RNA–Protein interactions for RNA: ENST00000376570.8

DDR1-227, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-227ENST00000376570 TBC1D5Q92609 795 aa12.96□□□□□ -0.33
DDR1-227ENST00000376570 NAPGQ99747 312 aaPredicted RBP12.96□□□□□ -0.33
DDR1-227ENST00000376570 CCDC113Q9H0I3 377 aa12.96□□□□□ -0.33
DDR1-227ENST00000376570 MLXIPQ9HAP2 919 aa12.96□□□□□ -0.33
DDR1-227ENST00000376570 INTS13Q9NVM9 706 aa12.96□□□□□ -0.33
DDR1-227ENST00000376570 CHORDC1Q9UHD1 332 aaPredicted RBP12.96□□□□□ -0.33
DDR1-227ENST00000376570 HPSEQ9Y251 543 aa12.96□□□□□ -0.33
DDR1-227ENST00000376570 CCDC169A6NNP5 214 aa12.96□□□□□ -0.34
DDR1-227ENST00000376570 ECE2O60344 883 aa12.96□□□□□ -0.34
DDR1-227ENST00000376570 GABPB1Q06547 395 aaPredicted RBP12.96□□□□□ -0.34
DDR1-227ENST00000376570 DGKZQ13574 1117 aa12.96□□□□□ -0.34
DDR1-227ENST00000376570 BHMT2Q9H2M3 363 aa12.96□□□□□ -0.34
DDR1-227ENST00000376570 BARHL2Q9NY43 387 aa12.96□□□□□ -0.34
DDR1-227ENST00000376570 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.96□□□□□ -0.34
DDR1-227ENST00000376570 TESPA1A2RU30 521 aaPredicted RBP12.95□□□□□ -0.34
DDR1-227ENST00000376570 DDTLA6NHG4 134 aaPredicted RBP12.95□□□□□ -0.34
DDR1-227ENST00000376570 LRRN2O75325 713 aa12.95□□□□□ -0.34
DDR1-227ENST00000376570 MOCS3O95396 460 aa12.95□□□□□ -0.34
DDR1-227ENST00000376570 FTCDO95954 541 aa12.95□□□□□ -0.34
DDR1-227ENST00000376570 GRM1Q13255 1194 aa12.95□□□□□ -0.34
DDR1-227ENST00000376570 FAM83BQ5T0W9 1011 aa12.95□□□□□ -0.34
DDR1-227ENST00000376570 RBM43Q6ZSC3 357 aaKnown RBP12.95□□□□□ -0.34
DDR1-227ENST00000376570 ZNF512BQ96KM6 892 aaPredicted RBP12.95□□□□□ -0.34
DDR1-227ENST00000376570 SLIT3O75094 1523 aa12.95□□□□□ -0.34
DDR1-227ENST00000376570 STXBP3O00186 592 aa12.95□□□□□ -0.34
DDR1-227ENST00000376570 LONP1P36776 959 aaKnown RBP12.95□□□□□ -0.34
DDR1-227ENST00000376570 ZNF658Q5TYW1 1059 aaPredicted RBP12.95□□□□□ -0.34
DDR1-227ENST00000376570 FBXO11Q86XK2 927 aa12.95□□□□□ -0.34
DDR1-227ENST00000376570 NLGN1Q8N2Q7 840 aa12.95□□□□□ -0.34
DDR1-227ENST00000376570 ANKRD7Q92527 254 aa12.95□□□□□ -0.34
DDR1-227ENST00000376570 CCDC127Q96BQ5 260 aa12.95□□□□□ -0.34
DDR1-227ENST00000376570 IFIH1Q9BYX4 1025 aaKnown RBP12.95□□□□□ -0.34
DDR1-227ENST00000376570 SEMA3EO15041 775 aa12.95□□□□□ -0.34
DDR1-227ENST00000376570 ATP2C2O75185 946 aa12.95□□□□□ -0.34
DDR1-227ENST00000376570 GRM4Q14833 912 aa12.95□□□□□ -0.34
DDR1-227ENST00000376570 FAM26FQ5R3K3 315 aa12.95□□□□□ -0.34
DDR1-227ENST00000376570 CNNM4Q6P4Q7 775 aa12.95□□□□□ -0.34
DDR1-227ENST00000376570 UHMK1Q8TAS1 419 aaKnown RBP12.95□□□□□ -0.34
DDR1-227ENST00000376570 TAF4BQ92750 862 aa12.95□□□□□ -0.34
DDR1-227ENST00000376570 P2RX5Q93086 422 aa12.95□□□□□ -0.34
DDR1-227ENST00000376570 IKZF4Q9H2S9 585 aa12.95□□□□□ -0.34
DDR1-227ENST00000376570 ZNF408Q9H9D4 720 aa12.95□□□□□ -0.34
DDR1-227ENST00000376570 CHD2O14647 1828 aaKnown RBP12.95□□□□□ -0.34
DDR1-227ENST00000376570 F5H6K3 240 aa12.94□□□□□ -0.34
DDR1-227ENST00000376570 RNF225M0QZC1 329 aaPredicted RBP12.94□□□□□ -0.34
DDR1-227ENST00000376570 KRT86O43790 486 aa12.94□□□□□ -0.34
DDR1-227ENST00000376570 PDHBP11177 359 aa12.94□□□□□ -0.34
DDR1-227ENST00000376570 HNRNPH2P55795 449 aaKnown RBP12.94□□□□□ -0.34
DDR1-227ENST00000376570 KLRC3Q07444 240 aa12.94□□□□□ -0.34
DDR1-227ENST00000376570 PPP2R5BQ15173 497 aa12.94□□□□□ -0.34
DDR1-227ENST00000376570 BICD1Q96G01 975 aa12.94□□□□□ -0.34
DDR1-227ENST00000376570 GINS2Q9Y248 185 aa12.94□□□□□ -0.34
DDR1-227ENST00000376570 STK36Q9NRP7 1315 aa12.94□□□□□ -0.34
DDR1-227ENST00000376570 RBAK-RBAKDNI3L0D1 243 aa12.94□□□□□ -0.34
DDR1-227ENST00000376570 ERLIN1O75477 346 aa12.94□□□□□ -0.34
DDR1-227ENST00000376570 CDC25BP30305 580 aa12.94□□□□□ -0.34
DDR1-227ENST00000376570 GUCY2FP51841 1108 aa12.94□□□□□ -0.34
DDR1-227ENST00000376570 C2orf54Q08AI8 447 aa12.94□□□□□ -0.34
DDR1-227ENST00000376570 CTNNBL1Q8WYA6 563 aaPredicted RBP12.94□□□□□ -0.34
DDR1-227ENST00000376570 JDP2Q8WYK2 163 aa12.94□□□□□ -0.34
DDR1-227ENST00000376570 PARD6BQ9BYG5 372 aa12.94□□□□□ -0.34
DDR1-227ENST00000376570 MTMR4Q9NYA4 1195 aa12.94□□□□□ -0.34
DDR1-227ENST00000376570 MFAP3LO75121 409 aa12.94□□□□□ -0.34
DDR1-227ENST00000376570 ALDH1B1P30837 517 aa12.94□□□□□ -0.34
DDR1-227ENST00000376570 SSTR3P32745 418 aaPredicted RBP12.94□□□□□ -0.34
DDR1-227ENST00000376570 ADAM9Q13443 819 aa12.94□□□□□ -0.34
DDR1-227ENST00000376570 TAX1BP1Q86VP1 789 aa12.94□□□□□ -0.34
DDR1-227ENST00000376570 CERS5Q8N5B7 392 aa12.94□□□□□ -0.34
DDR1-227ENST00000376570 FAM133AQ8N9E0 248 aa12.94□□□□□ -0.34
DDR1-227ENST00000376570 ACER1Q8TDN7 264 aa12.94□□□□□ -0.34
DDR1-227ENST00000376570 RTFDC1Q9BY42 306 aaPredicted RBP12.94□□□□□ -0.34
DDR1-227ENST00000376570 OSBPL5Q9H0X9 879 aaPredicted RBP12.94□□□□□ -0.34
DDR1-227ENST00000376570 CWC15Q9P013 229 aaKnown RBP12.94□□□□□ -0.34
DDR1-227ENST00000376570 EP400Q96L91 3159 aa12.93□□□□□ -0.34
DDR1-227ENST00000376570 GOLGA8IPA6NC78 632 aa12.93□□□□□ -0.34
DDR1-227ENST00000376570 GOLGA8JA6NMD2 632 aa12.93□□□□□ -0.34
DDR1-227ENST00000376570 PPP1R3GB7ZBB8 358 aa12.93□□□□□ -0.34
DDR1-227ENST00000376570 ZBTB39O15060 712 aa12.93□□□□□ -0.34
DDR1-227ENST00000376570 ORC4O43929 436 aa12.93□□□□□ -0.34
DDR1-227ENST00000376570 STX10O60499 249 aa12.93□□□□□ -0.34
DDR1-227ENST00000376570 GYPCP04921 128 aa12.93□□□□□ -0.34
DDR1-227ENST00000376570 EIF2AK2P19525 551 aaKnown RBP12.93□□□□□ -0.34
DDR1-227ENST00000376570 ODF2Q5BJF6 829 aa12.93□□□□□ -0.34
DDR1-227ENST00000376570 MYOCDQ8IZQ8 938 aa12.93□□□□□ -0.34
DDR1-227ENST00000376570 AFDNP55196 1824 aaKnown RBP12.93□□□□□ -0.34
DDR1-227ENST00000376570 BICDL2A1A5D9 508 aa12.93□□□□□ -0.34
DDR1-227ENST00000376570 MYMKA6NI61 221 aa12.93□□□□□ -0.34
DDR1-227ENST00000376570 BACH1O14867 736 aa12.93□□□□□ -0.34
DDR1-227ENST00000376570 PAFAH1B1P43034 410 aa12.93□□□□□ -0.34
DDR1-227ENST00000376570 FAM114A1Q8IWE2 563 aa12.93□□□□□ -0.34
DDR1-227ENST00000376570 CCDC65Q8IXS2 484 aa12.93□□□□□ -0.34
DDR1-227ENST00000376570 PPP1R16BQ96T49 567 aa12.93□□□□□ -0.34
DDR1-227ENST00000376570 DNM3Q9UQ16 869 aa12.93□□□□□ -0.34
DDR1-227ENST00000376570 HGSO14964 777 aaPredicted RBP12.93□□□□□ -0.34
DDR1-227ENST00000376570 ERCC5P28715 1186 aaPredicted RBP12.93□□□□□ -0.34
DDR1-227ENST00000376570 PDE6BP35913 854 aa12.93□□□□□ -0.34
DDR1-227ENST00000376570 EIF4A3P38919 411 aaKnown RBP12.93□□□□□ -0.34
DDR1-227ENST00000376570 SMC1AQ14683 1233 aaKnown RBP12.93□□□□□ -0.34
DDR1-227ENST00000376570 TMEM39BQ9GZU3 492 aa12.93□□□□□ -0.34
DDR1-227ENST00000376570 STK32BQ9NY57 414 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms