RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 NPM2Q86SE8 214 aaKnown RBP7.11□□□□□ -1.27
RNU4-28P-201ENST00000364739 LDHDQ86WU2 507 aa7.11□□□□□ -1.27
RNU4-28P-201ENST00000364739 PPIL6Q8IXY8 311 aa7.11□□□□□ -1.27
RNU4-28P-201ENST00000364739 RCBTB1Q8NDN9 531 aa7.11□□□□□ -1.27
RNU4-28P-201ENST00000364739 PLEKHO2Q8TD55 490 aa7.11□□□□□ -1.27
RNU4-28P-201ENST00000364739 DIO2Q92813 273 aa7.11□□□□□ -1.27
RNU4-28P-201ENST00000364739 C1orf159Q96HA4 380 aa7.11□□□□□ -1.27
RNU4-28P-201ENST00000364739 BLACEA4D250 179 aa7.1□□□□□ -1.27
RNU4-28P-201ENST00000364739 HRKO00198 91 aa7.1□□□□□ -1.27
RNU4-28P-201ENST00000364739 PDPK1O15530 556 aa7.1□□□□□ -1.27
RNU4-28P-201ENST00000364739 MEFVO15553 781 aaPredicted RBP7.1□□□□□ -1.27
RNU4-28P-201ENST00000364739 PRODHO43272 600 aa7.1□□□□□ -1.27
RNU4-28P-201ENST00000364739 SRGAP3O43295 1099 aa7.1□□□□□ -1.27
RNU4-28P-201ENST00000364739 DLX3O60479 287 aa7.1□□□□□ -1.27
RNU4-28P-201ENST00000364739 FPR2P25090 351 aa7.1□□□□□ -1.27
RNU4-28P-201ENST00000364739 BCL6P41182 706 aa7.1□□□□□ -1.27
RNU4-28P-201ENST00000364739 MAPKAPK2P49137 400 aa7.1□□□□□ -1.27
RNU4-28P-201ENST00000364739 LINC00310P59036 64 aa7.1□□□□□ -1.27
RNU4-28P-201ENST00000364739 RBL2Q08999 1139 aa7.1□□□□□ -1.27
RNU4-28P-201ENST00000364739 ZSCAN18Q8TBC5 510 aaPredicted RBP7.1□□□□□ -1.27
RNU4-28P-201ENST00000364739 PMFBP1Q8TBY8 1022 aa7.1□□□□□ -1.27
RNU4-28P-201ENST00000364739 MZB1Q8WU39 189 aa7.1□□□□□ -1.27
RNU4-28P-201ENST00000364739 CCDC140Q96MF4 163 aa7.1□□□□□ -1.27
RNU4-28P-201ENST00000364739 IRF2BPLQ9H1B7 796 aa7.1□□□□□ -1.27
RNU4-28P-201ENST00000364739 ARHGEF4Q9NR80 690 aa7.1□□□□□ -1.27
RNU4-28P-201ENST00000364739 MSRB2Q9Y3D2 182 aa7.1□□□□□ -1.27
RNU4-28P-201ENST00000364739 PCDHA2Q9Y5H9 948 aa7.1□□□□□ -1.27
RNU4-28P-201ENST00000364739 FAM221BA6H8Z2 402 aa7.09□□□□□ -1.27
RNU4-28P-201ENST00000364739 C22orf46C9J442 243 aa7.09□□□□□ -1.27
RNU4-28P-201ENST00000364739 N4BP3O15049 544 aa7.09□□□□□ -1.27
RNU4-28P-201ENST00000364739 CPP00450 1065 aa7.09□□□□□ -1.27
RNU4-28P-201ENST00000364739 HSP90AA2PQ14568 343 aaPredicted RBP7.09□□□□□ -1.27
RNU4-28P-201ENST00000364739 SLC35F1Q5T1Q4 408 aa7.09□□□□□ -1.27
RNU4-28P-201ENST00000364739 CEP68Q76N32 757 aa7.09□□□□□ -1.27
RNU4-28P-201ENST00000364739 C1QL4Q86Z23 238 aa7.09□□□□□ -1.27
RNU4-28P-201ENST00000364739 IGDCC3Q8IVU1 814 aa7.09□□□□□ -1.27
RNU4-28P-201ENST00000364739 LRRC56Q8IYG6 542 aaPredicted RBP7.09□□□□□ -1.27
RNU4-28P-201ENST00000364739 ST13P5Q8NFI4 369 aaPredicted RBP7.09□□□□□ -1.27
RNU4-28P-201ENST00000364739 CHAMP1Q96JM3 812 aa7.09□□□□□ -1.27
RNU4-28P-201ENST00000364739 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.09□□□□□ -1.27
RNU4-28P-201ENST00000364739 CNOT6Q9ULM6 557 aaKnown RBP7.09□□□□□ -1.27
RNU4-28P-201ENST00000364739 KCTD3Q9Y597 815 aa7.09□□□□□ -1.27
RNU4-28P-201ENST00000364739 PCDHA5Q9Y5H7 936 aa7.09□□□□□ -1.27
RNU4-28P-201ENST00000364739 TIMM13Q9Y5L4 95 aaPredicted RBP7.09□□□□□ -1.27
RNU4-28P-201ENST00000364739 ADAMTS20P59510 1910 aa7.09□□□□□ -1.27
RNU4-28P-201ENST00000364739 DIAPH1O60610 1272 aaKnown RBP7.08□□□□□ -1.28
RNU4-28P-201ENST00000364739 PI3P19957 117 aa7.08□□□□□ -1.28
RNU4-28P-201ENST00000364739 TMEM62Q0P6H9 643 aa7.08□□□□□ -1.28
RNU4-28P-201ENST00000364739 OLFML2BQ68BL8 750 aa7.08□□□□□ -1.28
RNU4-28P-201ENST00000364739 IQCEQ6IPM2 695 aa7.08□□□□□ -1.28
RNU4-28P-201ENST00000364739 USP53Q70EK8 1073 aa7.08□□□□□ -1.28
RNU4-28P-201ENST00000364739 CABP7Q86V35 215 aa7.08□□□□□ -1.28
RNU4-28P-201ENST00000364739 SIAH1Q8IUQ4 282 aa7.08□□□□□ -1.28
RNU4-28P-201ENST00000364739 DNAJC2Q99543 621 aaKnown RBP7.08□□□□□ -1.28
RNU4-28P-201ENST00000364739 AARSD1Q9BTE6 412 aaKnown RBP7.08□□□□□ -1.28
RNU4-28P-201ENST00000364739 HIRIP3Q9BW71 556 aaPredicted RBP7.08□□□□□ -1.28
RNU4-28P-201ENST00000364739 KRTAP4-5Q9BYR2 181 aa7.08□□□□□ -1.28
RNU4-28P-201ENST00000364739 EPB41L4AQ9HCS5 686 aaPredicted RBP7.08□□□□□ -1.28
RNU4-28P-201ENST00000364739 NUAK1O60285 661 aa7.07□□□□□ -1.28
RNU4-28P-201ENST00000364739 BUB1BO60566 1050 aaPredicted RBP7.07□□□□□ -1.28
RNU4-28P-201ENST00000364739 MSCO60682 206 aa7.07□□□□□ -1.28
RNU4-28P-201ENST00000364739 MC3RP41968 323 aa7.07□□□□□ -1.28
RNU4-28P-201ENST00000364739 RPL11P62913 178 aaKnown RBP7.07□□□□□ -1.28
RNU4-28P-201ENST00000364739 MTERF2Q49AM1 385 aa7.07□□□□□ -1.28
RNU4-28P-201ENST00000364739 E4F1Q66K89 784 aaPredicted RBP7.07□□□□□ -1.28
RNU4-28P-201ENST00000364739 WWC2Q6AWC2 1192 aa7.07□□□□□ -1.28
RNU4-28P-201ENST00000364739 NLRP10Q86W26 655 aa7.07□□□□□ -1.28
RNU4-28P-201ENST00000364739 TMEFF1Q8IYR6 380 aa7.07□□□□□ -1.28
RNU4-28P-201ENST00000364739 KCTD13Q8WZ19 329 aa7.07□□□□□ -1.28
RNU4-28P-201ENST00000364739 OSBP2Q969R2 916 aa7.07□□□□□ -1.28
RNU4-28P-201ENST00000364739 SGSM3Q96HU1 749 aa7.07□□□□□ -1.28
RNU4-28P-201ENST00000364739 SPATA9Q9BWV2 254 aa7.07□□□□□ -1.28
RNU4-28P-201ENST00000364739 CCDC113Q9H0I3 377 aa7.07□□□□□ -1.28
RNU4-28P-201ENST00000364739 SIRPGQ9P1W8 387 aa7.07□□□□□ -1.28
RNU4-28P-201ENST00000364739 IRAK3Q9Y616 596 aa7.07□□□□□ -1.28
RNU4-28P-201ENST00000364739 IQCA1LA6NCM1 817 aa7.06□□□□□ -1.28
RNU4-28P-201ENST00000364739 PABPC1P11940 636 aaKnown RBP7.06□□□□□ -1.28
RNU4-28P-201ENST00000364739 ATF2P15336 505 aa7.06□□□□□ -1.28
RNU4-28P-201ENST00000364739 LTBRP36941 435 aa7.06□□□□□ -1.28
RNU4-28P-201ENST00000364739 LIMS1P48059 325 aa7.06□□□□□ -1.28
RNU4-28P-201ENST00000364739 SERINC3Q13530 473 aa7.06□□□□□ -1.28
RNU4-28P-201ENST00000364739 NTRK3Q16288 839 aa7.06□□□□□ -1.28
RNU4-28P-201ENST00000364739 VMACQ2NL98 169 aa7.06□□□□□ -1.28
RNU4-28P-201ENST00000364739 ACBD5Q5T8D3 534 aaPredicted RBP7.06□□□□□ -1.28
RNU4-28P-201ENST00000364739 FOXB2Q5VYV0 432 aa7.06□□□□□ -1.28
RNU4-28P-201ENST00000364739 KCNT2Q6UVM3 1135 aa7.06□□□□□ -1.28
RNU4-28P-201ENST00000364739 NSMFQ6X4W1 530 aa7.06□□□□□ -1.28
RNU4-28P-201ENST00000364739 LCNL1Q6ZST4 164 aa7.06□□□□□ -1.28
RNU4-28P-201ENST00000364739 TRMT2BQ96GJ1 504 aaKnown RBP7.06□□□□□ -1.28
RNU4-28P-201ENST00000364739 SIGLEC10Q96LC7 697 aa7.06□□□□□ -1.28
RNU4-28P-201ENST00000364739 IRS2Q9Y4H2 1338 aa7.05□□□□□ -1.28
RNU4-28P-201ENST00000364739 SSRP1Q08945 709 aaKnown RBP7.05□□□□□ -1.28
RNU4-28P-201ENST00000364739 MAP4K2Q12851 820 aa7.05□□□□□ -1.28
RNU4-28P-201ENST00000364739 KCNAB2Q13303 367 aa7.05□□□□□ -1.28
RNU4-28P-201ENST00000364739 RASGRF1Q13972 1273 aa7.05□□□□□ -1.28
RNU4-28P-201ENST00000364739 NBPF6Q5VWK0 638 aa7.05□□□□□ -1.28
RNU4-28P-201ENST00000364739 CIAPIN1Q6FI81 312 aa7.05□□□□□ -1.28
RNU4-28P-201ENST00000364739 LILRA6Q6PI73 481 aa7.05□□□□□ -1.28
RNU4-28P-201ENST00000364739 ALG3Q92685 438 aa7.05□□□□□ -1.28
RNU4-28P-201ENST00000364739 TMEM169Q96HH4 297 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms