RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 ZNF713Q8N859 430 aaPredicted RBP10.12□□□□□ -0.79
SNX27-201ENST00000368838 CTCFLQ8NI51 663 aaPredicted RBP10.12□□□□□ -0.79
SNX27-201ENST00000368838 NUP88Q99567 741 aaPredicted RBP10.12□□□□□ -0.79
SNX27-201ENST00000368838 SCAND2PQ9GZW5 306 aaPredicted RBP10.12□□□□□ -0.79
SNX27-201ENST00000368838 KANSL2Q9H9L4 492 aa10.12□□□□□ -0.79
SNX27-201ENST00000368838 NCOA5Q9HCD5 579 aaKnown RBP10.12□□□□□ -0.79
SNX27-201ENST00000368838 ARHGEF10LQ9HCE6 1279 aa10.12□□□□□ -0.79
SNX27-201ENST00000368838 SH3GLB2Q9NR46 395 aa10.12□□□□□ -0.79
SNX27-201ENST00000368838 HOXC10Q9NYD6 342 aa10.12□□□□□ -0.79
SNX27-201ENST00000368838 TMX2Q9Y320 296 aa10.12□□□□□ -0.79
SNX27-201ENST00000368838 BOLA1Q9Y3E2 137 aa10.12□□□□□ -0.79
SNX27-201ENST00000368838 LAMA2P24043 3122 aaKnown RBP10.11□□□□□ -0.79
SNX27-201ENST00000368838 A0A1W2PPC1 479 aa10.11□□□□□ -0.79
SNX27-201ENST00000368838 PRDM1O75626 825 aa10.11□□□□□ -0.79
SNX27-201ENST00000368838 TTLL1O95922 423 aa10.11□□□□□ -0.79
SNX27-201ENST00000368838 PGK2P07205 417 aa10.11□□□□□ -0.79
SNX27-201ENST00000368838 HOXC6P09630 235 aa10.11□□□□□ -0.79
SNX27-201ENST00000368838 CYBAP13498 195 aa10.11□□□□□ -0.79
SNX27-201ENST00000368838 SSRP1Q08945 709 aaKnown RBP10.11□□□□□ -0.79
SNX27-201ENST00000368838 RESTQ13127 1097 aa10.11□□□□□ -0.79
SNX27-201ENST00000368838 HIC1Q14526 733 aa10.11□□□□□ -0.79
SNX27-201ENST00000368838 TMEM132BQ14DG7 1078 aa10.11□□□□□ -0.79
SNX27-201ENST00000368838 KLHL40Q2TBA0 621 aa10.11□□□□□ -0.79
SNX27-201ENST00000368838 FAM83BQ5T0W9 1011 aa10.11□□□□□ -0.79
SNX27-201ENST00000368838 GALNT17Q6IS24 598 aa10.11□□□□□ -0.79
SNX27-201ENST00000368838 MICU3Q86XE3 530 aa10.11□□□□□ -0.79
SNX27-201ENST00000368838 PNMA1Q8ND90 353 aa10.11□□□□□ -0.79
SNX27-201ENST00000368838 OXER1Q8TDS5 423 aa10.11□□□□□ -0.79
SNX27-201ENST00000368838 FERMT2Q96AC1 680 aa10.11□□□□□ -0.79
SNX27-201ENST00000368838 TMEM47Q9BQJ4 181 aa10.11□□□□□ -0.79
SNX27-201ENST00000368838 SPZ1Q9BXG8 430 aa10.11□□□□□ -0.79
SNX27-201ENST00000368838 VCPKMTQ9H867 229 aa10.11□□□□□ -0.79
SNX27-201ENST00000368838 KAT14Q9H8E8 782 aa10.11□□□□□ -0.79
SNX27-201ENST00000368838 CFAP45Q9UL16 551 aa10.11□□□□□ -0.79
SNX27-201ENST00000368838 ISY1Q9ULR0 285 aaKnown RBP10.11□□□□□ -0.79
SNX27-201ENST00000368838 ATP11BQ9Y2G3 1177 aa10.11□□□□□ -0.79
SNX27-201ENST00000368838 MYO9BQ13459 2157 aa10.11□□□□□ -0.79
SNX27-201ENST00000368838 MBD3O95983 291 aa10.1□□□□□ -0.79
SNX27-201ENST00000368838 XBP1P17861 261 aa10.1□□□□□ -0.79
SNX27-201ENST00000368838 BMP8BP34820 402 aa10.1□□□□□ -0.79
SNX27-201ENST00000368838 RTP1P59025 263 aa10.1□□□□□ -0.79
SNX27-201ENST00000368838 ASPRV1Q53RT3 343 aa10.1□□□□□ -0.79
SNX27-201ENST00000368838 TDHQ8IZJ6 230 aa10.1□□□□□ -0.79
SNX27-201ENST00000368838 DEFB123Q8N688 67 aa10.1□□□□□ -0.79
SNX27-201ENST00000368838 LPAR1Q92633 364 aa10.1□□□□□ -0.79
SNX27-201ENST00000368838 LENG1Q96BZ8 264 aaPredicted RBP10.1□□□□□ -0.79
SNX27-201ENST00000368838 C8orf76Q96K31 380 aa10.1□□□□□ -0.79
SNX27-201ENST00000368838 FOXP1Q9H334 677 aaPredicted RBP10.1□□□□□ -0.79
SNX27-201ENST00000368838 LMBRD1Q9NUN5 540 aa10.1□□□□□ -0.79
SNX27-201ENST00000368838 GBF1Q92538 1859 aa10.1□□□□□ -0.79
SNX27-201ENST00000368838 LCTP09848 1927 aa10.1□□□□□ -0.79
SNX27-201ENST00000368838 MYH6P13533 1939 aa10.1□□□□□ -0.79
SNX27-201ENST00000368838 H3BQV1 296 aa10.09□□□□□ -0.79
SNX27-201ENST00000368838 WDR46O15213 610 aaKnown RBP10.09□□□□□ -0.79
SNX27-201ENST00000368838 PLA2G6O60733 806 aa10.09□□□□□ -0.79
SNX27-201ENST00000368838 KRT85P78386 507 aa10.09□□□□□ -0.79
SNX27-201ENST00000368838 PKN1Q16512 942 aa10.09□□□□□ -0.79
SNX27-201ENST00000368838 FAM47AQ5JRC9 791 aa10.09□□□□□ -0.79
SNX27-201ENST00000368838 GPATCH4Q5T3I0 446 aaKnown RBP10.09□□□□□ -0.79
SNX27-201ENST00000368838 GMCL1P1Q8NEA9 526 aa10.09□□□□□ -0.79
SNX27-201ENST00000368838 SHCBP1Q8NEM2 672 aa10.09□□□□□ -0.79
SNX27-201ENST00000368838 CEP95Q96GE4 821 aa10.09□□□□□ -0.79
SNX27-201ENST00000368838 MAML3Q96JK9 1138 aa10.09□□□□□ -0.79
SNX27-201ENST00000368838 MMP19Q99542 508 aa10.09□□□□□ -0.79
SNX27-201ENST00000368838 ZKSCAN3Q9BRR0 538 aa10.09□□□□□ -0.79
SNX27-201ENST00000368838 RIOX1Q9H6W3 641 aa10.09□□□□□ -0.79
SNX27-201ENST00000368838 SH2D4AQ9H788 454 aa10.09□□□□□ -0.79
SNX27-201ENST00000368838 PRDM5Q9NQX1 630 aaPredicted RBP10.09□□□□□ -0.79
SNX27-201ENST00000368838 RCOR1Q9UKL0 485 aa10.09□□□□□ -0.79
SNX27-201ENST00000368838 ESYT2A0FGR8 921 aa10.08□□□□□ -0.8
SNX27-201ENST00000368838 DNM1LO00429 736 aa10.08□□□□□ -0.8
SNX27-201ENST00000368838 STRNO43815 780 aa10.08□□□□□ -0.8
SNX27-201ENST00000368838 IGHA2P01877 340 aa10.08□□□□□ -0.8
SNX27-201ENST00000368838 FCER1AP12319 257 aa10.08□□□□□ -0.8
SNX27-201ENST00000368838 TAL1P17542 331 aaPredicted RBP10.08□□□□□ -0.8
SNX27-201ENST00000368838 ADCYAP1R1P41586 468 aa10.08□□□□□ -0.8
SNX27-201ENST00000368838 PTGDRQ13258 359 aa10.08□□□□□ -0.8
SNX27-201ENST00000368838 PFKFB3Q16875 520 aaPredicted RBP10.08□□□□□ -0.8
SNX27-201ENST00000368838 OLFML2BQ68BL8 750 aa10.08□□□□□ -0.8
SNX27-201ENST00000368838 SLC17A8Q8NDX2 589 aa10.08□□□□□ -0.8
SNX27-201ENST00000368838 MTMR8Q96EF0 704 aa10.08□□□□□ -0.8
SNX27-201ENST00000368838 GMCL1Q96IK5 515 aa10.08□□□□□ -0.8
SNX27-201ENST00000368838 FAM161BQ96MY7 647 aa10.08□□□□□ -0.8
SNX27-201ENST00000368838 ZNF396Q96N95 335 aaPredicted RBP10.08□□□□□ -0.8
SNX27-201ENST00000368838 LBHD1Q9BQE6 289 aaPredicted RBP10.08□□□□□ -0.8
SNX27-201ENST00000368838 ALG1Q9BT22 464 aa10.08□□□□□ -0.8
SNX27-201ENST00000368838 MROH8Q9H579 483 aa10.08□□□□□ -0.8
SNX27-201ENST00000368838 GOPCQ9HD26 462 aa10.08□□□□□ -0.8
SNX27-201ENST00000368838 POLR3EQ9NVU0 708 aa10.08□□□□□ -0.8
SNX27-201ENST00000368838 MAD2L2Q9UI95 211 aa10.08□□□□□ -0.8
SNX27-201ENST00000368838 CNTNAP5Q8WYK1 1306 aa10.08□□□□□ -0.8
SNX27-201ENST00000368838 VPS37CA5D8V6 355 aaPredicted RBP10.07□□□□□ -0.8
SNX27-201ENST00000368838 KBTBD13C9JR72 458 aa10.07□□□□□ -0.8
SNX27-201ENST00000368838 VWA5AO00534 786 aa10.07□□□□□ -0.8
SNX27-201ENST00000368838 SEPT4O43236 478 aa10.07□□□□□ -0.8
SNX27-201ENST00000368838 TRAK2O60296 914 aa10.07□□□□□ -0.8
SNX27-201ENST00000368838 NMT2O60551 498 aa10.07□□□□□ -0.8
SNX27-201ENST00000368838 MSCO60682 206 aa10.07□□□□□ -0.8
SNX27-201ENST00000368838 GABBR2O75899 941 aa10.07□□□□□ -0.8
SNX27-201ENST00000368838 YEATS4O95619 227 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms