RNA–Protein interactions for RNA: ENST00000364953.1

SNORD48-201, Transcript of small nucleolar RNA, C/D box 48, humanhuman

BASIC

Gene SNORD48, Length 64 nt, Biotype snoRNA, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD48-201ENST00000364953 TRIM29Q14134 588 aa1.96□□□□□ -2.1
SNORD48-201ENST00000364953 TRIM14Q14142 442 aa1.96□□□□□ -2.1
SNORD48-201ENST00000364953 CASP8Q14790 479 aa1.96□□□□□ -2.1
SNORD48-201ENST00000364953 SART3Q15020 963 aaKnown RBP1.96□□□□□ -2.1
SNORD48-201ENST00000364953 TCEAL1Q15170 157 aa1.96□□□□□ -2.1
SNORD48-201ENST00000364953 SAFBQ15424 915 aaKnown RBP eCLIP1.96□□□□□ -2.1
SNORD48-201ENST00000364953 TRADDQ15628 312 aa1.96□□□□□ -2.1
SNORD48-201ENST00000364953 SLC15A2Q16348 729 aa1.96□□□□□ -2.1
SNORD48-201ENST00000364953 NFIL3Q16649 462 aa1.96□□□□□ -2.1
SNORD48-201ENST00000364953 CCDC142Q17RM4 750 aa1.96□□□□□ -2.1
SNORD48-201ENST00000364953 FAM98CQ17RN3 349 aaKnown RBP1.96□□□□□ -2.1
SNORD48-201ENST00000364953 KIF4BQ2VIQ3 1234 aa1.96□□□□□ -2.1
SNORD48-201ENST00000364953 GLIPR1L2Q4G1C9 344 aa1.96□□□□□ -2.1
SNORD48-201ENST00000364953 VWA3BQ502W6 1294 aa1.96□□□□□ -2.1
SNORD48-201ENST00000364953 CAVIN4Q5BKX8 364 aa1.96□□□□□ -2.1
SNORD48-201ENST00000364953 TNFAIP8L3Q5GJ75 292 aa1.96□□□□□ -2.1
SNORD48-201ENST00000364953 KIAA1755Q5JYT7 1200 aa1.96□□□□□ -2.1
SNORD48-201ENST00000364953 ZNF569Q5MCW4 686 aa1.96□□□□□ -2.1
SNORD48-201ENST00000364953 C1orf220Q5T0J3 134 aa1.96□□□□□ -2.1
SNORD48-201ENST00000364953 TTBK2Q6IQ55 1244 aa1.96□□□□□ -2.1
SNORD48-201ENST00000364953 PPP1R18Q6NYC8 613 aa1.96□□□□□ -2.1
SNORD48-201ENST00000364953 CDC42EP5Q6NZY7 148 aa1.96□□□□□ -2.1
SNORD48-201ENST00000364953 PDXDC1Q6P996 788 aa1.96□□□□□ -2.1
SNORD48-201ENST00000364953 MOXD1Q6UVY6 613 aa1.96□□□□□ -2.1
SNORD48-201ENST00000364953 HHIPL2Q6UWX4 724 aa1.96□□□□□ -2.1
SNORD48-201ENST00000364953 BTNL9Q6UXG8 535 aa1.96□□□□□ -2.1
SNORD48-201ENST00000364953 LRRC31Q6UY01 552 aa1.96□□□□□ -2.1
SNORD48-201ENST00000364953 CYP26C1Q6V0L0 522 aa1.96□□□□□ -2.1
SNORD48-201ENST00000364953 TPTE2Q6XPS3 522 aa1.96□□□□□ -2.1
SNORD48-201ENST00000364953 DTHD1Q6ZMT9 781 aa1.96□□□□□ -2.1
SNORD48-201ENST00000364953 UNC13DQ70J99 1090 aa1.96□□□□□ -2.1
SNORD48-201ENST00000364953 KRT25Q7Z3Z0 450 aa1.96□□□□□ -2.1
SNORD48-201ENST00000364953 NEK8Q86SG6 692 aa1.96□□□□□ -2.1
SNORD48-201ENST00000364953 CABP7Q86V35 215 aa1.96□□□□□ -2.1
SNORD48-201ENST00000364953 IQCA1Q86XH1 822 aa1.96□□□□□ -2.1
SNORD48-201ENST00000364953 POTEDQ86YR6 584 aa1.96□□□□□ -2.1
SNORD48-201ENST00000364953 CLEC10AQ8IUN9 316 aa1.96□□□□□ -2.1
SNORD48-201ENST00000364953 CNGA4Q8IV77 575 aa1.96□□□□□ -2.1
SNORD48-201ENST00000364953 TRIM59Q8IWR1 403 aa1.96□□□□□ -2.1
SNORD48-201ENST00000364953 SP8Q8IXZ3 490 aa1.96□□□□□ -2.1
SNORD48-201ENST00000364953 CCDC170Q8IYT3 715 aa1.96□□□□□ -2.1
SNORD48-201ENST00000364953 RASGEF1CQ8N431 466 aa1.96□□□□□ -2.1
SNORD48-201ENST00000364953 MREGQ8N565 214 aa1.96□□□□□ -2.1
SNORD48-201ENST00000364953 CCDC155Q8N6L0 562 aa1.96□□□□□ -2.1
SNORD48-201ENST00000364953 CEP112Q8N8E3 955 aa1.96□□□□□ -2.1
SNORD48-201ENST00000364953 LRRC57Q8N9N7 239 aa1.96□□□□□ -2.1
SNORD48-201ENST00000364953 RETREG2Q8NC44 543 aa1.96□□□□□ -2.1
SNORD48-201ENST00000364953 TSEN2Q8NCE0 465 aaKnown RBP1.96□□□□□ -2.1
SNORD48-201ENST00000364953 CTCFLQ8NI51 663 aaPredicted RBP1.96□□□□□ -2.1
SNORD48-201ENST00000364953 SLC30A5Q8TAD4 765 aa1.96□□□□□ -2.1
SNORD48-201ENST00000364953 LMO3Q8TAP4 145 aa1.96□□□□□ -2.1
SNORD48-201ENST00000364953 ETNPPLQ8TBG4 499 aa1.96□□□□□ -2.1
SNORD48-201ENST00000364953 RBM46Q8TBY0 533 aaKnown RBP1.96□□□□□ -2.1
SNORD48-201ENST00000364953 WDR66Q8TBY9 1149 aa1.96□□□□□ -2.1
SNORD48-201ENST00000364953 TBCKQ8TEA7 893 aa1.96□□□□□ -2.1
SNORD48-201ENST00000364953 SMCR8Q8TEV9 937 aaPredicted RBP1.96□□□□□ -2.1
SNORD48-201ENST00000364953 NOC3LQ8WTT2 800 aaKnown RBP1.96□□□□□ -2.1
SNORD48-201ENST00000364953 COG1Q8WTW3 980 aa1.96□□□□□ -2.1
SNORD48-201ENST00000364953 TGFBRAP1Q8WUH2 860 aa1.96□□□□□ -2.1
SNORD48-201ENST00000364953 CPLX3Q8WVH0 158 aa1.96□□□□□ -2.1
SNORD48-201ENST00000364953 UBXN4Q92575 508 aa1.96□□□□□ -2.1
SNORD48-201ENST00000364953 RAD54LQ92698 747 aa1.96□□□□□ -2.1
SNORD48-201ENST00000364953 SYN2Q92777 582 aaPredicted RBP1.96□□□□□ -2.1
SNORD48-201ENST00000364953 GOLGA1Q92805 767 aa1.96□□□□□ -2.1
SNORD48-201ENST00000364953 KCNN1Q92952 543 aa1.96□□□□□ -2.1
SNORD48-201ENST00000364953 CAVIN3Q969G5 261 aa1.96□□□□□ -2.1
SNORD48-201ENST00000364953 AKT1S1Q96B36 256 aa1.96□□□□□ -2.1
SNORD48-201ENST00000364953 ZBED3Q96IU2 234 aaPredicted RBP1.96□□□□□ -2.1
SNORD48-201ENST00000364953 CNOT6LQ96LI5 555 aaKnown RBP1.96□□□□□ -2.1
SNORD48-201ENST00000364953 NLRP3Q96P20 1036 aa1.96□□□□□ -2.1
SNORD48-201ENST00000364953 INPP4AQ96PE3 977 aaPredicted RBP1.96□□□□□ -2.1
SNORD48-201ENST00000364953 EYA3Q99504 573 aa1.96□□□□□ -2.1
SNORD48-201ENST00000364953 NAPGQ99747 312 aaPredicted RBP1.96□□□□□ -2.1
SNORD48-201ENST00000364953 HSD17B14Q9BPX1 270 aa1.96□□□□□ -2.1
SNORD48-201ENST00000364953 SLF1Q9BQI6 1058 aa1.96□□□□□ -2.1
SNORD48-201ENST00000364953 PYM1Q9BRP8 204 aaKnown RBP1.96□□□□□ -2.1
SNORD48-201ENST00000364953 TUBGCP2Q9BSJ2 902 aa1.96□□□□□ -2.1
SNORD48-201ENST00000364953 UBAC1Q9BSL1 405 aa1.96□□□□□ -2.1
SNORD48-201ENST00000364953 PAGR1Q9BTK6 254 aa1.96□□□□□ -2.1
SNORD48-201ENST00000364953 IDI2Q9BXS1 227 aa1.96□□□□□ -2.1
SNORD48-201ENST00000364953 CRNKL1Q9BZJ0 848 aaKnown RBP1.96□□□□□ -2.1
SNORD48-201ENST00000364953 NYXQ9GZU5 481 aa1.96□□□□□ -2.1
SNORD48-201ENST00000364953 UBA5Q9GZZ9 404 aa1.96□□□□□ -2.1
SNORD48-201ENST00000364953 EHD4Q9H223 541 aa1.96□□□□□ -2.1
SNORD48-201ENST00000364953 EPB41L4BQ9H329 900 aa1.96□□□□□ -2.1
SNORD48-201ENST00000364953 NDST4Q9H3R1 872 aa1.96□□□□□ -2.1
SNORD48-201ENST00000364953 SH2D4AQ9H788 454 aa1.96□□□□□ -2.1
SNORD48-201ENST00000364953 NHEJ1Q9H9Q4 299 aaPredicted RBP1.96□□□□□ -2.1
SNORD48-201ENST00000364953 MLXIPQ9HAP2 919 aa1.96□□□□□ -2.1
SNORD48-201ENST00000364953 MAGEF1Q9HAY2 307 aa1.96□□□□□ -2.1
SNORD48-201ENST00000364953 LRRC4CQ9HCJ2 640 aa1.96□□□□□ -2.1
SNORD48-201ENST00000364953 RIC8AQ9NPQ8 531 aa1.96□□□□□ -2.1
SNORD48-201ENST00000364953 LZTFL1Q9NQ48 299 aa1.96□□□□□ -2.1
SNORD48-201ENST00000364953 KCNQ5Q9NR82 932 aa1.96□□□□□ -2.1
SNORD48-201ENST00000364953 EXOC1Q9NV70 894 aa1.96□□□□□ -2.1
SNORD48-201ENST00000364953 GNL3LQ9NVN8 582 aaKnown RBP1.96□□□□□ -2.1
SNORD48-201ENST00000364953 DMAC2Q9NW81 257 aa1.96□□□□□ -2.1
SNORD48-201ENST00000364953 MCM9Q9NXL9 1143 aa1.96□□□□□ -2.1
SNORD48-201ENST00000364953 EHD2Q9NZN4 543 aa1.96□□□□□ -2.1
SNORD48-201ENST00000364953 AIPL1Q9NZN9 384 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms