RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 RAB11FIP4Q86YS3 637 aa21.96■■□□□ 1.11
CKS1B-203ENST00000368439 SAMD3Q8N6K7 520 aa21.96■■□□□ 1.11
CKS1B-203ENST00000368439 IWS1Q96ST2 819 aa21.96■■□□□ 1.11
CKS1B-203ENST00000368439 LZTS2Q9BRK4 669 aa21.96■■□□□ 1.11
CKS1B-203ENST00000368439 PDLIM7Q9NR12 457 aa21.96■■□□□ 1.11
CKS1B-203ENST00000368439 PXMP2Q9NR77 195 aa21.96■■□□□ 1.11
CKS1B-203ENST00000368439 SNX14Q9Y5W7 946 aa21.96■■□□□ 1.11
CKS1B-203ENST00000368439 SLC12A7Q9Y666 1083 aa21.96■■□□□ 1.11
CKS1B-203ENST00000368439 LAMA3Q16787 3333 aa21.96■■□□□ 1.11
CKS1B-203ENST00000368439 A0A1W2PPC1 479 aa21.95■■□□□ 1.1
CKS1B-203ENST00000368439 B4DLN1 442 aa21.95■■□□□ 1.1
CKS1B-203ENST00000368439 SLC34A2O95436 690 aa21.95■■□□□ 1.1
CKS1B-203ENST00000368439 GNAQP50148 359 aa21.95■■□□□ 1.1
CKS1B-203ENST00000368439 CDK7P50613 346 aa21.95■■□□□ 1.1
CKS1B-203ENST00000368439 MRPL12P52815 198 aaKnown RBP21.95■■□□□ 1.1
CKS1B-203ENST00000368439 TRAF1Q13077 416 aa21.95■■□□□ 1.1
CKS1B-203ENST00000368439 ANKRD33Q7Z3H0 272 aa21.95■■□□□ 1.1
CKS1B-203ENST00000368439 SH3RF1Q7Z6J0 888 aa21.95■■□□□ 1.1
CKS1B-203ENST00000368439 CMTR1Q8N1G2 835 aaKnown RBP21.95■■□□□ 1.1
CKS1B-203ENST00000368439 FANCBQ8NB91 859 aa21.95■■□□□ 1.1
CKS1B-203ENST00000368439 PIBF1Q8WXW3 757 aa21.95■■□□□ 1.1
CKS1B-203ENST00000368439 GLT1D1Q96MS3 346 aa21.95■■□□□ 1.1
CKS1B-203ENST00000368439 AP5M1Q9H0R1 490 aa21.95■■□□□ 1.1
CKS1B-203ENST00000368439 BRPF3Q9ULD4 1205 aa21.95■■□□□ 1.1
CKS1B-203ENST00000368439 TRIM43BA6NCK2 446 aa21.94■■□□□ 1.1
CKS1B-203ENST00000368439 ARIH2O95376 493 aa21.94■■□□□ 1.1
CKS1B-203ENST00000368439 EIF2AK2P19525 551 aaKnown RBP21.94■■□□□ 1.1
CKS1B-203ENST00000368439 HOXA13P31271 388 aaPredicted RBP21.94■■□□□ 1.1
CKS1B-203ENST00000368439 CCDC62Q6P9F0 684 aa21.94■■□□□ 1.1
CKS1B-203ENST00000368439 APOA5Q6Q788 366 aa21.94■■□□□ 1.1
CKS1B-203ENST00000368439 SCFD2Q8WU76 684 aa21.94■■□□□ 1.1
CKS1B-203ENST00000368439 TRIM43Q96BQ3 446 aaPredicted RBP21.94■■□□□ 1.1
CKS1B-203ENST00000368439 TOX2Q96NM4 488 aa21.94■■□□□ 1.1
CKS1B-203ENST00000368439 REC8O95072 547 aa21.93■■□□□ 1.1
CKS1B-203ENST00000368439 HMGB1P09429 215 aaKnown RBP21.93■■□□□ 1.1
CKS1B-203ENST00000368439 CPA1P15085 419 aa21.93■■□□□ 1.1
CKS1B-203ENST00000368439 MDM2Q00987 491 aaPredicted RBP21.93■■□□□ 1.1
CKS1B-203ENST00000368439 ARHGEF16Q5VV41 709 aa21.93■■□□□ 1.1
CKS1B-203ENST00000368439 CXCL17Q6UXB2 119 aa21.93■■□□□ 1.1
CKS1B-203ENST00000368439 TMTC3Q6ZXV5 915 aa21.93■■□□□ 1.1
CKS1B-203ENST00000368439 MICU3Q86XE3 530 aa21.93■■□□□ 1.1
CKS1B-203ENST00000368439 COPS5Q92905 334 aa21.93■■□□□ 1.1
CKS1B-203ENST00000368439 RRP36Q96EU6 259 aaKnown RBP21.93■■□□□ 1.1
CKS1B-203ENST00000368439 PDCD2LQ9BRP1 358 aa21.93■■□□□ 1.1
CKS1B-203ENST00000368439 GRIN2DO15399 1336 aa21.92■■□□□ 1.1
CKS1B-203ENST00000368439 A0A0U1RQG5 324 aaPredicted RBP21.92■■□□□ 1.1
CKS1B-203ENST00000368439 GCOM1H8Y6P7 765 aaPredicted RBP21.92■■□□□ 1.1
CKS1B-203ENST00000368439 NKRFO15226 690 aaKnown RBP eCLIP21.92■■□□□ 1.1
CKS1B-203ENST00000368439 EPB41L2O43491 1005 aaKnown RBP21.92■■□□□ 1.1
CKS1B-203ENST00000368439 PQBP1O60828 265 aaKnown RBP21.92■■□□□ 1.1
CKS1B-203ENST00000368439 NR3C2P08235 984 aa21.92■■□□□ 1.1
CKS1B-203ENST00000368439 POLR2MP0CAP2 368 aa21.92■■□□□ 1.1
CKS1B-203ENST00000368439 FAAP100Q0VG06 881 aa21.92■■□□□ 1.1
CKS1B-203ENST00000368439 PPP2R5BQ15173 497 aa21.92■■□□□ 1.1
CKS1B-203ENST00000368439 STXBP2Q15833 593 aa21.92■■□□□ 1.1
CKS1B-203ENST00000368439 SLC43A3Q8NBI5 491 aa21.92■■□□□ 1.1
CKS1B-203ENST00000368439 SZT2Q5T011 3432 aa21.92■■□□□ 1.1
CKS1B-203ENST00000368439 ARVCFO00192 962 aa21.91■■□□□ 1.1
CKS1B-203ENST00000368439 CABYRO75952 493 aa21.91■■□□□ 1.1
CKS1B-203ENST00000368439 RGS20O76081 388 aa21.91■■□□□ 1.1
CKS1B-203ENST00000368439 CLTBP09497 229 aa21.91■■□□□ 1.1
CKS1B-203ENST00000368439 TXNP10599 105 aaKnown RBP21.91■■□□□ 1.1
CKS1B-203ENST00000368439 ITGB8P26012 769 aa21.91■■□□□ 1.1
CKS1B-203ENST00000368439 JAKMIP1Q96N16 626 aaKnown RBP21.91■■□□□ 1.1
CKS1B-203ENST00000368439 PRDM5Q9NQX1 630 aaPredicted RBP21.91■■□□□ 1.1
CKS1B-203ENST00000368439 PRKAG2Q9UGJ0 569 aa21.91■■□□□ 1.1
CKS1B-203ENST00000368439 SCN10AQ9Y5Y9 1956 aa21.9■■□□□ 1.1
CKS1B-203ENST00000368439 MYH7BA7E2Y1 1941 aa21.9■■□□□ 1.1
CKS1B-203ENST00000368439 FRMPD4Q14CM0 1322 aa21.9■■□□□ 1.1
CKS1B-203ENST00000368439 KIAA0355O15063 1070 aa21.9■■□□□ 1.1
CKS1B-203ENST00000368439 ZEB2O60315 1214 aa21.9■■□□□ 1.1
CKS1B-203ENST00000368439 EIF3JO75822 258 aaKnown RBP21.9■■□□□ 1.1
CKS1B-203ENST00000368439 FUT2Q10981 343 aa21.9■■□□□ 1.1
CKS1B-203ENST00000368439 TTLL4Q14679 1199 aa21.9■■□□□ 1.1
CKS1B-203ENST00000368439 PGM5Q15124 567 aa21.9■■□□□ 1.1
CKS1B-203ENST00000368439 OR6J1Q8NGC5 347 aa21.9■■□□□ 1.1
CKS1B-203ENST00000368439 IL31RAQ8NI17 732 aa21.9■■□□□ 1.1
CKS1B-203ENST00000368439 UBE2OQ9C0C9 1292 aaKnown RBP21.9■■□□□ 1.1
CKS1B-203ENST00000368439 FAM217BQ9NTX9 383 aaPredicted RBP21.9■■□□□ 1.1
CKS1B-203ENST00000368439 CNTNAP5Q8WYK1 1306 aa21.89■■□□□ 1.1
CKS1B-203ENST00000368439 A6NJR5 290 aa21.89■■□□□ 1.09
CKS1B-203ENST00000368439 SYNE3Q6ZMZ3 975 aa21.89■■□□□ 1.09
CKS1B-203ENST00000368439 SEPT14Q6ZU15 432 aa21.89■■□□□ 1.09
CKS1B-203ENST00000368439 VSIG10LQ86VR7 867 aa21.89■■□□□ 1.09
CKS1B-203ENST00000368439 FAM126BQ8IXS8 530 aa21.89■■□□□ 1.09
CKS1B-203ENST00000368439 FBXL16Q8N461 479 aa21.89■■□□□ 1.09
CKS1B-203ENST00000368439 CCDC82Q8N4S0 544 aa21.89■■□□□ 1.09
CKS1B-203ENST00000368439 USP26Q9BXU7 913 aa21.89■■□□□ 1.09
CKS1B-203ENST00000368439 SEC63Q9UGP8 760 aaKnown RBP21.89■■□□□ 1.09
CKS1B-203ENST00000368439 MROH7Q68CQ1 1323 aa21.88■■□□□ 1.09
CKS1B-203ENST00000368439 KLF18A0A0U1RQI7 1052 aa21.88■■□□□ 1.09
CKS1B-203ENST00000368439 hCG_1642624A0A1W2PR95 340 aa21.88■■□□□ 1.09
CKS1B-203ENST00000368439 DCDC2CA8MYV0 355 aa21.88■■□□□ 1.09
CKS1B-203ENST00000368439 PIK3CDO00329 1044 aa21.88■■□□□ 1.09
CKS1B-203ENST00000368439 MEIS2O14770 477 aa21.88■■□□□ 1.09
CKS1B-203ENST00000368439 ZBTB43O43298 467 aa21.88■■□□□ 1.09
CKS1B-203ENST00000368439 CPT1AP50416 773 aa21.88■■□□□ 1.09
CKS1B-203ENST00000368439 RCAN1P53805 252 aa21.88■■□□□ 1.09
CKS1B-203ENST00000368439 PURAQ00577 322 aaKnown RBP21.88■■□□□ 1.09
CKS1B-203ENST00000368439 LY6KQ17RY6 165 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms