RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 USP17L18D6R9N7 530 aa10.07□□□□□ -0.8
UBR4-201ENST00000375218 USP17L22D6RA61 530 aa10.07□□□□□ -0.8
UBR4-201ENST00000375218 USP17L17D6RBQ6 530 aa10.07□□□□□ -0.8
UBR4-201ENST00000375218 USP17L19D6RCP7 530 aa10.07□□□□□ -0.8
UBR4-201ENST00000375218 USP17L20D6RJB6 530 aa10.07□□□□□ -0.8
UBR4-201ENST00000375218 STMND1H3BQB6 276 aa10.07□□□□□ -0.8
UBR4-201ENST00000375218 TREHO43280 583 aa10.07□□□□□ -0.8
UBR4-201ENST00000375218 BTF3P20290 206 aaKnown RBP10.07□□□□□ -0.8
UBR4-201ENST00000375218 RDXP35241 583 aaKnown RBP10.07□□□□□ -0.8
UBR4-201ENST00000375218 RWDD2BP57060 319 aa10.07□□□□□ -0.8
UBR4-201ENST00000375218 USP17L24Q0WX57 530 aa10.07□□□□□ -0.8
UBR4-201ENST00000375218 PDCD2Q16342 344 aaPredicted RBP10.07□□□□□ -0.8
UBR4-201ENST00000375218 KAZNQ674X7 775 aa10.07□□□□□ -0.8
UBR4-201ENST00000375218 NAIF1Q69YI7 327 aaPredicted RBP10.07□□□□□ -0.8
UBR4-201ENST00000375218 ARHGEF18Q6ZSZ5 1173 aa10.07□□□□□ -0.8
UBR4-201ENST00000375218 RGL4Q8IZJ4 473 aa10.07□□□□□ -0.8
UBR4-201ENST00000375218 C7orf57Q8NEG2 295 aa10.07□□□□□ -0.8
UBR4-201ENST00000375218 GOT1L1Q8NHS2 421 aaPredicted RBP10.07□□□□□ -0.8
UBR4-201ENST00000375218 OSBPL10Q9BXB5 764 aa10.07□□□□□ -0.8
UBR4-201ENST00000375218 BARX2Q9UMQ3 279 aaPredicted RBP10.07□□□□□ -0.8
UBR4-201ENST00000375218 DISP2A7MBM2 1401 aa10.06□□□□□ -0.8
UBR4-201ENST00000375218 POLD2P49005 469 aa10.06□□□□□ -0.8
UBR4-201ENST00000375218 GTF2A2P52657 109 aa10.06□□□□□ -0.8
UBR4-201ENST00000375218 MZT2AQ6P582 158 aa10.06□□□□□ -0.8
UBR4-201ENST00000375218 TBC1D1Q86TI0 1168 aaPredicted RBP10.06□□□□□ -0.8
UBR4-201ENST00000375218 WDR63Q8IWG1 891 aa10.06□□□□□ -0.8
UBR4-201ENST00000375218 DZIP1LQ8IYY4 767 aaKnown RBP10.06□□□□□ -0.8
UBR4-201ENST00000375218 USP17L3A6NCW0 530 aa10.06□□□□□ -0.8
UBR4-201ENST00000375218 USP17L4A6NCW7 530 aa10.06□□□□□ -0.8
UBR4-201ENST00000375218 SEC24BO95487 1268 aa10.06□□□□□ -0.8
UBR4-201ENST00000375218 RPSAP08865 295 aaKnown RBP10.06□□□□□ -0.8
UBR4-201ENST00000375218 FGFR4P22455 802 aa10.06□□□□□ -0.8
UBR4-201ENST00000375218 SULT6B1Q6IMI4 303 aa10.06□□□□□ -0.8
UBR4-201ENST00000375218 CAPRIN2Q6IMN6 1127 aaKnown RBP10.06□□□□□ -0.8
UBR4-201ENST00000375218 USP17L2Q6R6M4 530 aa10.06□□□□□ -0.8
UBR4-201ENST00000375218 USP17L1Q7RTZ2 530 aa10.06□□□□□ -0.8
UBR4-201ENST00000375218 DNAH12Q6ZR08 3092 aa10.06□□□□□ -0.8
UBR4-201ENST00000375218 BRWD3Q6RI45 1802 aa10.06□□□□□ -0.8
UBR4-201ENST00000375218 ASMTLO95671 621 aa10.06□□□□□ -0.8
UBR4-201ENST00000375218 PFKPQ01813 784 aa10.06□□□□□ -0.8
UBR4-201ENST00000375218 INAQ16352 499 aa10.06□□□□□ -0.8
UBR4-201ENST00000375218 KCTD10Q9H3F6 313 aa10.06□□□□□ -0.8
UBR4-201ENST00000375218 ZFATQ9P243 1243 aa10.06□□□□□ -0.8
UBR4-201ENST00000375218 EDARQ9UNE0 448 aa10.06□□□□□ -0.8
UBR4-201ENST00000375218 TTLL3Q9Y4R7 772 aa10.06□□□□□ -0.8
UBR4-201ENST00000375218 MRFAP1Q9Y605 127 aa10.06□□□□□ -0.8
UBR4-201ENST00000375218 PBLDP30039 288 aaPredicted RBP10.05□□□□□ -0.8
UBR4-201ENST00000375218 PAPOLAP51003 745 aaKnown RBP10.05□□□□□ -0.8
UBR4-201ENST00000375218 CAMK2BQ13554 666 aa10.05□□□□□ -0.8
UBR4-201ENST00000375218 PLA2G4EQ3MJ16 856 aa10.05□□□□□ -0.8
UBR4-201ENST00000375218 RNF214Q8ND24 703 aa10.05□□□□□ -0.8
UBR4-201ENST00000375218 PLEKHG4BQ96PX9 1271 aa10.05□□□□□ -0.8
UBR4-201ENST00000375218 AFDNP55196 1824 aaKnown RBP10.05□□□□□ -0.8
UBR4-201ENST00000375218 TGDSO95455 350 aa10.05□□□□□ -0.8
UBR4-201ENST00000375218 HARSP12081 509 aaKnown RBP10.05□□□□□ -0.8
UBR4-201ENST00000375218 ADCY1Q08828 1119 aa10.05□□□□□ -0.8
UBR4-201ENST00000375218 IQCB1Q15051 598 aa10.05□□□□□ -0.8
UBR4-201ENST00000375218 MZT2BQ6NZ67 158 aa10.05□□□□□ -0.8
UBR4-201ENST00000375218 ANAPC16Q96DE5 110 aa10.05□□□□□ -0.8
UBR4-201ENST00000375218 METTL5Q9NRN9 209 aaKnown RBP10.05□□□□□ -0.8
UBR4-201ENST00000375218 HOOK1Q9UJC3 728 aaKnown RBP10.05□□□□□ -0.8
UBR4-201ENST00000375218 MYO5AQ9Y4I1 1855 aaKnown RBP10.05□□□□□ -0.8
UBR4-201ENST00000375218 LAMA2P24043 3122 aaKnown RBP10.05□□□□□ -0.8
UBR4-201ENST00000375218 SPDYE16A6NNV3 312 aaPredicted RBP10.05□□□□□ -0.8
UBR4-201ENST00000375218 FAM155AB1AL88 458 aaPredicted RBP10.05□□□□□ -0.8
UBR4-201ENST00000375218 CAPN3P20807 821 aa10.05□□□□□ -0.8
UBR4-201ENST00000375218 CDR1P51861 262 aa10.05□□□□□ -0.8
UBR4-201ENST00000375218 IFRD2Q12894 506 aaPredicted RBP10.05□□□□□ -0.8
UBR4-201ENST00000375218 MTMR1Q13613 665 aa10.05□□□□□ -0.8
UBR4-201ENST00000375218 G2E3Q7L622 706 aa10.05□□□□□ -0.8
UBR4-201ENST00000375218 ZNF280CQ8ND82 737 aa10.05□□□□□ -0.8
UBR4-201ENST00000375218 FAM200AQ8TCP9 573 aa10.05□□□□□ -0.8
UBR4-201ENST00000375218 MRPL9Q9BYD2 267 aaKnown RBP10.05□□□□□ -0.8
UBR4-201ENST00000375218 ADAM33Q9BZ11 813 aa10.05□□□□□ -0.8
UBR4-201ENST00000375218 NLRC4Q9NPP4 1024 aa10.05□□□□□ -0.8
UBR4-201ENST00000375218 ZNF624Q9P2J8 865 aaPredicted RBP10.05□□□□□ -0.8
UBR4-201ENST00000375218 DNMT3AQ9Y6K1 912 aaPredicted RBP10.05□□□□□ -0.8
UBR4-201ENST00000375218 CEP350Q5VT06 3117 aa10.05□□□□□ -0.8
UBR4-201ENST00000375218 SPATA31A3Q5VYP0 1347 aa10.05□□□□□ -0.8
UBR4-201ENST00000375218 TAF1P21675 1872 aa10.05□□□□□ -0.8
UBR4-201ENST00000375218 ADCY5O95622 1261 aa10.04□□□□□ -0.8
UBR4-201ENST00000375218 GCP02774 474 aa10.04□□□□□ -0.8
UBR4-201ENST00000375218 MZF1P28698 734 aaPredicted RBP10.04□□□□□ -0.8
UBR4-201ENST00000375218 PPA1Q15181 289 aa10.04□□□□□ -0.8
UBR4-201ENST00000375218 FAM114A1Q8IWE2 563 aa10.04□□□□□ -0.8
UBR4-201ENST00000375218 IPMKQ8NFU5 416 aa10.04□□□□□ -0.8
UBR4-201ENST00000375218 TAF1LQ8IZX4 1826 aa10.04□□□□□ -0.8
UBR4-201ENST00000375218 PMM2O15305 246 aa10.04□□□□□ -0.8
UBR4-201ENST00000375218 ZBTB43O43298 467 aa10.04□□□□□ -0.8
UBR4-201ENST00000375218 C21orf2O43822 256 aa10.04□□□□□ -0.8
UBR4-201ENST00000375218 STAM2O75886 525 aa10.04□□□□□ -0.8
UBR4-201ENST00000375218 MTHFRP42898 656 aa10.04□□□□□ -0.8
UBR4-201ENST00000375218 RIPK4P57078 832 aa10.04□□□□□ -0.8
UBR4-201ENST00000375218 PIN1Q13526 163 aaPredicted RBP10.04□□□□□ -0.8
UBR4-201ENST00000375218 NKX2-3Q8TAU0 364 aa10.04□□□□□ -0.8
UBR4-201ENST00000375218 UPF1Q92900 1129 aaKnown RBP eCLIP10.04□□□□□ -0.8
UBR4-201ENST00000375218 ALKBH8Q96BT7 664 aaKnown RBP10.04□□□□□ -0.8
UBR4-201ENST00000375218 CLIP3Q96DZ5 547 aa10.04□□□□□ -0.8
UBR4-201ENST00000375218 CEP95Q96GE4 821 aa10.04□□□□□ -0.8
UBR4-201ENST00000375218 NUTM2BA6NNL0 878 aaPredicted RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms