1-202ENST00000377797 ARHGAP4P98171 946 aa16.03■□□□□ 0.16
TCOF1-202ENST00000377797 GOLGA8FQ08AF8 430 aa16.03■□□□□ 0.16
TCOF1-202ENST00000377797 GOLGA8DPQ0D2H9 430 aa16.03■□□□□ 0.16
TCOF1-202ENST00000377797 LRRC4BQ9NT99 713 aa16.03■□□□□ 0.16
TCOF1-202ENST00000377797 FBXO2Q9UK22 296 aaPredicted RBP16.03■□□□□ 0.16
TCOF1-202ENST00000377797 ADAMTSL3P82987 1691 aa16.03■□□□□ 0.16
TCOF1-202ENST00000377797 GSTTP1A0A1W2PQM5 241 aa16.03■□□□□ 0.16
TCOF1-202ENST00000377797 FOXN1O15353 648 aa16.03■□□□□ 0.16
TCOF1-202ENST00000377797 CCNE1P24864 410 aa16.03■□□□□ 0.16
TCOF1-202ENST00000377797 KIAA0753Q2KHM9 967 aa16.03■□□□□ 0.16
TCOF1-202ENST00000377797 PPP1R18Q6NYC8 613 aa16.03■□□□□ 0.16
TCOF1-202ENST00000377797 LSM14BQ9BX40 385 aaKnown RBP16.03■□□□□ 0.16
TCOF1-202ENST00000377797 CARD6Q9BX69 1037 aa16.03■□□□□ 0.16
TCOF1-202ENST00000377797 MRC1P22897 1456 aa16.03■□□□□ 0.16
TCOF1-202ENST00000377797 CCDC66A2RUB6 948 aa16.03■□□□□ 0.16
TCOF1-202ENST00000377797 ENTPD3O75355 529 aa16.03■□□□□ 0.16
TCOF1-202ENST00000377797 RHOXF2BP0C7M4 288 aa16.03■□□□□ 0.16
TCOF1-202ENST00000377797 FKBP3Q00688 224 aaKnown RBP16.03■□□□□ 0.16
TCOF1-202ENST00000377797 POTEDQ86YR6 584 aa16.03■□□□□ 0.16
TCOF1-202ENST00000377797 ERO1AQ96HE7 468 aa16.03■□□□□ 0.16
TCOF1-202ENST00000377797 RHOXF2Q9BQY4 288 aa16.03■□□□□ 0.16
TCOF1-202ENST00000377797 RWDD2AQ9UIY3 292 aa16.03■□□□□ 0.16
TCOF1-202ENST00000377797 ZHX2Q9Y6X8 837 aa16.03■□□□□ 0.16
TCOF1-202ENST00000377797 ANKRD62A6NC57 917 aa16.03■□□□□ 0.16
TCOF1-202ENST00000377797 TDP2O95551 362 aa16.03■□□□□ 0.16
TCOF1-202ENST00000377797 EVCP57679 992 aa16.03■□□□□ 0.16
TCOF1-202ENST00000377797 RSBN1LQ6PCB5 846 aaPredicted RBP16.03■□□□□ 0.16
TCOF1-202ENST00000377797 SLC16A10Q8TF71 515 aa16.03■□□□□ 0.16
TCOF1-202ENST00000377797 IQCDQ96DY2 449 aa16.03■□□□□ 0.16
TCOF1-202ENST00000377797 NACC1Q96RE7 527 aa16.02■□□□□ 0.16
TCOF1-202ENST00000377797 CNTNAP5Q8WYK1 1306 aa16.02■□□□□ 0.16
TCOF1-202ENST00000377797 PDHBP11177 359 aa16.02■□□□□ 0.16
TCOF1-202ENST00000377797 RASA3Q14644 834 aa16.02■□□□□ 0.16
TCOF1-202ENST00000377797 DPH6Q7L8W6 267 aa16.02■□□□□ 0.16
TCOF1-202ENST00000377797 TAX1BP1Q86VP1 789 aa16.02■□□□□ 0.16
TCOF1-202ENST00000377797 NUCKS1Q9H1E3 243 aaKnown RBP16.02■□□□□ 0.16
TCOF1-202ENST00000377797 PRR29P0C7W0 189 aa16.02■□□□□ 0.15
TCOF1-202ENST00000377797 NR2F2P24468 414 aa16.02■□□□□ 0.15
TCOF1-202ENST00000377797 BHMT2Q9H2M3 363 aa16.02■□□□□ 0.15
TCOF1-202ENST00000377797 SERPINA10Q9UK55 444 aa16.02■□□□□ 0.15
TCOF1-202ENST00000377797 PSMD14O00487 310 aa16.02■□□□□ 0.15
TCOF1-202ENST00000377797 STX10O60499 249 aa16.02■□□□□ 0.15
TCOF1-202ENST00000377797 NEFHP12036 1026 aa16.02■□□□□ 0.15
TCOF1-202ENST00000377797 PPP2R3AQ06190 1150 aa16.02■□□□□ 0.15
TCOF1-202ENST00000377797 IFFO1Q0D2I5 559 aa16.02■□□□□ 0.15
TCOF1-202ENST00000377797 DEPTORQ8TB45 409 aa16.02■□□□□ 0.15
TCOF1-202ENST00000377797 RTFDC1Q9BY42 306 aaPredicted RBP16.02■□□□□ 0.15
TCOF1-202ENST00000377797 RIC8AQ9NPQ8 531 aa16.02■□□□□ 0.15
TCOF1-202ENST00000377797 PPP2R2CQ9Y2T4 447 aa16.02■□□□□ 0.15
TCOF1-202ENST00000377797 NDUFB10O96000 172 aa16.01■□□□□ 0.15
TCOF1-202ENST00000377797 NFIAQ12857 509 aa16.01■□□□□ 0.15
TCOF1-202ENST00000377797 ARHGAP44Q17R89 818 aa16.01■□□□□ 0.15
TCOF1-202ENST00000377797 SECISBP2LQ93073 1101 aaKnown RBP16.01■□□□□ 0.15
TCOF1-202ENST00000377797 METTL14Q9HCE5 456 aaKnown RBP16.01■□□□□ 0.15
TCOF1-202ENST00000377797 KCNG1Q9UIX4 513 aa16.01■□□□□ 0.15
TCOF1-202ENST00000377797 IFIH1Q9BYX4 1025 aaKnown RBP16.01■□□□□ 0.15
TCOF1-202ENST00000377797 ETF1P62495 437 aaKnown RBP16.01■□□□□ 0.15
TCOF1-202ENST00000377797 ST3GAL1Q11201 340 aa16.01■□□□□ 0.15
TCOF1-202ENST00000377797 KCTD2Q14681 263 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms