RNA–Protein interactions for RNA: ENST00000376061.8

PDPN-203, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-203ENST00000376061 TOMM70O94826 608 aa11.9□□□□□ -0.5
PDPN-203ENST00000376061 TDP2O95551 362 aa11.9□□□□□ -0.5
PDPN-203ENST00000376061 SLC10A3P09131 477 aa11.9□□□□□ -0.5
PDPN-203ENST00000376061 LIG1P18858 919 aa11.9□□□□□ -0.5
PDPN-203ENST00000376061 OSBPP22059 807 aa11.9□□□□□ -0.5
PDPN-203ENST00000376061 PTPREP23469 700 aa11.9□□□□□ -0.5
PDPN-203ENST00000376061 SREBF1P36956 1147 aa11.9□□□□□ -0.5
PDPN-203ENST00000376061 ZNF157P51786 506 aaPredicted RBP11.9□□□□□ -0.5
PDPN-203ENST00000376061 ARHGAP4P98171 946 aa11.9□□□□□ -0.5
PDPN-203ENST00000376061 PTGDRQ13258 359 aa11.9□□□□□ -0.5
PDPN-203ENST00000376061 ORC2Q13416 577 aaPredicted RBP11.9□□□□□ -0.5
PDPN-203ENST00000376061 TKFCQ3LXA3 575 aa11.9□□□□□ -0.5
PDPN-203ENST00000376061 RGMBQ6NW40 437 aa11.9□□□□□ -0.5
PDPN-203ENST00000376061 SLC30A10Q6XR72 485 aa11.9□□□□□ -0.5
PDPN-203ENST00000376061 ANKRD23Q86SG2 305 aa11.9□□□□□ -0.5
PDPN-203ENST00000376061 FCHSD1Q86WN1 690 aa11.9□□□□□ -0.5
PDPN-203ENST00000376061 MCF2L2Q86YR7 1114 aa11.9□□□□□ -0.5
PDPN-203ENST00000376061 C4orf32Q8N8J7 132 aa11.9□□□□□ -0.5
PDPN-203ENST00000376061 KRI1Q8N9T8 703 aaKnown RBP11.9□□□□□ -0.5
PDPN-203ENST00000376061 BBXQ8WY36 941 aaPredicted RBP11.9□□□□□ -0.5
PDPN-203ENST00000376061 COL20A1Q9P218 1284 aa11.9□□□□□ -0.5
PDPN-203ENST00000376061 PNMA3Q9UL41 463 aa11.9□□□□□ -0.5
PDPN-203ENST00000376061 SLC45A1Q9Y2W3 748 aa11.9□□□□□ -0.5
PDPN-203ENST00000376061 PLXNB2O15031 1838 aa11.89□□□□□ -0.51
PDPN-203ENST00000376061 PDHXO00330 501 aa11.89□□□□□ -0.51
PDPN-203ENST00000376061 CCNT1O60563 726 aaKnown RBP11.89□□□□□ -0.51
PDPN-203ENST00000376061 CUTAO60888 179 aa11.89□□□□□ -0.51
PDPN-203ENST00000376061 GCFC2P16383 781 aaKnown RBP11.89□□□□□ -0.51
PDPN-203ENST00000376061 STAT3P40763 770 aa11.89□□□□□ -0.51
PDPN-203ENST00000376061 GRIN1Q05586 938 aa11.89□□□□□ -0.51
PDPN-203ENST00000376061 PLS1Q14651 629 aa11.89□□□□□ -0.51
PDPN-203ENST00000376061 ADALQ6DHV7 355 aa11.89□□□□□ -0.51
PDPN-203ENST00000376061 RIOX2Q8IUF8 465 aa11.89□□□□□ -0.51
PDPN-203ENST00000376061 FSIP1Q8NA03 581 aa11.89□□□□□ -0.51
PDPN-203ENST00000376061 MRPS27Q92552 414 aaKnown RBP11.89□□□□□ -0.51
PDPN-203ENST00000376061 CLIC6Q96NY7 704 aa11.89□□□□□ -0.51
PDPN-203ENST00000376061 PAGR1Q9BTK6 254 aa11.89□□□□□ -0.51
PDPN-203ENST00000376061 SPATC1LQ9H0A9 340 aa11.89□□□□□ -0.51
PDPN-203ENST00000376061 TMEM60Q9H2L4 133 aa11.89□□□□□ -0.51
PDPN-203ENST00000376061 GOLPH3LQ9H4A5 285 aa11.89□□□□□ -0.51
PDPN-203ENST00000376061 ACAD9Q9H845 621 aa11.89□□□□□ -0.51
PDPN-203ENST00000376061 SRPRBQ9Y5M8 271 aaKnown RBP11.89□□□□□ -0.51
PDPN-203ENST00000376061 FRMPD4Q14CM0 1322 aa11.89□□□□□ -0.51
PDPN-203ENST00000376061 RPTORQ8N122 1335 aa11.89□□□□□ -0.51
PDPN-203ENST00000376061 SLC37A4O43826 429 aa11.88□□□□□ -0.51
PDPN-203ENST00000376061 CYP2C8P10632 490 aa11.88□□□□□ -0.51
PDPN-203ENST00000376061 FSTL1Q12841 308 aa11.88□□□□□ -0.51
PDPN-203ENST00000376061 PPP4R3AQ6IN85 833 aa11.88□□□□□ -0.51
PDPN-203ENST00000376061 SHC4Q6S5L8 630 aa11.88□□□□□ -0.51
PDPN-203ENST00000376061 CCAR1Q8IX12 1150 aaKnown RBP11.88□□□□□ -0.51
PDPN-203ENST00000376061 FAM43AQ8N2R8 423 aa11.88□□□□□ -0.51
PDPN-203ENST00000376061 SAMD3Q8N6K7 520 aa11.88□□□□□ -0.51
PDPN-203ENST00000376061 SYTL5Q8TDW5 730 aaPredicted RBP11.88□□□□□ -0.51
PDPN-203ENST00000376061 FERMT2Q96AC1 680 aa11.88□□□□□ -0.51
PDPN-203ENST00000376061 MBOAT7Q96N66 472 aa11.88□□□□□ -0.51
PDPN-203ENST00000376061 NAP1L4Q99733 375 aaKnown RBP11.88□□□□□ -0.51
PDPN-203ENST00000376061 EHMT1Q9H9B1 1298 aa11.88□□□□□ -0.51
PDPN-203ENST00000376061 TXNRD2Q9NNW7 524 aa11.88□□□□□ -0.51
PDPN-203ENST00000376061 CYP3A7-CYP3A51PA0A087WV96 503 aa11.87□□□□□ -0.51
PDPN-203ENST00000376061 TESPA1A2RU30 521 aaPredicted RBP11.87□□□□□ -0.51
PDPN-203ENST00000376061 TMEM88BA6NKF7 163 aa11.87□□□□□ -0.51
PDPN-203ENST00000376061 LAD1O00515 517 aa11.87□□□□□ -0.51
PDPN-203ENST00000376061 OR52Z1P0C646 297 aa11.87□□□□□ -0.51
PDPN-203ENST00000376061 CMA1P23946 247 aa11.87□□□□□ -0.51
PDPN-203ENST00000376061 CYP3A7P24462 503 aa11.87□□□□□ -0.51
PDPN-203ENST00000376061 YY1P25490 414 aa11.87□□□□□ -0.51
PDPN-203ENST00000376061 USP11P51784 963 aa11.87□□□□□ -0.51
PDPN-203ENST00000376061 RPS6P62753 249 aaKnown RBP11.87□□□□□ -0.51
PDPN-203ENST00000376061 IL17AQ16552 155 aa11.87□□□□□ -0.51
PDPN-203ENST00000376061 RESP18Q5W5W9 173 aa11.87□□□□□ -0.51
PDPN-203ENST00000376061 ARL6IP4Q66PJ3 421 aaKnown RBP11.87□□□□□ -0.51
PDPN-203ENST00000376061 CAVIN1Q6NZI2 390 aaKnown RBP11.87□□□□□ -0.51
PDPN-203ENST00000376061 MOXD1Q6UVY6 613 aa11.87□□□□□ -0.51
PDPN-203ENST00000376061 NSMFQ6X4W1 530 aa11.87□□□□□ -0.51
PDPN-203ENST00000376061 RNF207Q6ZRF8 634 aa11.87□□□□□ -0.51
PDPN-203ENST00000376061 ZNF784Q8NCA9 323 aaPredicted RBP11.87□□□□□ -0.51
PDPN-203ENST00000376061 CHST13Q8NET6 341 aa11.87□□□□□ -0.51
PDPN-203ENST00000376061 GTF3C2Q8WUA4 911 aaPredicted RBP11.87□□□□□ -0.51
PDPN-203ENST00000376061 PTPN18Q99952 460 aa11.87□□□□□ -0.51
PDPN-203ENST00000376061 MOV10L1Q9BXT6 1211 aaKnown RBP11.87□□□□□ -0.51
PDPN-203ENST00000376061 SCUBE2Q9NQ36 999 aa11.87□□□□□ -0.51
PDPN-203ENST00000376061 A1CFQ9NQ94 594 aaKnown RBP11.87□□□□□ -0.51
PDPN-203ENST00000376061 MAP3K20Q9NYL2 800 aaKnown RBP11.87□□□□□ -0.51
PDPN-203ENST00000376061 TMEM63CQ9P1W3 806 aa11.87□□□□□ -0.51
PDPN-203ENST00000376061 RBPJLQ9UBG7 517 aa11.87□□□□□ -0.51
PDPN-203ENST00000376061 DDX25Q9UHL0 483 aaKnown RBP11.87□□□□□ -0.51
PDPN-203ENST00000376061 ABT1Q9ULW3 272 aaKnown RBP11.87□□□□□ -0.51
PDPN-203ENST00000376061 RABGAP1Q9Y3P9 1069 aa11.87□□□□□ -0.51
PDPN-203ENST00000376061 FAM237AA0A1B0GTK4 181 aa11.86□□□□□ -0.51
PDPN-203ENST00000376061 VWA3AA6NCI4 1184 aa11.86□□□□□ -0.51
PDPN-203ENST00000376061 MANSC4A6NHS7 340 aaPredicted RBP11.86□□□□□ -0.51
PDPN-203ENST00000376061 FAM155AB1AL88 458 aaPredicted RBP11.86□□□□□ -0.51
PDPN-203ENST00000376061 NR1I2O75469 434 aa11.86□□□□□ -0.51
PDPN-203ENST00000376061 CYP3A4P08684 503 aa11.86□□□□□ -0.51
PDPN-203ENST00000376061 PFKFB1P16118 471 aa11.86□□□□□ -0.51
PDPN-203ENST00000376061 CIITAP33076 1130 aa11.86□□□□□ -0.51
PDPN-203ENST00000376061 PRPHP41219 470 aa11.86□□□□□ -0.51
PDPN-203ENST00000376061 FAM160A1Q05DH4 1040 aa11.86□□□□□ -0.51
PDPN-203ENST00000376061 BAATQ14032 418 aaPredicted RBP11.86□□□□□ -0.51
PDPN-203ENST00000376061 CCDC73Q6ZRK6 1079 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms