RNA–Protein interactions for RNA: ENST00000377394.7

SF1-205, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 2,854 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-205ENST00000377394 ATP1A1P05023 1023 aaKnown RBP15.38■□□□□ 0.05
SF1-205ENST00000377394 TUBBP07437 444 aa15.38■□□□□ 0.05
SF1-205ENST00000377394 GNGT1P63211 74 aa15.38■□□□□ 0.05
SF1-205ENST00000377394 TSR1Q2NL82 804 aaKnown RBP15.38■□□□□ 0.05
SF1-205ENST00000377394 PAPD7Q5XG87 772 aaKnown RBP15.38■□□□□ 0.05
SF1-205ENST00000377394 EEF2KMTQ96G04 330 aa15.38■□□□□ 0.05
SF1-205ENST00000377394 GRIN2DO15399 1336 aa15.38■□□□□ 0.05
SF1-205ENST00000377394 RPS6KA4O75676 772 aa15.38■□□□□ 0.05
SF1-205ENST00000377394 BRD2P25440 801 aaKnown RBP15.38■□□□□ 0.05
SF1-205ENST00000377394 PDE4DQ08499 809 aa15.38■□□□□ 0.05
SF1-205ENST00000377394 CCDC122Q5T0U0 273 aa15.38■□□□□ 0.05
SF1-205ENST00000377394 RC3H1Q5TC82 1133 aaKnown RBP15.38■□□□□ 0.05
SF1-205ENST00000377394 GBP6Q6ZN66 633 aa15.38■□□□□ 0.05
SF1-205ENST00000377394 PRPF38AQ8NAV1 312 aaKnown RBP15.38■□□□□ 0.05
SF1-205ENST00000377394 CAPZA3Q96KX2 299 aa15.38■□□□□ 0.05
SF1-205ENST00000377394 CRACR2AQ9BSW2 395 aa15.38■□□□□ 0.05
SF1-205ENST00000377394 RCCD1A6NED2 376 aa15.38■□□□□ 0.05
SF1-205ENST00000377394 ECM2O94769 699 aaPredicted RBP15.38■□□□□ 0.05
SF1-205ENST00000377394 KRT83P78385 493 aa15.38■□□□□ 0.05
SF1-205ENST00000377394 LETM2Q2VYF4 491 aa15.38■□□□□ 0.05
SF1-205ENST00000377394 MIIPQ5JXC2 388 aa15.38■□□□□ 0.05
SF1-205ENST00000377394 KRT25Q7Z3Z0 450 aa15.38■□□□□ 0.05
SF1-205ENST00000377394 MAPKAPK5Q8IW41 473 aa15.38■□□□□ 0.05
SF1-205ENST00000377394 RETREG2Q8NC44 543 aa15.38■□□□□ 0.05
SF1-205ENST00000377394 CNOT6LQ96LI5 555 aaKnown RBP15.38■□□□□ 0.05
SF1-205ENST00000377394 MMTAG2Q9BU76 263 aaKnown RBP15.38■□□□□ 0.05
SF1-205ENST00000377394 NUP58Q9BVL2 599 aa15.38■□□□□ 0.05
SF1-205ENST00000377394 CAPS2Q9BXY5 557 aa15.38■□□□□ 0.05
SF1-205ENST00000377394 SAP30BPQ9UHR5 308 aaKnown RBP15.38■□□□□ 0.05
SF1-205ENST00000377394 NKRFO15226 690 aaKnown RBP eCLIP15.37■□□□□ 0.058e-7■■■□□ 14.6
SF1-205ENST00000377394 CCNT1O60563 726 aaKnown RBP15.37■□□□□ 0.05
SF1-205ENST00000377394 BAG3O95817 575 aa15.37■□□□□ 0.05
SF1-205ENST00000377394 FCER1AP12319 257 aa15.37■□□□□ 0.05
SF1-205ENST00000377394 USP8P40818 1118 aa15.37■□□□□ 0.05
SF1-205ENST00000377394 NAPAP54920 295 aa15.37■□□□□ 0.05
SF1-205ENST00000377394 GSTO1P78417 241 aa15.37■□□□□ 0.05
SF1-205ENST00000377394 ATP2B2Q01814 1243 aa15.37■□□□□ 0.05
SF1-205ENST00000377394 TBC1D8BQ0IIM8 1120 aa15.37■□□□□ 0.05
SF1-205ENST00000377394 ZSCAN29Q8IWY8 852 aaPredicted RBP15.37■□□□□ 0.05
SF1-205ENST00000377394 DHX37Q8IY37 1157 aaKnown RBP15.37■□□□□ 0.05
SF1-205ENST00000377394 AMOTL1Q8IY63 956 aa15.37■□□□□ 0.05
SF1-205ENST00000377394 LACRTQ9GZZ8 138 aa15.37■□□□□ 0.05
SF1-205ENST00000377394 SNED1Q8TER0 1413 aa15.37■□□□□ 0.05
SF1-205ENST00000377394 SBF2Q86WG5 1849 aa15.37■□□□□ 0.05
SF1-205ENST00000377394 BICDL2A1A5D9 508 aa15.37■□□□□ 0.05
SF1-205ENST00000377394 FNTAP49354 379 aa15.37■□□□□ 0.05
SF1-205ENST00000377394 ZBED6P86452 979 aa15.37■□□□□ 0.05
SF1-205ENST00000377394 NONOQ15233 471 aaKnown RBP eCLIP15.37■□□□□ 0.051e-6■■■■■ 28.9
SF1-205ENST00000377394 AMIGO3Q86WK7 504 aa15.37■□□□□ 0.05
SF1-205ENST00000377394 SELENOOQ9BVL4 669 aa15.37■□□□□ 0.05
SF1-205ENST00000377394 NHEJ1Q9H9Q4 299 aaPredicted RBP15.37■□□□□ 0.05
SF1-205ENST00000377394 SAR1BQ9Y6B6 198 aa15.37■□□□□ 0.05
SF1-205ENST00000377394 MYH1P12882 1939 aa15.36■□□□□ 0.05
SF1-205ENST00000377394 SMCO2A6NFE2 343 aa15.36■□□□□ 0.05
SF1-205ENST00000377394 EIF3HO15372 352 aaKnown RBP eCLIP15.36■□□□□ 0.056e-9■□□□□ 8.2
SF1-205ENST00000377394 ZPR1O75312 459 aa15.36■□□□□ 0.05
SF1-205ENST00000377394 TRIM21P19474 475 aaKnown RBP15.36■□□□□ 0.05
SF1-205ENST00000377394 JAKMIP2Q96AA8 810 aa15.36■□□□□ 0.05
SF1-205ENST00000377394 RTFDC1Q9BY42 306 aaPredicted RBP15.36■□□□□ 0.05
SF1-205ENST00000377394 ANKIB1Q9P2G1 1089 aa15.36■□□□□ 0.05
SF1-205ENST00000377394 NAV1Q8NEY1 1877 aa15.36■□□□□ 0.05
SF1-205ENST00000377394 H0YHG0 523 aa15.36■□□□□ 0.05
SF1-205ENST00000377394 ASIC1P78348 528 aa15.36■□□□□ 0.05
SF1-205ENST00000377394 POTEDQ86YR6 584 aa15.36■□□□□ 0.05
SF1-205ENST00000377394 CCDC170Q8IYT3 715 aa15.36■□□□□ 0.05
SF1-205ENST00000377394 KIAA0895Q8NCT3 520 aa15.36■□□□□ 0.05
SF1-205ENST00000377394 CABS1Q96KC9 395 aa15.36■□□□□ 0.05
SF1-205ENST00000377394 LEMD3Q9Y2U8 911 aa15.36■□□□□ 0.05
SF1-205ENST00000377394 TNRC6CQ9HCJ0 1690 aaKnown RBP15.36■□□□□ 0.05
SF1-205ENST00000377394 SHTN1A0MZ66 631 aa15.35■□□□□ 0.05
SF1-205ENST00000377394 CYLC1P35663 651 aaPredicted RBP15.35■□□□□ 0.05
SF1-205ENST00000377394 TECP42680 631 aa15.35■□□□□ 0.05
SF1-205ENST00000377394 PPFIA1Q13136 1202 aa15.35■□□□□ 0.05
SF1-205ENST00000377394 COBLL1Q53SF7 1204 aa15.35■□□□□ 0.05
SF1-205ENST00000377394 NEK8Q86SG6 692 aa15.35■□□□□ 0.05
SF1-205ENST00000377394 KIAA1328Q86T90 577 aa15.35■□□□□ 0.05
SF1-205ENST00000377394 PURBQ96QR8 312 aaKnown RBP15.35■□□□□ 0.05
SF1-205ENST00000377394 ERGIC2Q96RQ1 377 aa15.35■□□□□ 0.05
SF1-205ENST00000377394 GNPATO15228 680 aa15.35■□□□□ 0.05
SF1-205ENST00000377394 KRT86O43790 486 aa15.35■□□□□ 0.05
SF1-205ENST00000377394 CDK8P49336 464 aa15.35■□□□□ 0.05
SF1-205ENST00000377394 CDK17Q00537 523 aa15.35■□□□□ 0.05
SF1-205ENST00000377394 NFIXQ14938 502 aa15.35■□□□□ 0.05
SF1-205ENST00000377394 PPP2R5AQ15172 486 aa15.35■□□□□ 0.05
SF1-205ENST00000377394 FIGNQ5HY92 759 aa15.35■□□□□ 0.05
SF1-205ENST00000377394 USP17L2Q6R6M4 530 aa15.35■□□□□ 0.05
SF1-205ENST00000377394 C16orf86Q6ZW13 317 aa15.35■□□□□ 0.05
SF1-205ENST00000377394 FAM114A1Q8IWE2 563 aa15.35■□□□□ 0.05
SF1-205ENST00000377394 EHBP1Q8NDI1 1231 aa15.35■□□□□ 0.05
SF1-205ENST00000377394 NEDD1Q8NHV4 660 aa15.35■□□□□ 0.05
SF1-205ENST00000377394 HPS3Q969F9 1004 aa15.35■□□□□ 0.05
SF1-205ENST00000377394 ZKSCAN4Q969J2 545 aaPredicted RBP15.35■□□□□ 0.05
SF1-205ENST00000377394 CCDC47Q96A33 483 aaKnown RBP15.35■□□□□ 0.05
SF1-205ENST00000377394 NOC4LQ9BVI4 516 aaKnown RBP15.35■□□□□ 0.05
SF1-205ENST00000377394 SEMA6BQ9H3T3 888 aa15.35■□□□□ 0.05
SF1-205ENST00000377394 C6orf50Q9HD87 102 aa15.35■□□□□ 0.05
SF1-205ENST00000377394 A0A1W2PQJ5 194 aa15.34■□□□□ 0.05
SF1-205ENST00000377394 GOLGA6BA6NDN3 693 aa15.34■□□□□ 0.05
SF1-205ENST00000377394 NUTM2BA6NNL0 878 aaPredicted RBP15.34■□□□□ 0.05
SF1-205ENST00000377394 NUTM2EB1AL46 878 aaPredicted RBP15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms