RNA–Protein interactions for RNA: ENST00000374732.7

USP48-203, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 3,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-203ENST00000374732 TSPAN1O60635 241 aa8.78□□□□□ -1
USP48-203ENST00000374732 GFPT2O94808 682 aa8.78□□□□□ -1
USP48-203ENST00000374732 ANXA13P27216 316 aa8.78□□□□□ -1
USP48-203ENST00000374732 IKQ13123 557 aaPredicted RBP8.78□□□□□ -1
USP48-203ENST00000374732 TRIM28Q13263 835 aaKnown RBP8.78□□□□□ -1
USP48-203ENST00000374732 TNIP1Q15025 636 aa8.78□□□□□ -1
USP48-203ENST00000374732 METTL11BQ5VVY1 283 aa8.78□□□□□ -1
USP48-203ENST00000374732 FBXW10Q5XX13 1052 aa8.78□□□□□ -1
USP48-203ENST00000374732 RAPH1Q70E73 1250 aa8.78□□□□□ -1
USP48-203ENST00000374732 ZNF467Q7Z7K2 595 aaPredicted RBP8.78□□□□□ -1
USP48-203ENST00000374732 SLC15A3Q8IY34 581 aa8.78□□□□□ -1
USP48-203ENST00000374732 IPMKQ8NFU5 416 aa8.78□□□□□ -1
USP48-203ENST00000374732 COG8Q96MW5 612 aa8.78□□□□□ -1
USP48-203ENST00000374732 PLEKHF1Q96S99 279 aa8.78□□□□□ -1
USP48-203ENST00000374732 CCSER2Q9H7U1 834 aa8.78□□□□□ -1
USP48-203ENST00000374732 NOB1Q9ULX3 412 aaKnown RBP8.78□□□□□ -1
USP48-203ENST00000374732 PTPRUQ92729 1446 aa8.78□□□□□ -1
USP48-203ENST00000374732 NRAPQ86VF7 1730 aa8.78□□□□□ -1
USP48-203ENST00000374732 STMND1H3BQB6 276 aa8.78□□□□□ -1
USP48-203ENST00000374732 K7ELQ4 463 aaPredicted RBP8.78□□□□□ -1
USP48-203ENST00000374732 DIAPH2O60879 1101 aa8.78□□□□□ -1
USP48-203ENST00000374732 RASGRP1O95267 797 aa8.78□□□□□ -1
USP48-203ENST00000374732 GUCA1CO95843 209 aa8.78□□□□□ -1
USP48-203ENST00000374732 ZFXP17010 805 aaPredicted RBP8.78□□□□□ -1
USP48-203ENST00000374732 FUT4P22083 530 aa8.78□□□□□ -1
USP48-203ENST00000374732 SERPINB3P29508 390 aa8.78□□□□□ -1
USP48-203ENST00000374732 RENBPP51606 427 aa8.78□□□□□ -1
USP48-203ENST00000374732 SMTNP53814 917 aa8.78□□□□□ -1
USP48-203ENST00000374732 INHBCP55103 352 aa8.78□□□□□ -1
USP48-203ENST00000374732 MOGSQ13724 837 aa8.78□□□□□ -1
USP48-203ENST00000374732 TEX9Q8N6V9 391 aa8.78□□□□□ -1
USP48-203ENST00000374732 CUL5Q93034 780 aa8.78□□□□□ -1
USP48-203ENST00000374732 TRMT2BQ96GJ1 504 aaKnown RBP8.78□□□□□ -1
USP48-203ENST00000374732 RBM41Q96IZ5 413 aaKnown RBP8.78□□□□□ -1
USP48-203ENST00000374732 C8orf76Q96K31 380 aa8.78□□□□□ -1
USP48-203ENST00000374732 PSKH2Q96QS6 385 aa8.78□□□□□ -1
USP48-203ENST00000374732 SIRT5Q9NXA8 310 aa8.78□□□□□ -1
USP48-203ENST00000374732 RTEL1Q9NZ71 1219 aa8.78□□□□□ -1
USP48-203ENST00000374732 PARP2Q9UGN5 583 aa8.78□□□□□ -1
USP48-203ENST00000374732 MCM8Q9UJA3 840 aa8.78□□□□□ -1
USP48-203ENST00000374732 TMX2Q9Y320 296 aa8.78□□□□□ -1
USP48-203ENST00000374732 GOLGA6L10A6NI86 522 aa8.77□□□□□ -1.01
USP48-203ENST00000374732 LACTBL1A8MY62 500 aa8.77□□□□□ -1.01
USP48-203ENST00000374732 PLSCR1O15162 318 aa8.77□□□□□ -1.01
USP48-203ENST00000374732 ATP8B1O43520 1251 aa8.77□□□□□ -1.01
USP48-203ENST00000374732 IFIT2P09913 472 aaKnown RBP8.77□□□□□ -1.01
USP48-203ENST00000374732 POU3F3P20264 500 aaPredicted RBP8.77□□□□□ -1.01
USP48-203ENST00000374732 ALAS2P22557 587 aa8.77□□□□□ -1.01
USP48-203ENST00000374732 CES1P23141 567 aa8.77□□□□□ -1.01
USP48-203ENST00000374732 CHKAP35790 457 aa8.77□□□□□ -1.01
USP48-203ENST00000374732 NFIAQ12857 509 aa8.77□□□□□ -1.01
USP48-203ENST00000374732 SEMA3AQ14563 771 aa8.77□□□□□ -1.01
USP48-203ENST00000374732 RSRC2Q7L4I2 434 aaKnown RBP8.77□□□□□ -1.01
USP48-203ENST00000374732 KIAA1328Q86T90 577 aa8.77□□□□□ -1.01
USP48-203ENST00000374732 SPATA2LQ8IUW3 424 aaPredicted RBP8.77□□□□□ -1.01
USP48-203ENST00000374732 OSBPL3Q9H4L5 887 aa8.77□□□□□ -1.01
USP48-203ENST00000374732 C12orf49Q9H741 205 aa8.77□□□□□ -1.01
USP48-203ENST00000374732 PGAP2Q9UHJ9 254 aa8.77□□□□□ -1.01
USP48-203ENST00000374732 C1orf167Q5SNV9 1468 aa8.77□□□□□ -1.01
USP48-203ENST00000374732 EDC4Q6P2E9 1401 aaKnown RBP8.77□□□□□ -1.01
USP48-203ENST00000374732 LARGE1O95461 756 aa8.77□□□□□ -1.01
USP48-203ENST00000374732 POTEIP0CG38 1075 aa8.77□□□□□ -1.01
USP48-203ENST00000374732 COG2Q14746 738 aa8.77□□□□□ -1.01
USP48-203ENST00000374732 THEMIS2Q5TEJ8 643 aa8.77□□□□□ -1.01
USP48-203ENST00000374732 FCHSD1Q86WN1 690 aa8.77□□□□□ -1.01
USP48-203ENST00000374732 TBCBQ99426 244 aa8.77□□□□□ -1.01
USP48-203ENST00000374732 UTP14AQ9BVJ6 771 aaKnown RBP8.77□□□□□ -1.01
USP48-203ENST00000374732 REPIN1Q9BWE0 567 aaKnown RBP8.77□□□□□ -1.01
USP48-203ENST00000374732 STK31Q9BXU1 1019 aa8.77□□□□□ -1.01
USP48-203ENST00000374732 ATP6V0A4Q9HBG4 840 aa8.77□□□□□ -1.01
USP48-203ENST00000374732 ZIM2Q9NZV7 527 aa8.77□□□□□ -1.01
USP48-203ENST00000374732 SNCAIPQ9Y6H5 919 aa8.77□□□□□ -1.01
USP48-203ENST00000374732 MON2Q7Z3U7 1717 aa8.77□□□□□ -1.01
USP48-203ENST00000374732 SPDYE2BA6NHP3 402 aa8.76□□□□□ -1.01
USP48-203ENST00000374732 SPDYE5A6NIY4 337 aa8.76□□□□□ -1.01
USP48-203ENST00000374732 ZW10O43264 779 aa8.76□□□□□ -1.01
USP48-203ENST00000374732 MGEA5O60502 916 aa8.76□□□□□ -1.01
USP48-203ENST00000374732 SPDYE6P0CI01 402 aa8.76□□□□□ -1.01
USP48-203ENST00000374732 HAAOP46952 286 aa8.76□□□□□ -1.01
USP48-203ENST00000374732 CDK17Q00537 523 aa8.76□□□□□ -1.01
USP48-203ENST00000374732 SPDYE2Q495Y8 402 aa8.76□□□□□ -1.01
USP48-203ENST00000374732 METTL24Q5JXM2 366 aa8.76□□□□□ -1.01
USP48-203ENST00000374732 RBM20Q5T481 1227 aaKnown RBP8.76□□□□□ -1.01
USP48-203ENST00000374732 CORO6Q6QEF8 472 aa8.76□□□□□ -1.01
USP48-203ENST00000374732 ZER1Q7Z7L7 766 aa8.76□□□□□ -1.01
USP48-203ENST00000374732 TTC8Q8TAM2 541 aa8.76□□□□□ -1.01
USP48-203ENST00000374732 ARHGAP45Q92619 1136 aa8.76□□□□□ -1.01
USP48-203ENST00000374732 LRRC59Q96AG4 307 aaKnown RBP8.76□□□□□ -1.01
USP48-203ENST00000374732 NAF1Q96HR8 494 aaKnown RBP8.76□□□□□ -1.01
USP48-203ENST00000374732 FRMD6Q96NE9 622 aa8.76□□□□□ -1.01
USP48-203ENST00000374732 HERC2P3Q9BVR0 1158 aa8.76□□□□□ -1.01
USP48-203ENST00000374732 PPP1R12CQ9BZL4 782 aa8.76□□□□□ -1.01
USP48-203ENST00000374732 FANCLQ9NW38 375 aa8.76□□□□□ -1.01
USP48-203ENST00000374732 SBNO1A3KN83 1393 aa8.76□□□□□ -1.01
USP48-203ENST00000374732 AKAP12Q02952 1782 aa8.76□□□□□ -1.01
USP48-203ENST00000374732 COL14A1Q05707 1796 aaKnown RBP8.76□□□□□ -1.01
USP48-203ENST00000374732 CASQ2O14958 399 aaPredicted RBP8.76□□□□□ -1.01
USP48-203ENST00000374732 APBB3O95704 486 aa8.76□□□□□ -1.01
USP48-203ENST00000374732 CPP00450 1065 aa8.76□□□□□ -1.01
USP48-203ENST00000374732 CYP17A1P05093 508 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms