RNA–Protein interactions for RNA: ENST00000373559.8

HDAC8-203, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 632 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-203ENST00000373559 MICU3Q86XE3 530 aa18.47■□□□□ 0.55
HDAC8-203ENST00000373559 SRBD1Q8N5C6 995 aaKnown RBP18.47■□□□□ 0.55
HDAC8-203ENST00000373559 FANCBQ8NB91 859 aa18.47■□□□□ 0.55
HDAC8-203ENST00000373559 SCFD2Q8WU76 684 aa18.47■□□□□ 0.55
HDAC8-203ENST00000373559 GLT1D1Q96MS3 346 aa18.47■□□□□ 0.55
HDAC8-203ENST00000373559 WDR11Q9BZH6 1224 aa18.47■□□□□ 0.55
HDAC8-203ENST00000373559 AP5M1Q9H0R1 490 aa18.47■□□□□ 0.55
HDAC8-203ENST00000373559 STARD7Q9NQZ5 370 aa18.47■□□□□ 0.55
HDAC8-203ENST00000373559 PXMP2Q9NR77 195 aa18.47■□□□□ 0.55
HDAC8-203ENST00000373559 ATP11BQ9Y2G3 1177 aa18.47■□□□□ 0.55
HDAC8-203ENST00000373559 SCN10AQ9Y5Y9 1956 aa18.46■□□□□ 0.55
HDAC8-203ENST00000373559 NKRFO15226 690 aaKnown RBP eCLIP18.46■□□□□ 0.55
HDAC8-203ENST00000373559 RXRAP19793 462 aa18.46■□□□□ 0.55
HDAC8-203ENST00000373559 BMP8BP34820 402 aa18.46■□□□□ 0.55
HDAC8-203ENST00000373559 FSCN1Q16658 493 aaKnown RBP18.46■□□□□ 0.55
HDAC8-203ENST00000373559 SYNE3Q6ZMZ3 975 aa18.46■□□□□ 0.55
HDAC8-203ENST00000373559 TCEANC2Q96MN5 208 aa18.46■□□□□ 0.55
HDAC8-203ENST00000373559 RBM28Q9NW13 759 aaKnown RBP18.46■□□□□ 0.55
HDAC8-203ENST00000373559 RBM27Q9P2N5 1060 aaKnown RBP18.46■□□□□ 0.55
HDAC8-203ENST00000373559 SEC63Q9UGP8 760 aaKnown RBP18.46■□□□□ 0.55
HDAC8-203ENST00000373559 MYH7BA7E2Y1 1941 aa18.46■□□□□ 0.55
HDAC8-203ENST00000373559 PPP2R5BQ15173 497 aa18.45■□□□□ 0.54
HDAC8-203ENST00000373559 STXBP2Q15833 593 aa18.45■□□□□ 0.54
HDAC8-203ENST00000373559 TMEM63BQ5T3F8 832 aa18.45■□□□□ 0.54
HDAC8-203ENST00000373559 ARHGEF16Q5VV41 709 aa18.45■□□□□ 0.54
HDAC8-203ENST00000373559 ANKRD33Q7Z3H0 272 aa18.45■□□□□ 0.54
HDAC8-203ENST00000373559 FBXL16Q8N461 479 aa18.45■□□□□ 0.54
HDAC8-203ENST00000373559 JAKMIP1Q96N16 626 aaKnown RBP18.45■□□□□ 0.54
HDAC8-203ENST00000373559 PDLIM7Q9NR12 457 aa18.45■□□□□ 0.54
HDAC8-203ENST00000373559 BRPF3Q9ULD4 1205 aa18.45■□□□□ 0.54
HDAC8-203ENST00000373559 FRMPD4Q14CM0 1322 aa18.45■□□□□ 0.54
HDAC8-203ENST00000373559 MROH7Q68CQ1 1323 aa18.45■□□□□ 0.54
HDAC8-203ENST00000373559 NID2Q14112 1375 aa18.44■□□□□ 0.54
HDAC8-203ENST00000373559 GCOM1H8Y6P7 765 aaPredicted RBP18.44■□□□□ 0.54
HDAC8-203ENST00000373559 DYNC1LI2O43237 492 aaPredicted RBP18.44■□□□□ 0.54
HDAC8-203ENST00000373559 ZBTB43O43298 467 aa18.44■□□□□ 0.54
HDAC8-203ENST00000373559 ZEB2O60315 1214 aa18.44■□□□□ 0.54
HDAC8-203ENST00000373559 CABYRO75952 493 aa18.44■□□□□ 0.54
HDAC8-203ENST00000373559 POLR2MP0CAP2 368 aa18.44■□□□□ 0.54
HDAC8-203ENST00000373559 MAGEA10P43363 369 aaPredicted RBP18.44■□□□□ 0.54
HDAC8-203ENST00000373559 BEX3Q00994 111 aa18.44■□□□□ 0.54
HDAC8-203ENST00000373559 BLOC1S2Q6QNY1 142 aa18.44■□□□□ 0.54
HDAC8-203ENST00000373559 TOX2Q96NM4 488 aa18.44■□□□□ 0.54
HDAC8-203ENST00000373559 PDCD2LQ9BRP1 358 aa18.44■□□□□ 0.54
HDAC8-203ENST00000373559 AGXT2Q9BYV1 514 aa18.44■□□□□ 0.54
HDAC8-203ENST00000373559 CNTNAP5Q8WYK1 1306 aa18.44■□□□□ 0.54
HDAC8-203ENST00000373559 A0A0U1RQG5 324 aaPredicted RBP18.43■□□□□ 0.54
HDAC8-203ENST00000373559 NR3C2P08235 984 aa18.43■□□□□ 0.54
HDAC8-203ENST00000373559 EIF2AK2P19525 551 aaKnown RBP18.43■□□□□ 0.54
HDAC8-203ENST00000373559 PTGS1P23219 599 aa18.43■□□□□ 0.54
HDAC8-203ENST00000373559 PSMA5P28066 241 aa18.43■□□□□ 0.54
HDAC8-203ENST00000373559 HOXA13P31271 388 aaPredicted RBP18.43■□□□□ 0.54
HDAC8-203ENST00000373559 TLE2Q04725 743 aa18.43■□□□□ 0.54
HDAC8-203ENST00000373559 TTLL4Q14679 1199 aa18.43■□□□□ 0.54
HDAC8-203ENST00000373559 CCDC62Q6P9F0 684 aa18.43■□□□□ 0.54
HDAC8-203ENST00000373559 RAB11FIP4Q86YS3 637 aa18.43■□□□□ 0.54
HDAC8-203ENST00000373559 PIBF1Q8WXW3 757 aa18.43■□□□□ 0.54
HDAC8-203ENST00000373559 PRKAG2Q9UGJ0 569 aa18.43■□□□□ 0.54
HDAC8-203ENST00000373559 KLF18A0A0U1RQI7 1052 aa18.42■□□□□ 0.54
HDAC8-203ENST00000373559 PIK3CDO00329 1044 aa18.42■□□□□ 0.54
HDAC8-203ENST00000373559 EIF3JO75822 258 aaKnown RBP18.42■□□□□ 0.54
HDAC8-203ENST00000373559 CLTBP09497 229 aa18.42■□□□□ 0.54
HDAC8-203ENST00000373559 TXNP10599 105 aaKnown RBP18.42■□□□□ 0.54
HDAC8-203ENST00000373559 CPA1P15085 419 aa18.42■□□□□ 0.54
HDAC8-203ENST00000373559 RPS6KB1P23443 525 aa18.42■□□□□ 0.54
HDAC8-203ENST00000373559 CPT1AP50416 773 aa18.42■□□□□ 0.54
HDAC8-203ENST00000373559 CDK7P50613 346 aa18.42■□□□□ 0.54
HDAC8-203ENST00000373559 RTN1Q16799 776 aa18.42■□□□□ 0.54
HDAC8-203ENST00000373559 CMTR1Q8N1G2 835 aaKnown RBP18.42■□□□□ 0.54
HDAC8-203ENST00000373559 OR6J1Q8NGC5 347 aa18.42■□□□□ 0.54
HDAC8-203ENST00000373559 USP26Q9BXU7 913 aa18.42■□□□□ 0.54
HDAC8-203ENST00000373559 SEZ6LQ9BYH1 1024 aa18.42■□□□□ 0.54
HDAC8-203ENST00000373559 GOLGA8AA7E2F4 631 aa18.41■□□□□ 0.54
HDAC8-203ENST00000373559 GOLGA8BA8MQT2 603 aa18.41■□□□□ 0.54
HDAC8-203ENST00000373559 ARIH2O95376 493 aa18.41■□□□□ 0.54
HDAC8-203ENST00000373559 FGD1P98174 961 aa18.41■□□□□ 0.54
HDAC8-203ENST00000373559 FUT2Q10981 343 aa18.41■□□□□ 0.54
HDAC8-203ENST00000373559 PGM5Q15124 567 aa18.41■□□□□ 0.54
HDAC8-203ENST00000373559 CXCL17Q6UXB2 119 aa18.41■□□□□ 0.54
HDAC8-203ENST00000373559 SLC43A3Q8NBI5 491 aa18.41■□□□□ 0.54
HDAC8-203ENST00000373559 POLR3EQ9NVU0 708 aa18.41■□□□□ 0.54
HDAC8-203ENST00000373559 DOCK5Q9H7D0 1870 aa18.4■□□□□ 0.54
HDAC8-203ENST00000373559 A6NJR5 290 aa18.4■□□□□ 0.54
HDAC8-203ENST00000373559 DCDC2CA8MYV0 355 aa18.4■□□□□ 0.54
HDAC8-203ENST00000373559 ARVCFO00192 962 aa18.4■□□□□ 0.54
HDAC8-203ENST00000373559 KIAA0355O15063 1070 aa18.4■□□□□ 0.54
HDAC8-203ENST00000373559 PQBP1O60828 265 aaKnown RBP18.4■□□□□ 0.54
HDAC8-203ENST00000373559 CASTP20810 708 aaKnown RBP18.4■□□□□ 0.54
HDAC8-203ENST00000373559 BRDTQ58F21 947 aaPredicted RBP18.4■□□□□ 0.54
HDAC8-203ENST00000373559 Q6ZUG5 572 aa18.4■□□□□ 0.54
HDAC8-203ENST00000373559 VSIG10LQ86VR7 867 aa18.4■□□□□ 0.54
HDAC8-203ENST00000373559 TEX2Q8IWB9 1127 aa18.4■□□□□ 0.54
HDAC8-203ENST00000373559 IL31RAQ8NI17 732 aa18.4■□□□□ 0.54
HDAC8-203ENST00000373559 BRF1Q92994 677 aa18.4■□□□□ 0.54
HDAC8-203ENST00000373559 LBHD1Q9BQE6 289 aaPredicted RBP18.4■□□□□ 0.54
HDAC8-203ENST00000373559 PRDM5Q9NQX1 630 aaPredicted RBP18.4■□□□□ 0.54
HDAC8-203ENST00000373559 hCG_1984214I3L0E3 225 aa18.39■□□□□ 0.53
HDAC8-203ENST00000373559 MEIS2O14770 477 aa18.39■□□□□ 0.53
HDAC8-203ENST00000373559 CCND2P30279 289 aa18.39■□□□□ 0.53
HDAC8-203ENST00000373559 FXR1P51114 621 aaKnown RBP eCLIP18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms