RNA–Protein interactions for RNA: ENST00000373386.6

GARNL3-201, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 3,143 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-201ENST00000373386 CORO1BQ9BR76 489 aa9.1□□□□□ -0.95
GARNL3-201ENST00000373386 BRIP1Q9BX63 1249 aa9.1□□□□□ -0.95
GARNL3-201ENST00000373386 MYH6P13533 1939 aa9.1□□□□□ -0.95
GARNL3-201ENST00000373386 ERICH2A1L162 156 aa9.1□□□□□ -0.95
GARNL3-201ENST00000373386 IFIT3O14879 490 aaKnown RBP9.1□□□□□ -0.95
GARNL3-201ENST00000373386 URI1O94763 535 aaPredicted RBP9.1□□□□□ -0.95
GARNL3-201ENST00000373386 MBD4O95243 580 aa9.1□□□□□ -0.95
GARNL3-201ENST00000373386 FGFR1OPO95684 399 aaKnown RBP9.1□□□□□ -0.95
GARNL3-201ENST00000373386 CALM1P0DP23 149 aa9.1□□□□□ -0.95
GARNL3-201ENST00000373386 CALM2P0DP24 149 aa9.1□□□□□ -0.95
GARNL3-201ENST00000373386 CALM3P0DP25 149 aa9.1□□□□□ -0.95
GARNL3-201ENST00000373386 SCNN1BP51168 640 aa9.1□□□□□ -0.95
GARNL3-201ENST00000373386 NAA25Q14CX7 972 aa9.1□□□□□ -0.95
GARNL3-201ENST00000373386 SUSD4Q5VX71 490 aa9.1□□□□□ -0.95
GARNL3-201ENST00000373386 NEK10Q6ZWH5 1172 aa9.1□□□□□ -0.95
GARNL3-201ENST00000373386 POTEDQ86YR6 584 aa9.1□□□□□ -0.95
GARNL3-201ENST00000373386 PLPP6Q8IY26 295 aa9.1□□□□□ -0.95
GARNL3-201ENST00000373386 CRACR2BQ8N4Y2 399 aaPredicted RBP9.1□□□□□ -0.95
GARNL3-201ENST00000373386 KAT2BQ92831 832 aa9.1□□□□□ -0.95
GARNL3-201ENST00000373386 RBM41Q96IZ5 413 aaKnown RBP9.1□□□□□ -0.95
GARNL3-201ENST00000373386 PARD6BQ9BYG5 372 aa9.1□□□□□ -0.95
GARNL3-201ENST00000373386 KCNH3Q9ULD8 1083 aa9.1□□□□□ -0.95
GARNL3-201ENST00000373386 SRPRBQ9Y5M8 271 aaKnown RBP9.1□□□□□ -0.95
GARNL3-201ENST00000373386 KIAA0754O94854 1291 aa9.09□□□□□ -0.95
GARNL3-201ENST00000373386 MARCKSP29966 332 aaPredicted RBP9.09□□□□□ -0.95
GARNL3-201ENST00000373386 GCLCP48506 637 aaPredicted RBP9.09□□□□□ -0.95
GARNL3-201ENST00000373386 CLK1P49759 484 aaKnown RBP9.09□□□□□ -0.95
GARNL3-201ENST00000373386 CLCN2P51788 898 aa9.09□□□□□ -0.95
GARNL3-201ENST00000373386 NEK2P51955 445 aa9.09□□□□□ -0.95
GARNL3-201ENST00000373386 GNL2Q13823 731 aaKnown RBP9.09□□□□□ -0.95
GARNL3-201ENST00000373386 UBE4AQ14139 1066 aa9.09□□□□□ -0.95
GARNL3-201ENST00000373386 WTAPQ15007 396 aa9.09□□□□□ -0.95
GARNL3-201ENST00000373386 RTN1Q16799 776 aa9.09□□□□□ -0.95
GARNL3-201ENST00000373386 SYNE4Q8N205 404 aa9.09□□□□□ -0.95
GARNL3-201ENST00000373386 CHCHD4Q8N4Q1 142 aa9.09□□□□□ -0.95
GARNL3-201ENST00000373386 SPIRE2Q8WWL2 714 aa9.09□□□□□ -0.95
GARNL3-201ENST00000373386 ZKSCAN4Q969J2 545 aaPredicted RBP9.09□□□□□ -0.95
GARNL3-201ENST00000373386 SYTL4Q96C24 671 aaPredicted RBP9.09□□□□□ -0.95
GARNL3-201ENST00000373386 SCYL1Q96KG9 808 aa9.09□□□□□ -0.95
GARNL3-201ENST00000373386 ALS2CR12Q96Q35 445 aa9.09□□□□□ -0.95
GARNL3-201ENST00000373386 CCDC68Q9H2F9 335 aa9.09□□□□□ -0.95
GARNL3-201ENST00000373386 TAOK3Q9H2K8 898 aa9.09□□□□□ -0.95
GARNL3-201ENST00000373386 TUBA8Q9NY65 449 aaPredicted RBP9.09□□□□□ -0.95
GARNL3-201ENST00000373386 FBXO2Q9UK22 296 aaPredicted RBP9.09□□□□□ -0.95
GARNL3-201ENST00000373386 ZNF652Q9Y2D9 606 aa9.09□□□□□ -0.95
GARNL3-201ENST00000373386 FAN1Q9Y2M0 1017 aa9.09□□□□□ -0.95
GARNL3-201ENST00000373386 PARP3Q9Y6F1 533 aa9.09□□□□□ -0.95
GARNL3-201ENST00000373386 ZFXP17010 805 aaPredicted RBP9.09□□□□□ -0.95
GARNL3-201ENST00000373386 ERCC5P28715 1186 aaPredicted RBP9.09□□□□□ -0.95
GARNL3-201ENST00000373386 OAS2P29728 719 aaKnown RBP9.09□□□□□ -0.95
GARNL3-201ENST00000373386 SF3B3Q15393 1217 aaKnown RBP9.09□□□□□ -0.95
GARNL3-201ENST00000373386 SEC23AQ15436 765 aa9.09□□□□□ -0.95
GARNL3-201ENST00000373386 SMUG1Q53HV7 270 aa9.09□□□□□ -0.95
GARNL3-201ENST00000373386 MIGA1Q8NAN2 632 aa9.09□□□□□ -0.95
GARNL3-201ENST00000373386 DPF2Q92785 391 aa9.09□□□□□ -0.95
GARNL3-201ENST00000373386 PYM1Q9BRP8 204 aaKnown RBP9.09□□□□□ -0.95
GARNL3-201ENST00000373386 DESP17661 470 aa9.09□□□□□ -0.95
GARNL3-201ENST00000373386 RPL17P18621 184 aaKnown RBP9.09□□□□□ -0.95
GARNL3-201ENST00000373386 USP11P51784 963 aa9.09□□□□□ -0.95
GARNL3-201ENST00000373386 ROR2Q01974 943 aaKnown RBP9.09□□□□□ -0.95
GARNL3-201ENST00000373386 MKRN3Q13064 507 aaKnown RBP9.09□□□□□ -0.95
GARNL3-201ENST00000373386 ISM2Q6H9L7 571 aa9.09□□□□□ -0.95
GARNL3-201ENST00000373386 BARGINQ6ZT62 677 aa9.09□□□□□ -0.95
GARNL3-201ENST00000373386 METTL16Q86W50 562 aaKnown RBP9.09□□□□□ -0.95
GARNL3-201ENST00000373386 MICU3Q86XE3 530 aa9.09□□□□□ -0.95
GARNL3-201ENST00000373386 SAMD14Q8IZD0 417 aaPredicted RBP9.09□□□□□ -0.95
GARNL3-201ENST00000373386 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.09□□□□□ -0.95
GARNL3-201ENST00000373386 CDK5RAP3Q96JB5 506 aa9.09□□□□□ -0.95
GARNL3-201ENST00000373386 IWS1Q96ST2 819 aa9.09□□□□□ -0.95
GARNL3-201ENST00000373386 MUC3BQ9H195 1237 aa9.09□□□□□ -0.95
GARNL3-201ENST00000373386 PPP2R2CQ9Y2T4 447 aa9.09□□□□□ -0.95
GARNL3-201ENST00000373386 SPO11Q9Y5K1 396 aa9.09□□□□□ -0.95
GARNL3-201ENST00000373386 MYH13Q9UKX3 1938 aa9.08□□□□□ -0.96
GARNL3-201ENST00000373386 PRPF3O43395 683 aaKnown RBP9.08□□□□□ -0.96
GARNL3-201ENST00000373386 HIP1RO75146 1068 aa9.08□□□□□ -0.96
GARNL3-201ENST00000373386 DDAH1O94760 285 aa9.08□□□□□ -0.96
GARNL3-201ENST00000373386 ZNF131P52739 623 aa9.08□□□□□ -0.96
GARNL3-201ENST00000373386 CSE1LP55060 971 aaKnown RBP9.08□□□□□ -0.96
GARNL3-201ENST00000373386 PPARAQ07869 468 aa9.08□□□□□ -0.96
GARNL3-201ENST00000373386 PNOCQ13519 176 aa9.08□□□□□ -0.96
GARNL3-201ENST00000373386 SLC7A5P1Q8MH63 180 aa9.08□□□□□ -0.96
GARNL3-201ENST00000373386 GPR161Q8N6U8 529 aaKnown RBP9.08□□□□□ -0.96
GARNL3-201ENST00000373386 ESR2Q92731 530 aa9.08□□□□□ -0.96
GARNL3-201ENST00000373386 GSDMAQ96QA5 445 aa9.08□□□□□ -0.96
GARNL3-201ENST00000373386 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.08□□□□□ -0.96
GARNL3-201ENST00000373386 CARD6Q9BX69 1037 aa9.08□□□□□ -0.96
GARNL3-201ENST00000373386 UBXN6Q9BZV1 441 aa9.08□□□□□ -0.96
GARNL3-201ENST00000373386 AATFQ9NY61 560 aaKnown RBP eCLIP9.08□□□□□ -0.96
GARNL3-201ENST00000373386 MYH14Q7Z406 1995 aaKnown RBP9.08□□□□□ -0.96
GARNL3-201ENST00000373386 SPATA31A1Q5TZJ5 1347 aa9.08□□□□□ -0.96
GARNL3-201ENST00000373386 VWA3AA6NCI4 1184 aa9.08□□□□□ -0.96
GARNL3-201ENST00000373386 STX10O60499 249 aa9.08□□□□□ -0.96
GARNL3-201ENST00000373386 ZNF18P17022 549 aa9.08□□□□□ -0.96
GARNL3-201ENST00000373386 TOB1P50616 345 aaPredicted RBP9.08□□□□□ -0.96
GARNL3-201ENST00000373386 PSMD7P51665 324 aa9.08□□□□□ -0.96
GARNL3-201ENST00000373386 TBX2Q13207 712 aaPredicted RBP9.08□□□□□ -0.96
GARNL3-201ENST00000373386 CUL4BQ13620 913 aa9.08□□□□□ -0.96
GARNL3-201ENST00000373386 MORC3Q14149 939 aa9.08□□□□□ -0.96
GARNL3-201ENST00000373386 SLC10A5Q5PT55 438 aa9.08□□□□□ -0.96
GARNL3-201ENST00000373386 TMEM139Q8IV31 216 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms