RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.29□□□□□ -1.72
MCF2-202ENST00000370573 AKTIPQ9H8T0 292 aa4.29□□□□□ -1.72
MCF2-202ENST00000370573 BBOX1O75936 387 aa4.29□□□□□ -1.72
MCF2-202ENST00000370573 NPR1P16066 1061 aa4.29□□□□□ -1.72
MCF2-202ENST00000370573 ATP5JP18859 108 aa4.29□□□□□ -1.72
MCF2-202ENST00000370573 KCNA3P22001 575 aa4.29□□□□□ -1.72
MCF2-202ENST00000370573 CD68P34810 354 aaPredicted RBP4.29□□□□□ -1.72
MCF2-202ENST00000370573 PUM3Q15397 648 aaKnown RBP4.29□□□□□ -1.72
MCF2-202ENST00000370573 FOXD4L6Q3SYB3 417 aaPredicted RBP4.29□□□□□ -1.72
MCF2-202ENST00000370573 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.29□□□□□ -1.72
MCF2-202ENST00000370573 PEAR1Q5VY43 1037 aaPredicted RBP4.29□□□□□ -1.72
MCF2-202ENST00000370573 OLFM4Q6UX06 510 aa4.29□□□□□ -1.72
MCF2-202ENST00000370573 FOXD4L3Q6VB84 417 aaPredicted RBP4.29□□□□□ -1.72
MCF2-202ENST00000370573 LPIN2Q92539 896 aa4.29□□□□□ -1.72
MCF2-202ENST00000370573 EDC3Q96F86 508 aaKnown RBP4.29□□□□□ -1.72
MCF2-202ENST00000370573 MASTLQ96GX5 879 aa4.29□□□□□ -1.72
MCF2-202ENST00000370573 MTFR1LQ9H019 292 aa4.29□□□□□ -1.72
MCF2-202ENST00000370573 BOLA2Q9H3K6 86 aa4.29□□□□□ -1.72
MCF2-202ENST00000370573 COL11A2P13942 1736 aaPredicted RBP4.29□□□□□ -1.72
MCF2-202ENST00000370573 C10orf71Q711Q0 1435 aa4.28□□□□□ -1.72
MCF2-202ENST00000370573 IRS2Q9Y4H2 1338 aa4.28□□□□□ -1.72
MCF2-202ENST00000370573 H0YIN7 160 aa4.28□□□□□ -1.72
MCF2-202ENST00000370573 GLRX3O76003 335 aaKnown RBP4.28□□□□□ -1.72
MCF2-202ENST00000370573 STK10O94804 968 aaKnown RBP4.28□□□□□ -1.72
MCF2-202ENST00000370573 GLB1P16278 677 aa4.28□□□□□ -1.72
MCF2-202ENST00000370573 KLRK1P26718 216 aa4.28□□□□□ -1.72
MCF2-202ENST00000370573 PHKA1P46020 1223 aa4.28□□□□□ -1.72
MCF2-202ENST00000370573 NLRP12P59046 1061 aa4.28□□□□□ -1.72
MCF2-202ENST00000370573 GPSM2P81274 684 aa4.28□□□□□ -1.72
MCF2-202ENST00000370573 UBE4AQ14139 1066 aa4.28□□□□□ -1.72
MCF2-202ENST00000370573 PRSS36Q5K4E3 855 aa4.28□□□□□ -1.72
MCF2-202ENST00000370573 HS2ST1Q7LGA3 356 aa4.28□□□□□ -1.72
MCF2-202ENST00000370573 PMEPA1Q969W9 287 aa4.28□□□□□ -1.72
MCF2-202ENST00000370573 MRPL18Q9H0U6 180 aaKnown RBP4.28□□□□□ -1.72
MCF2-202ENST00000370573 MUC3BQ9H195 1237 aa4.28□□□□□ -1.72
MCF2-202ENST00000370573 A0A1B0GUL6 1792 aa4.28□□□□□ -1.72
MCF2-202ENST00000370573 A0A0G2JLW4 131 aa4.28□□□□□ -1.72
MCF2-202ENST00000370573 F8W735 103 aaPredicted RBP4.28□□□□□ -1.72
MCF2-202ENST00000370573 ERC2O15083 957 aa4.28□□□□□ -1.72
MCF2-202ENST00000370573 SLC5A1P13866 664 aa4.28□□□□□ -1.72
MCF2-202ENST00000370573 DPEP1P16444 411 aa4.28□□□□□ -1.72
MCF2-202ENST00000370573 ALDH1B1P30837 517 aa4.28□□□□□ -1.72
MCF2-202ENST00000370573 GYG1P46976 350 aa4.28□□□□□ -1.72
MCF2-202ENST00000370573 SERINC3Q13530 473 aa4.28□□□□□ -1.72
MCF2-202ENST00000370573 STYK1Q6J9G0 422 aa4.28□□□□□ -1.72
MCF2-202ENST00000370573 FAM117BQ6P1L5 589 aa4.28□□□□□ -1.72
MCF2-202ENST00000370573 ACAD11Q709F0 780 aa4.28□□□□□ -1.72
MCF2-202ENST00000370573 SP8Q8IXZ3 490 aa4.28□□□□□ -1.72
MCF2-202ENST00000370573 FBF1Q8TES7 1133 aa4.28□□□□□ -1.72
MCF2-202ENST00000370573 ZNF622Q969S3 477 aaKnown RBP eCLIP4.28□□□□□ -1.72
MCF2-202ENST00000370573 RILPL2Q969X0 211 aa4.28□□□□□ -1.72
MCF2-202ENST00000370573 NXPE3Q969Y0 559 aa4.28□□□□□ -1.72
MCF2-202ENST00000370573 HAUS7Q99871 368 aa4.28□□□□□ -1.72
MCF2-202ENST00000370573 SSBP4Q9BWG4 385 aaPredicted RBP4.28□□□□□ -1.72
MCF2-202ENST00000370573 ANKRD2Q9GZV1 360 aa4.28□□□□□ -1.72
MCF2-202ENST00000370573 ZFYVE28Q9HCC9 887 aa4.28□□□□□ -1.72
MCF2-202ENST00000370573 ATP6V0A2Q9Y487 856 aa4.28□□□□□ -1.72
MCF2-202ENST00000370573 SLX4Q8IY92 1834 aa4.28□□□□□ -1.72
MCF2-202ENST00000370573 ZNF804BA4D1E1 1349 aa4.27□□□□□ -1.73
MCF2-202ENST00000370573 hCG_2014768A0A024R1R8 64 aa4.27□□□□□ -1.73
MCF2-202ENST00000370573 ADAM11O75078 769 aa4.27□□□□□ -1.73
MCF2-202ENST00000370573 CHGBP05060 677 aa4.27□□□□□ -1.73
MCF2-202ENST00000370573 IFIT1P09914 478 aaKnown RBP4.27□□□□□ -1.73
MCF2-202ENST00000370573 EDN3P14138 238 aa4.27□□□□□ -1.73
MCF2-202ENST00000370573 CHMLP26374 656 aa4.27□□□□□ -1.73
MCF2-202ENST00000370573 POLD1P28340 1107 aa4.27□□□□□ -1.73
MCF2-202ENST00000370573 CCDC158Q5M9N0 1113 aa4.27□□□□□ -1.73
MCF2-202ENST00000370573 GORABQ5T7V8 394 aa4.27□□□□□ -1.73
MCF2-202ENST00000370573 EPS8L3Q8TE67 593 aaKnown RBP4.27□□□□□ -1.73
MCF2-202ENST00000370573 UBASH3BQ8TF42 649 aa4.27□□□□□ -1.73
MCF2-202ENST00000370573 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.27□□□□□ -1.73
MCF2-202ENST00000370573 ZNF512BQ96KM6 892 aaPredicted RBP4.27□□□□□ -1.73
MCF2-202ENST00000370573 FAM84BQ96KN1 310 aaPredicted RBP4.27□□□□□ -1.73
MCF2-202ENST00000370573 GPR101Q96P66 508 aaPredicted RBP4.27□□□□□ -1.73
MCF2-202ENST00000370573 ANTXR1Q9H6X2 564 aa4.27□□□□□ -1.73
MCF2-202ENST00000370573 POLLQ9UGP5 575 aa4.27□□□□□ -1.73
MCF2-202ENST00000370573 AKAP11Q9UKA4 1901 aa4.27□□□□□ -1.73
MCF2-202ENST00000370573 TM4SF5O14894 197 aa4.27□□□□□ -1.73
MCF2-202ENST00000370573 CDC45O75419 566 aa4.27□□□□□ -1.73
MCF2-202ENST00000370573 PARNO95453 639 aaKnown RBP4.27□□□□□ -1.73
MCF2-202ENST00000370573 EIF4BP23588 611 aaKnown RBP4.27□□□□□ -1.73
MCF2-202ENST00000370573 MCAMP43121 646 aa4.27□□□□□ -1.73
MCF2-202ENST00000370573 IGBP1P78318 339 aa4.27□□□□□ -1.73
MCF2-202ENST00000370573 DUOXA2Q1HG44 320 aa4.27□□□□□ -1.73
MCF2-202ENST00000370573 TTC39AQ5SRH9 613 aa4.27□□□□□ -1.73
MCF2-202ENST00000370573 PRPF40BQ6NWY9 871 aaKnown RBP4.27□□□□□ -1.73
MCF2-202ENST00000370573 MAP4K3Q8IVH8 894 aa4.27□□□□□ -1.73
MCF2-202ENST00000370573 CACTIN-AS1Q8N1I8 211 aa4.27□□□□□ -1.73
MCF2-202ENST00000370573 TBC1D16Q8TBP0 767 aa4.27□□□□□ -1.73
MCF2-202ENST00000370573 EVI5LQ96CN4 794 aa4.27□□□□□ -1.73
MCF2-202ENST00000370573 ADAM19Q9H013 955 aa4.27□□□□□ -1.73
MCF2-202ENST00000370573 IL25Q9H293 177 aa4.27□□□□□ -1.73
MCF2-202ENST00000370573 HMG20BQ9P0W2 317 aa4.27□□□□□ -1.73
MCF2-202ENST00000370573 LEMD3Q9Y2U8 911 aa4.27□□□□□ -1.73
MCF2-202ENST00000370573 SUGT1Q9Y2Z0 365 aa4.27□□□□□ -1.73
MCF2-202ENST00000370573 ARAP2Q8WZ64 1704 aa4.27□□□□□ -1.73
MCF2-202ENST00000370573 XDHP47989 1333 aa4.26□□□□□ -1.73
MCF2-202ENST00000370573 KIAA1551Q9HCM1 1747 aa4.26□□□□□ -1.73
MCF2-202ENST00000370573 H3BRJ5 948 aa4.26□□□□□ -1.73
MCF2-202ENST00000370573 GOLIM4O00461 696 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms