RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 MUM1L1Q5H9M0 696 aa10.2□□□□□ -0.78
HMGB1P39-201ENST00000366304 IQSEC1Q6DN90 963 aa10.2□□□□□ -0.78
HMGB1P39-201ENST00000366304 AACSQ86V21 672 aa10.2□□□□□ -0.78
HMGB1P39-201ENST00000366304 STK11IPQ8N1F8 1099 aa10.2□□□□□ -0.78
HMGB1P39-201ENST00000366304 DHX38Q92620 1227 aaKnown RBP10.2□□□□□ -0.78
HMGB1P39-201ENST00000366304 SEZ6LQ9BYH1 1024 aa10.2□□□□□ -0.78
HMGB1P39-201ENST00000366304 NYAP2Q9P242 653 aa10.2□□□□□ -0.78
HMGB1P39-201ENST00000366304 Q9Y3F1 56 aa10.2□□□□□ -0.78
HMGB1P39-201ENST00000366304 TECTAO75443 2155 aa10.19□□□□□ -0.78
HMGB1P39-201ENST00000366304 LCTP09848 1927 aa10.19□□□□□ -0.78
HMGB1P39-201ENST00000366304 TANC1Q9C0D5 1861 aa10.19□□□□□ -0.78
HMGB1P39-201ENST00000366304 ZEB2O60315 1214 aa10.19□□□□□ -0.78
HMGB1P39-201ENST00000366304 NBNO60934 754 aa10.19□□□□□ -0.78
HMGB1P39-201ENST00000366304 BAIAP3O94812 1187 aa10.19□□□□□ -0.78
HMGB1P39-201ENST00000366304 MYL3P08590 195 aa10.19□□□□□ -0.78
HMGB1P39-201ENST00000366304 SUPT20HL2P0C7V6 817 aa10.19□□□□□ -0.78
HMGB1P39-201ENST00000366304 COL19A1Q14993 1142 aa10.19□□□□□ -0.78
HMGB1P39-201ENST00000366304 DUSP28Q4G0W2 176 aa10.19□□□□□ -0.78
HMGB1P39-201ENST00000366304 FAM117BQ6P1L5 589 aa10.19□□□□□ -0.78
HMGB1P39-201ENST00000366304 RASGRP2Q7LDG7 609 aa10.19□□□□□ -0.78
HMGB1P39-201ENST00000366304 SPNS2Q8IVW8 549 aa10.19□□□□□ -0.78
HMGB1P39-201ENST00000366304 MORC4Q8TE76 937 aa10.19□□□□□ -0.78
HMGB1P39-201ENST00000366304 CHMP4CQ96CF2 233 aa10.19□□□□□ -0.78
HMGB1P39-201ENST00000366304 TGS1Q96RS0 853 aaKnown RBP10.19□□□□□ -0.78
HMGB1P39-201ENST00000366304 ATP8A2Q9NTI2 1148 aa10.19□□□□□ -0.78
HMGB1P39-201ENST00000366304 RNF146Q9NTX7 359 aa10.19□□□□□ -0.78
HMGB1P39-201ENST00000366304 FAM86C1Q9NVL1 165 aa10.19□□□□□ -0.78
HMGB1P39-201ENST00000366304 WDR70Q9NW82 654 aa10.19□□□□□ -0.78
HMGB1P39-201ENST00000366304 CLIP2Q9UDT6 1046 aa10.19□□□□□ -0.78
HMGB1P39-201ENST00000366304 FBXO40Q9UH90 709 aa10.19□□□□□ -0.78
HMGB1P39-201ENST00000366304 MUTYHQ9UIF7 546 aa10.19□□□□□ -0.78
HMGB1P39-201ENST00000366304 CACNA1HO95180 2353 aa10.18□□□□□ -0.78
HMGB1P39-201ENST00000366304 MYH8P13535 1937 aa10.18□□□□□ -0.78
HMGB1P39-201ENST00000366304 ASB14A6NK59 587 aa10.18□□□□□ -0.78
HMGB1P39-201ENST00000366304 DPYSL4O14531 572 aa10.18□□□□□ -0.78
HMGB1P39-201ENST00000366304 GJB5O95377 273 aa10.18□□□□□ -0.78
HMGB1P39-201ENST00000366304 CT47B1P0C2W7 299 aaPredicted RBP10.18□□□□□ -0.78
HMGB1P39-201ENST00000366304 ADD2P35612 726 aa10.18□□□□□ -0.78
HMGB1P39-201ENST00000366304 LTBRP36941 435 aa10.18□□□□□ -0.78
HMGB1P39-201ENST00000366304 OAZ1P54368 228 aa10.18□□□□□ -0.78
HMGB1P39-201ENST00000366304 FAM47CQ5HY64 1035 aa10.18□□□□□ -0.78
HMGB1P39-201ENST00000366304 KIAA1211Q6ZU35 1233 aa10.18□□□□□ -0.78
HMGB1P39-201ENST00000366304 LRRC47Q8N1G4 583 aaKnown RBP10.18□□□□□ -0.78
HMGB1P39-201ENST00000366304 COPS5Q92905 334 aa10.18□□□□□ -0.78
HMGB1P39-201ENST00000366304 DNAJC2Q99543 621 aaKnown RBP10.18□□□□□ -0.78
HMGB1P39-201ENST00000366304 ACAD9Q9H845 621 aa10.18□□□□□ -0.78
HMGB1P39-201ENST00000366304 IL1RAPL2Q9NP60 686 aa10.18□□□□□ -0.78
HMGB1P39-201ENST00000366304 CYP39A1Q9NYL5 469 aa10.18□□□□□ -0.78
HMGB1P39-201ENST00000366304 EXOC6BQ9Y2D4 811 aa10.18□□□□□ -0.78
HMGB1P39-201ENST00000366304 MYO15AQ9UKN7 3530 aa10.18□□□□□ -0.78
HMGB1P39-201ENST00000366304 ANP32CO43423 234 aa10.17□□□□□ -0.78
HMGB1P39-201ENST00000366304 KCNJ6P48051 423 aa10.17□□□□□ -0.78
HMGB1P39-201ENST00000366304 PLCB2Q00722 1185 aa10.17□□□□□ -0.78
HMGB1P39-201ENST00000366304 DLX2Q07687 328 aaPredicted RBP10.17□□□□□ -0.78
HMGB1P39-201ENST00000366304 MBTPS1Q14703 1052 aa10.17□□□□□ -0.78
HMGB1P39-201ENST00000366304 TTF1Q15361 905 aaPredicted RBP10.17□□□□□ -0.78
HMGB1P39-201ENST00000366304 TCEAL5Q5H9L2 206 aa10.17□□□□□ -0.78
HMGB1P39-201ENST00000366304 PPP4R3BQ5MIZ7 849 aa10.17□□□□□ -0.78
HMGB1P39-201ENST00000366304 TRAF7Q6Q0C0 670 aa10.17□□□□□ -0.78
HMGB1P39-201ENST00000366304 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.17□□□□□ -0.78
HMGB1P39-201ENST00000366304 ADHFE1Q8IWW8 467 aa10.17□□□□□ -0.78
HMGB1P39-201ENST00000366304 RETREG2Q8NC44 543 aa10.17□□□□□ -0.78
HMGB1P39-201ENST00000366304 CEP95Q96GE4 821 aa10.17□□□□□ -0.78
HMGB1P39-201ENST00000366304 TRERF1Q96PN7 1200 aa10.17□□□□□ -0.78
HMGB1P39-201ENST00000366304 RAD9AQ99638 391 aa10.17□□□□□ -0.78
HMGB1P39-201ENST00000366304 MTG1Q9BT17 334 aaPredicted RBP10.17□□□□□ -0.78
HMGB1P39-201ENST00000366304 ZBED2Q9BTP6 218 aa10.17□□□□□ -0.78
HMGB1P39-201ENST00000366304 POLR3EQ9NVU0 708 aa10.17□□□□□ -0.78
HMGB1P39-201ENST00000366304 FEM1BQ9UK73 627 aa10.17□□□□□ -0.78
HMGB1P39-201ENST00000366304 COG6Q9Y2V7 657 aa10.17□□□□□ -0.78
HMGB1P39-201ENST00000366304 WDR87Q6ZQQ6 2873 aa10.17□□□□□ -0.78
HMGB1P39-201ENST00000366304 SCN10AQ9Y5Y9 1956 aa10.17□□□□□ -0.78
HMGB1P39-201ENST00000366304 RBM47A0AV96 593 aaKnown RBP10.16□□□□□ -0.78
HMGB1P39-201ENST00000366304 TMEM232C9JQI7 657 aa10.16□□□□□ -0.78
HMGB1P39-201ENST00000366304 CXCL10P02778 98 aa10.16□□□□□ -0.78
HMGB1P39-201ENST00000366304 HERC4Q5GLZ8 1057 aaPredicted RBP10.16□□□□□ -0.78
HMGB1P39-201ENST00000366304 GDF6Q6KF10 455 aaPredicted RBP10.16□□□□□ -0.78
HMGB1P39-201ENST00000366304 NFRKBQ6P4R8 1299 aa10.16□□□□□ -0.78
HMGB1P39-201ENST00000366304 ZNF454Q8N9F8 522 aa10.16□□□□□ -0.78
HMGB1P39-201ENST00000366304 FRAT1Q92837 279 aaPredicted RBP10.16□□□□□ -0.78
HMGB1P39-201ENST00000366304 WNT8BQ93098 351 aa10.16□□□□□ -0.78
HMGB1P39-201ENST00000366304 MKL1Q969V6 931 aa10.16□□□□□ -0.78
HMGB1P39-201ENST00000366304 MRPL38Q96DV4 380 aaKnown RBP10.16□□□□□ -0.78
HMGB1P39-201ENST00000366304 MFSD14AQ96MC6 490 aa10.16□□□□□ -0.78
HMGB1P39-201ENST00000366304 WDR11Q9BZH6 1224 aa10.16□□□□□ -0.78
HMGB1P39-201ENST00000366304 PUS7LQ9H0K6 701 aaKnown RBP10.16□□□□□ -0.78
HMGB1P39-201ENST00000366304 VTA1Q9NP79 307 aa10.16□□□□□ -0.78
HMGB1P39-201ENST00000366304 CTDP1Q9Y5B0 961 aaPredicted RBP10.16□□□□□ -0.78
HMGB1P39-201ENST00000366304 SLC4A4Q9Y6R1 1079 aa10.16□□□□□ -0.78
HMGB1P39-201ENST00000366304 DCHS1Q96JQ0 3298 aa10.16□□□□□ -0.78
HMGB1P39-201ENST00000366304 DMDP11532 3685 aa10.15□□□□□ -0.78
HMGB1P39-201ENST00000366304 SIP14410 1827 aa10.15□□□□□ -0.78
HMGB1P39-201ENST00000366304 GFRA3O60609 400 aa10.15□□□□□ -0.78
HMGB1P39-201ENST00000366304 PRDM1O75626 825 aa10.15□□□□□ -0.78
HMGB1P39-201ENST00000366304 ALAS1P13196 640 aa10.15□□□□□ -0.78
HMGB1P39-201ENST00000366304 CLUL1Q15846 466 aa10.15□□□□□ -0.78
HMGB1P39-201ENST00000366304 E2F4Q16254 413 aa10.15□□□□□ -0.78
HMGB1P39-201ENST00000366304 PUS10Q3MIT2 529 aaKnown RBP10.15□□□□□ -0.78
HMGB1P39-201ENST00000366304 SLFN13Q68D06 897 aa10.15□□□□□ -0.78
HMGB1P39-201ENST00000366304 CNKSR3Q6P9H4 555 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms