RNA–Protein interactions for RNA: ENST00000372994.1

C9orf16-201, Transcript of chromosome 9 open reading frame 16, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf16, Length 713 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf16-201ENST00000372994 HSD17B4P51659 736 aa17.44■□□□□ 0.38
C9orf16-201ENST00000372994 FAM126BQ8IXS8 530 aa17.44■□□□□ 0.38
C9orf16-201ENST00000372994 TMTC2Q8N394 836 aa17.44■□□□□ 0.38
C9orf16-201ENST00000372994 RMDN3Q96TC7 470 aa17.44■□□□□ 0.38
C9orf16-201ENST00000372994 TBX21Q9UL17 535 aa17.44■□□□□ 0.38
C9orf16-201ENST00000372994 GRIN2DO15399 1336 aa17.44■□□□□ 0.38
C9orf16-201ENST00000372994 COL6A3P12111 3177 aa17.43■□□□□ 0.38
C9orf16-201ENST00000372994 PNMA6FA0A0J9YX94 578 aa17.43■□□□□ 0.38
C9orf16-201ENST00000372994 CFBP00751 764 aa17.43■□□□□ 0.38
C9orf16-201ENST00000372994 CD4P01730 458 aa17.43■□□□□ 0.38
C9orf16-201ENST00000372994 RAG1P15918 1043 aa17.43■□□□□ 0.38
C9orf16-201ENST00000372994 COL9A3Q14050 684 aaPredicted RBP17.43■□□□□ 0.38
C9orf16-201ENST00000372994 PPP2R5BQ15173 497 aa17.43■□□□□ 0.38
C9orf16-201ENST00000372994 SHHQ15465 462 aa17.43■□□□□ 0.38
C9orf16-201ENST00000372994 CASC1Q6TDU7 716 aa17.43■□□□□ 0.38
C9orf16-201ENST00000372994 CCDC136Q96JN2 1154 aa17.43■□□□□ 0.38
C9orf16-201ENST00000372994 TMEM87BQ96K49 555 aa17.43■□□□□ 0.38
C9orf16-201ENST00000372994 PIGSQ96S52 555 aa17.43■□□□□ 0.38
C9orf16-201ENST00000372994 GPHNQ9NQX3 736 aaPredicted RBP17.43■□□□□ 0.38
C9orf16-201ENST00000372994 DDAH1O94760 285 aa17.42■□□□□ 0.38
C9orf16-201ENST00000372994 TIMP1P01033 207 aa17.42■□□□□ 0.38
C9orf16-201ENST00000372994 TXNP10599 105 aaKnown RBP17.42■□□□□ 0.38
C9orf16-201ENST00000372994 SMARCA1P28370 1054 aa17.42■□□□□ 0.38
C9orf16-201ENST00000372994 LIFRP42702 1097 aa17.42■□□□□ 0.38
C9orf16-201ENST00000372994 CPT1AP50416 773 aa17.42■□□□□ 0.38
C9orf16-201ENST00000372994 ITGA7Q13683 1181 aa17.42■□□□□ 0.38
C9orf16-201ENST00000372994 STXBP2Q15833 593 aa17.42■□□□□ 0.38
C9orf16-201ENST00000372994 CCDC62Q6P9F0 684 aa17.42■□□□□ 0.38
C9orf16-201ENST00000372994 HOMER1Q86YM7 354 aa17.42■□□□□ 0.38
C9orf16-201ENST00000372994 ZNF654Q8IZM8 581 aa17.42■□□□□ 0.38
C9orf16-201ENST00000372994 KIAA1217Q5T5P2 1943 aa17.41■□□□□ 0.38
C9orf16-201ENST00000372994 SH2B2O14492 632 aaPredicted RBP17.41■□□□□ 0.38
C9orf16-201ENST00000372994 TLR3O15455 904 aaKnown RBP17.41■□□□□ 0.38
C9orf16-201ENST00000372994 CDC45O75419 566 aa17.41■□□□□ 0.38
C9orf16-201ENST00000372994 KIF5BP33176 963 aa17.41■□□□□ 0.38
C9orf16-201ENST00000372994 TTLL4Q14679 1199 aa17.41■□□□□ 0.38
C9orf16-201ENST00000372994 C9orf50Q5SZB4 431 aa17.41■□□□□ 0.38
C9orf16-201ENST00000372994 RNF20Q5VTR2 975 aa17.41■□□□□ 0.38
C9orf16-201ENST00000372994 ARHGEF16Q5VV41 709 aa17.41■□□□□ 0.38
C9orf16-201ENST00000372994 OR6J1Q8NGC5 347 aa17.41■□□□□ 0.38
C9orf16-201ENST00000372994 PXMP2Q9NR77 195 aa17.41■□□□□ 0.38
C9orf16-201ENST00000372994 POLR3EQ9NVU0 708 aa17.41■□□□□ 0.38
C9orf16-201ENST00000372994 A6NJR5 290 aa17.4■□□□□ 0.38
C9orf16-201ENST00000372994 EIF3JO75822 258 aaKnown RBP17.4■□□□□ 0.38
C9orf16-201ENST00000372994 ARIH2O95376 493 aa17.4■□□□□ 0.38
C9orf16-201ENST00000372994 NR3C2P08235 984 aa17.4■□□□□ 0.38
C9orf16-201ENST00000372994 EPHB4P54760 987 aa17.4■□□□□ 0.38
C9orf16-201ENST00000372994 PURAQ00577 322 aaKnown RBP17.4■□□□□ 0.38
C9orf16-201ENST00000372994 FPGSQ05932 587 aa17.4■□□□□ 0.38
C9orf16-201ENST00000372994 TSGA10IPQ3SY00 556 aa17.4■□□□□ 0.38
C9orf16-201ENST00000372994 BRDTQ58F21 947 aaPredicted RBP17.4■□□□□ 0.38
C9orf16-201ENST00000372994 CTCFLQ8NI51 663 aaPredicted RBP17.4■□□□□ 0.38
C9orf16-201ENST00000372994 COPS5Q92905 334 aa17.4■□□□□ 0.38
C9orf16-201ENST00000372994 SPZ1Q9BXG8 430 aa17.4■□□□□ 0.38
C9orf16-201ENST00000372994 CCDC69A6NI79 296 aa17.39■□□□□ 0.37
C9orf16-201ENST00000372994 KPNA6O60684 536 aa17.39■□□□□ 0.37
C9orf16-201ENST00000372994 CALM1P0DP23 149 aa17.39■□□□□ 0.37
C9orf16-201ENST00000372994 CALM2P0DP24 149 aa17.39■□□□□ 0.37
C9orf16-201ENST00000372994 CALM3P0DP25 149 aa17.39■□□□□ 0.37
C9orf16-201ENST00000372994 EIF2AK2P19525 551 aaKnown RBP17.39■□□□□ 0.37
C9orf16-201ENST00000372994 PSMC6P62333 389 aa17.39■□□□□ 0.37
C9orf16-201ENST00000372994 MFSD5Q6N075 450 aa17.39■□□□□ 0.37
C9orf16-201ENST00000372994 NFXL1Q6ZNB6 911 aa17.39■□□□□ 0.37
C9orf16-201ENST00000372994 SEPT14Q6ZU15 432 aa17.39■□□□□ 0.37
C9orf16-201ENST00000372994 LZTS2Q9BRK4 669 aa17.39■□□□□ 0.37
C9orf16-201ENST00000372994 MYL10Q9BUA6 226 aa17.39■□□□□ 0.37
C9orf16-201ENST00000372994 SCN10AQ9Y5Y9 1956 aa17.39■□□□□ 0.37
C9orf16-201ENST00000372994 GCOM1H8Y6P7 765 aaPredicted RBP17.38■□□□□ 0.37
C9orf16-201ENST00000372994 POLR2MP0CAP2 368 aa17.38■□□□□ 0.37
C9orf16-201ENST00000372994 HOXA13P31271 388 aaPredicted RBP17.38■□□□□ 0.37
C9orf16-201ENST00000372994 GNAQP50148 359 aa17.38■□□□□ 0.37
C9orf16-201ENST00000372994 LY6KQ17RY6 165 aa17.38■□□□□ 0.37
C9orf16-201ENST00000372994 PDCD2LQ9BRP1 358 aa17.38■□□□□ 0.37
C9orf16-201ENST00000372994 MTG1Q9BT17 334 aaPredicted RBP17.38■□□□□ 0.37
C9orf16-201ENST00000372994 B4GALT4O60513 344 aa17.37■□□□□ 0.37
C9orf16-201ENST00000372994 MYL3P08590 195 aa17.37■□□□□ 0.37
C9orf16-201ENST00000372994 EXOSC10Q01780 885 aaKnown RBP17.37■□□□□ 0.37
C9orf16-201ENST00000372994 VSIG10LQ86VR7 867 aa17.37■□□□□ 0.37
C9orf16-201ENST00000372994 SGMS1Q86VZ5 419 aa17.37■□□□□ 0.37
C9orf16-201ENST00000372994 SRBD1Q8N5C6 995 aaKnown RBP17.37■□□□□ 0.37
C9orf16-201ENST00000372994 DEFB123Q8N688 67 aa17.37■□□□□ 0.37
C9orf16-201ENST00000372994 RRP36Q96EU6 259 aaKnown RBP17.37■□□□□ 0.37
C9orf16-201ENST00000372994 NEK1Q96PY6 1258 aa17.37■□□□□ 0.37
C9orf16-201ENST00000372994 TRPV6Q9H1D0 765 aa17.37■□□□□ 0.37
C9orf16-201ENST00000372994 ALDH8A1Q9H2A2 487 aaPredicted RBP17.37■□□□□ 0.37
C9orf16-201ENST00000372994 DDX41Q9UJV9 622 aaKnown RBP17.37■□□□□ 0.37
C9orf16-201ENST00000372994 SLC12A7Q9Y666 1083 aa17.37■□□□□ 0.37
C9orf16-201ENST00000372994 RGS20O76081 388 aa17.36■□□□□ 0.37
C9orf16-201ENST00000372994 GH1P01241 217 aa17.36■□□□□ 0.37
C9orf16-201ENST00000372994 ARHGAP1Q07960 439 aa17.36■□□□□ 0.37
C9orf16-201ENST00000372994 PGM5Q15124 567 aa17.36■□□□□ 0.37
C9orf16-201ENST00000372994 FAM109BQ6ICB4 259 aaPredicted RBP17.36■□□□□ 0.37
C9orf16-201ENST00000372994 RASEFQ8IZ41 740 aa17.36■□□□□ 0.37
C9orf16-201ENST00000372994 TMEM199Q8N511 208 aa17.36■□□□□ 0.37
C9orf16-201ENST00000372994 FANCBQ8NB91 859 aa17.36■□□□□ 0.37
C9orf16-201ENST00000372994 EMID1Q96A84 441 aaPredicted RBP17.36■□□□□ 0.37
C9orf16-201ENST00000372994 LRRC2Q9BYS8 371 aa17.36■□□□□ 0.37
C9orf16-201ENST00000372994 MYH7BA7E2Y1 1941 aa17.35■□□□□ 0.37
C9orf16-201ENST00000372994 PLEKHA8P1O95397 391 aa17.35■□□□□ 0.37
C9orf16-201ENST00000372994 SUPT20HL2P0C7V6 817 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms