RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 CKAP4Q07065 602 aaKnown RBP9.57□□□□□ -0.88
RFX3-202ENST00000358730 PICALMQ13492 652 aa9.57□□□□□ -0.88
RFX3-202ENST00000358730 COBLL1Q53SF7 1204 aa9.57□□□□□ -0.88
RFX3-202ENST00000358730 FIGNQ5HY92 759 aa9.57□□□□□ -0.88
RFX3-202ENST00000358730 PAPD7Q5XG87 772 aaKnown RBP9.57□□□□□ -0.88
RFX3-202ENST00000358730 UNC13DQ70J99 1090 aa9.57□□□□□ -0.88
RFX3-202ENST00000358730 DYMQ7RTS9 669 aa9.57□□□□□ -0.88
RFX3-202ENST00000358730 SLF2Q8IX21 1173 aa9.57□□□□□ -0.88
RFX3-202ENST00000358730 CAGE1Q8TC20 777 aa9.57□□□□□ -0.88
RFX3-202ENST00000358730 MTMR9Q96QG7 549 aa9.57□□□□□ -0.88
RFX3-202ENST00000358730 MMS19Q96T76 1030 aa9.57□□□□□ -0.88
RFX3-202ENST00000358730 RIOX1Q9H6W3 641 aa9.57□□□□□ -0.88
RFX3-202ENST00000358730 BLOC1S4Q9NUP1 217 aa9.57□□□□□ -0.88
RFX3-202ENST00000358730 A0A1W2PQJ5 194 aa9.57□□□□□ -0.88
RFX3-202ENST00000358730 hCG_1984214I3L0E3 225 aa9.57□□□□□ -0.88
RFX3-202ENST00000358730 IDEP14735 1019 aa9.57□□□□□ -0.88
RFX3-202ENST00000358730 TNNI2P48788 182 aa9.57□□□□□ -0.88
RFX3-202ENST00000358730 FXR2P51116 673 aaKnown RBP eCLIP9.57□□□□□ -0.88
RFX3-202ENST00000358730 KIF5AQ12840 1032 aa9.57□□□□□ -0.88
RFX3-202ENST00000358730 SPA17Q15506 151 aa9.57□□□□□ -0.88
RFX3-202ENST00000358730 CENPPQ6IPU0 288 aa9.57□□□□□ -0.88
RFX3-202ENST00000358730 WDR93Q6P2C0 686 aa9.57□□□□□ -0.88
RFX3-202ENST00000358730 CLEC10AQ8IUN9 316 aa9.57□□□□□ -0.88
RFX3-202ENST00000358730 ZNF713Q8N859 430 aaPredicted RBP9.57□□□□□ -0.88
RFX3-202ENST00000358730 SNX29Q8TEQ0 813 aa9.57□□□□□ -0.88
RFX3-202ENST00000358730 CCDC42Q96M95 316 aa9.57□□□□□ -0.88
RFX3-202ENST00000358730 RAB34Q9BZG1 259 aa9.57□□□□□ -0.88
RFX3-202ENST00000358730 FAM207AQ9NSI2 230 aaPredicted RBP9.57□□□□□ -0.88
RFX3-202ENST00000358730 ADAM21Q9UKJ8 722 aa9.57□□□□□ -0.88
RFX3-202ENST00000358730 DUSP10Q9Y6W6 482 aa9.57□□□□□ -0.88
RFX3-202ENST00000358730 GAKO14976 1311 aa9.56□□□□□ -0.88
RFX3-202ENST00000358730 N4BP1O75113 896 aaKnown RBP9.56□□□□□ -0.88
RFX3-202ENST00000358730 PLEKP08567 350 aaPredicted RBP9.56□□□□□ -0.88
RFX3-202ENST00000358730 LMAN1P49257 510 aa9.56□□□□□ -0.88
RFX3-202ENST00000358730 VAV2P52735 878 aa9.56□□□□□ -0.88
RFX3-202ENST00000358730 USP14P54578 494 aa9.56□□□□□ -0.88
RFX3-202ENST00000358730 CCDC96Q2M329 555 aa9.56□□□□□ -0.88
RFX3-202ENST00000358730 VWA3BQ502W6 1294 aa9.56□□□□□ -0.88
RFX3-202ENST00000358730 ASPRV1Q53RT3 343 aa9.56□□□□□ -0.88
RFX3-202ENST00000358730 SECISBP2LQ93073 1101 aaKnown RBP9.56□□□□□ -0.88
RFX3-202ENST00000358730 CCDC102AQ96A19 550 aa9.56□□□□□ -0.88
RFX3-202ENST00000358730 EXOC4Q96A65 974 aa9.56□□□□□ -0.88
RFX3-202ENST00000358730 PNMA5Q96PV4 448 aa9.56□□□□□ -0.88
RFX3-202ENST00000358730 PLIN4Q96Q06 1357 aa9.56□□□□□ -0.88
RFX3-202ENST00000358730 HNRNPH2P55795 449 aaKnown RBP9.56□□□□□ -0.88
RFX3-202ENST00000358730 HSP90B2PQ58FF3 399 aa9.56□□□□□ -0.88
RFX3-202ENST00000358730 KRT26Q7Z3Y9 468 aa9.56□□□□□ -0.88
RFX3-202ENST00000358730 C2CD5Q86YS7 1000 aa9.56□□□□□ -0.88
RFX3-202ENST00000358730 MSL3Q8N5Y2 521 aaKnown RBP9.56□□□□□ -0.88
RFX3-202ENST00000358730 TBC1D22AQ8WUA7 517 aa9.56□□□□□ -0.88
RFX3-202ENST00000358730 IQCDQ96DY2 449 aa9.56□□□□□ -0.88
RFX3-202ENST00000358730 TSGA10Q9BZW7 698 aa9.56□□□□□ -0.88
RFX3-202ENST00000358730 ACBD3Q9H3P7 528 aa9.56□□□□□ -0.88
RFX3-202ENST00000358730 NDST4Q9H3R1 872 aa9.56□□□□□ -0.88
RFX3-202ENST00000358730 GPCPD1Q9NPB8 672 aa9.56□□□□□ -0.88
RFX3-202ENST00000358730 JADE2Q9NQC1 790 aa9.56□□□□□ -0.88
RFX3-202ENST00000358730 MTMR4Q9NYA4 1195 aa9.56□□□□□ -0.88
RFX3-202ENST00000358730 PVALEFA0A1B0GWK0 134 aa9.55□□□□□ -0.88
RFX3-202ENST00000358730 ANO9A1A5B4 782 aa9.55□□□□□ -0.88
RFX3-202ENST00000358730 EPHB6O15197 1021 aa9.55□□□□□ -0.88
RFX3-202ENST00000358730 ERCC3P19447 782 aa9.55□□□□□ -0.88
RFX3-202ENST00000358730 TNNT3P45378 269 aaPredicted RBP9.55□□□□□ -0.88
RFX3-202ENST00000358730 NOVP48745 357 aa9.55□□□□□ -0.88
RFX3-202ENST00000358730 CDK17Q00537 523 aa9.55□□□□□ -0.88
RFX3-202ENST00000358730 CRY2Q49AN0 593 aa9.55□□□□□ -0.88
RFX3-202ENST00000358730 KRT79Q5XKE5 535 aa9.55□□□□□ -0.88
RFX3-202ENST00000358730 DPP8Q6V1X1 898 aaPredicted RBP9.55□□□□□ -0.88
RFX3-202ENST00000358730 GPIHBP1Q8IV16 184 aa9.55□□□□□ -0.88
RFX3-202ENST00000358730 RAD54LQ92698 747 aa9.55□□□□□ -0.88
RFX3-202ENST00000358730 RPGRIP1Q96KN7 1286 aa9.55□□□□□ -0.88
RFX3-202ENST00000358730 IFIH1Q9BYX4 1025 aaKnown RBP9.55□□□□□ -0.88
RFX3-202ENST00000358730 DEF6Q9H4E7 631 aa9.55□□□□□ -0.88
RFX3-202ENST00000358730 MMRN2Q9H8L6 949 aa9.55□□□□□ -0.88
RFX3-202ENST00000358730 DAGLAQ9Y4D2 1042 aa9.55□□□□□ -0.88
RFX3-202ENST00000358730 LRRIQ3A6PVS8 624 aaPredicted RBP9.55□□□□□ -0.88
RFX3-202ENST00000358730 C6orf229H3BNL8 230 aa9.55□□□□□ -0.88
RFX3-202ENST00000358730 ZNF263O14978 683 aa9.55□□□□□ -0.88
RFX3-202ENST00000358730 ZNF185O15231 689 aa9.55□□□□□ -0.88
RFX3-202ENST00000358730 FGFR1OPO95684 399 aaKnown RBP9.55□□□□□ -0.88
RFX3-202ENST00000358730 AKR1B1P15121 316 aa9.55□□□□□ -0.88
RFX3-202ENST00000358730 MCM3P25205 808 aa9.55□□□□□ -0.88
RFX3-202ENST00000358730 MAN2A1Q16706 1144 aa9.55□□□□□ -0.88
RFX3-202ENST00000358730 UBE2SQ16763 222 aa9.55□□□□□ -0.88
RFX3-202ENST00000358730 MAP9Q49MG5 647 aa9.55□□□□□ -0.88
RFX3-202ENST00000358730 GUF1Q8N442 669 aaKnown RBP9.55□□□□□ -0.88
RFX3-202ENST00000358730 FAM163AQ96GL9 167 aaPredicted RBP9.55□□□□□ -0.88
RFX3-202ENST00000358730 RBM17Q96I25 401 aaKnown RBP9.55□□□□□ -0.88
RFX3-202ENST00000358730 PURBQ96QR8 312 aaKnown RBP9.55□□□□□ -0.88
RFX3-202ENST00000358730 NUDT12Q9BQG2 462 aa9.55□□□□□ -0.88
RFX3-202ENST00000358730 POLLQ9UGP5 575 aa9.55□□□□□ -0.88
RFX3-202ENST00000358730 PLAGL2Q9UPG8 496 aa9.55□□□□□ -0.88
RFX3-202ENST00000358730 SIK3Q9Y2K2 1263 aa9.55□□□□□ -0.88
RFX3-202ENST00000358730 FAN1Q9Y2M0 1017 aa9.55□□□□□ -0.88
RFX3-202ENST00000358730 MYH7BA7E2Y1 1941 aa9.55□□□□□ -0.88
RFX3-202ENST00000358730 THSD7AQ9UPZ6 1657 aa9.55□□□□□ -0.88
RFX3-202ENST00000358730 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.54□□□□□ -0.88
RFX3-202ENST00000358730 KIF11P52732 1056 aa9.54□□□□□ -0.88
RFX3-202ENST00000358730 LRRC63Q05C16 580 aa9.54□□□□□ -0.88
RFX3-202ENST00000358730 KCNK18Q7Z418 384 aa9.54□□□□□ -0.88
RFX3-202ENST00000358730 TBC1D16Q8TBP0 767 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms