RNA–Protein interactions for RNA: ENST00000358552.7

NFIX-201, Transcript of nuclear factor I X, humanhuman

TSL 5 BASIC

Gene NFIX, Length 1,727 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-201ENST00000358552 USP17L13C9JLJ4 530 aa14.97□□□□□ -0.01
NFIX-201ENST00000358552 USP17L11C9JVI0 530 aa14.97□□□□□ -0.01
NFIX-201ENST00000358552 USP17L18D6R9N7 530 aa14.97□□□□□ -0.01
NFIX-201ENST00000358552 USP17L22D6RA61 530 aa14.97□□□□□ -0.01
NFIX-201ENST00000358552 USP17L17D6RBQ6 530 aa14.97□□□□□ -0.01
NFIX-201ENST00000358552 USP17L19D6RCP7 530 aa14.97□□□□□ -0.01
NFIX-201ENST00000358552 USP17L20D6RJB6 530 aa14.97□□□□□ -0.01
NFIX-201ENST00000358552 INPP5BP32019 993 aa14.97□□□□□ -0.01
NFIX-201ENST00000358552 ARHGAP4P98171 946 aa14.97□□□□□ -0.01
NFIX-201ENST00000358552 USP17L24Q0WX57 530 aa14.97□□□□□ -0.01
NFIX-201ENST00000358552 UBE2SQ16763 222 aa14.97□□□□□ -0.01
NFIX-201ENST00000358552 USH1GQ495M9 461 aa14.97□□□□□ -0.01
NFIX-201ENST00000358552 DNTTIP2Q5QJE6 756 aaKnown RBP14.97□□□□□ -0.01
NFIX-201ENST00000358552 KRT79Q5XKE5 535 aa14.97□□□□□ -0.01
NFIX-201ENST00000358552 USP17L6PQ6QN14 398 aa14.97□□□□□ -0.01
NFIX-201ENST00000358552 USP49Q70CQ1 688 aa14.97□□□□□ -0.01
NFIX-201ENST00000358552 CABP7Q86V35 215 aa14.97□□□□□ -0.01
NFIX-201ENST00000358552 LDHDQ86WU2 507 aa14.97□□□□□ -0.01
NFIX-201ENST00000358552 CRYGNQ8WXF5 182 aa14.97□□□□□ -0.01
NFIX-201ENST00000358552 NT5C3AQ9H0P0 336 aa14.97□□□□□ -0.01
NFIX-201ENST00000358552 SLC38A10Q9HBR0 1119 aa14.97□□□□□ -0.01
NFIX-201ENST00000358552 HOXC10Q9NYD6 342 aa14.97□□□□□ -0.01
NFIX-201ENST00000358552 LRWD1Q9UFC0 647 aa14.97□□□□□ -0.01
NFIX-201ENST00000358552 PCDHA12Q9UN75 941 aa14.97□□□□□ -0.01
NFIX-201ENST00000358552 CSADQ9Y600 493 aa14.97□□□□□ -0.01
NFIX-201ENST00000358552 KDM3AQ9Y4C1 1321 aa14.96□□□□□ -0.01
NFIX-201ENST00000358552 SPP2Q13103 211 aa14.96□□□□□ -0.01
NFIX-201ENST00000358552 EAPPQ56P03 285 aaPredicted RBP14.96□□□□□ -0.01
NFIX-201ENST00000358552 SH3D19Q5HYK7 790 aa14.96□□□□□ -0.01
NFIX-201ENST00000358552 KIAA1755Q5JYT7 1200 aa14.96□□□□□ -0.01
NFIX-201ENST00000358552 LUZP1Q86V48 1076 aa14.96□□□□□ -0.01
NFIX-201ENST00000358552 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.96□□□□□ -0.01
NFIX-201ENST00000358552 RRAGCQ9HB90 399 aa14.96□□□□□ -0.01
NFIX-201ENST00000358552 SPTLC3Q9NUV7 552 aa14.96□□□□□ -0.01
NFIX-201ENST00000358552 DOCK1Q14185 1865 aa14.96□□□□□ -0.01
NFIX-201ENST00000358552 FLOT1O75955 427 aa14.95□□□□□ -0.02
NFIX-201ENST00000358552 VCAM1P19320 739 aa14.95□□□□□ -0.02
NFIX-201ENST00000358552 TECP42680 631 aa14.95□□□□□ -0.02
NFIX-201ENST00000358552 TXKP42681 527 aa14.95□□□□□ -0.02
NFIX-201ENST00000358552 DPYDQ12882 1025 aa14.95□□□□□ -0.02
NFIX-201ENST00000358552 MTMR2Q13614 643 aa14.95□□□□□ -0.02
NFIX-201ENST00000358552 MORC3Q14149 939 aa14.95□□□□□ -0.02
NFIX-201ENST00000358552 NOLC1Q14978 699 aaKnown RBP eCLIP14.95□□□□□ -0.02
NFIX-201ENST00000358552 ZYXQ15942 572 aaKnown RBP14.95□□□□□ -0.02
NFIX-201ENST00000358552 TKFCQ3LXA3 575 aa14.95□□□□□ -0.02
NFIX-201ENST00000358552 HAUS3Q68CZ6 603 aa14.95□□□□□ -0.02
NFIX-201ENST00000358552 PDXDC2PQ6P474 469 aa14.95□□□□□ -0.02
NFIX-201ENST00000358552 KRT26Q7Z3Y9 468 aa14.95□□□□□ -0.02
NFIX-201ENST00000358552 POTEDQ86YR6 584 aa14.95□□□□□ -0.02
NFIX-201ENST00000358552 ERMNQ8TAM6 284 aa14.95□□□□□ -0.02
NFIX-201ENST00000358552 CDK5RAP3Q96JB5 506 aa14.95□□□□□ -0.02
NFIX-201ENST00000358552 TANGO6Q9C0B7 1094 aa14.95□□□□□ -0.02
NFIX-201ENST00000358552 TTC12Q9H892 705 aaPredicted RBP14.95□□□□□ -0.02
NFIX-201ENST00000358552 EMILIN3Q9NT22 766 aa14.95□□□□□ -0.02
NFIX-201ENST00000358552 KBTBD4Q9NVX7 518 aa14.95□□□□□ -0.02
NFIX-201ENST00000358552 CCPG1Q9ULG6 757 aa14.95□□□□□ -0.02
NFIX-201ENST00000358552 ZHX2Q9Y6X8 837 aa14.95□□□□□ -0.02
NFIX-201ENST00000358552 ZNF76P36508 570 aa14.95□□□□□ -0.02
NFIX-201ENST00000358552 SETQ01105 290 aaPredicted RBP14.95□□□□□ -0.02
NFIX-201ENST00000358552 KCNB1Q14721 858 aa14.95□□□□□ -0.02
NFIX-201ENST00000358552 COG2Q14746 738 aa14.95□□□□□ -0.02
NFIX-201ENST00000358552 UBE2Q2Q8WVN8 375 aa14.95□□□□□ -0.02
NFIX-201ENST00000358552 GLIS2Q9BZE0 524 aaPredicted RBP14.95□□□□□ -0.02
NFIX-201ENST00000358552 KCNMB3Q9NPA1 279 aa14.95□□□□□ -0.02
NFIX-201ENST00000358552 UQCRHLA0A096LP55 91 aa14.94□□□□□ -0.02
NFIX-201ENST00000358552 ATP2A1O14983 1001 aa14.94□□□□□ -0.02
NFIX-201ENST00000358552 USP2O75604 605 aaPredicted RBP14.94□□□□□ -0.02
NFIX-201ENST00000358552 TDP2O95551 362 aa14.94□□□□□ -0.02
NFIX-201ENST00000358552 UQCRHP07919 91 aa14.94□□□□□ -0.02
NFIX-201ENST00000358552 MYL5Q02045 173 aa14.94□□□□□ -0.02
NFIX-201ENST00000358552 DPCR1Q3MIW9 517 aa14.94□□□□□ -0.02
NFIX-201ENST00000358552 PRAMEF18Q5VWM3 479 aa14.94□□□□□ -0.02
NFIX-201ENST00000358552 CCDC174Q6PII3 467 aa14.94□□□□□ -0.02
NFIX-201ENST00000358552 C11orf57Q6ZUT1 292 aaPredicted RBP14.94□□□□□ -0.02
NFIX-201ENST00000358552 RPAP3Q9H6T3 665 aaPredicted RBP14.94□□□□□ -0.02
NFIX-201ENST00000358552 MAN1B1Q9UKM7 699 aa14.94□□□□□ -0.02
NFIX-201ENST00000358552 AFG3L2Q9Y4W6 797 aa14.94□□□□□ -0.02
NFIX-201ENST00000358552 CFBP00751 764 aa14.93□□□□□ -0.02
NFIX-201ENST00000358552 CDC25BP30305 580 aa14.93□□□□□ -0.02
NFIX-201ENST00000358552 HSD17B4P51659 736 aa14.93□□□□□ -0.02
NFIX-201ENST00000358552 PPATQ06203 517 aa14.93□□□□□ -0.02
NFIX-201ENST00000358552 HYIQ5T013 277 aa14.93□□□□□ -0.02
NFIX-201ENST00000358552 XRRA1Q6P2D8 792 aa14.93□□□□□ -0.02
NFIX-201ENST00000358552 DHX40Q8IX18 779 aaKnown RBP14.93□□□□□ -0.02
NFIX-201ENST00000358552 ENOX1Q8TC92 643 aaKnown RBP14.93□□□□□ -0.02
NFIX-201ENST00000358552 ZKSCAN4Q969J2 545 aaPredicted RBP14.93□□□□□ -0.02
NFIX-201ENST00000358552 MRFAP1L1Q96HT8 127 aa14.93□□□□□ -0.02
NFIX-201ENST00000358552 TRIM5Q9C035 493 aa14.93□□□□□ -0.02
NFIX-201ENST00000358552 A0A087X0B3 334 aa14.92□□□□□ -0.02
NFIX-201ENST00000358552 ADM5C9JUS6 153 aa14.92□□□□□ -0.02
NFIX-201ENST00000358552 BIN1O00499 593 aa14.92□□□□□ -0.02
NFIX-201ENST00000358552 CXCL11O14625 94 aa14.92□□□□□ -0.02
NFIX-201ENST00000358552 SLC37A4O43826 429 aa14.92□□□□□ -0.02
NFIX-201ENST00000358552 MUTP22033 750 aa14.92□□□□□ -0.02
NFIX-201ENST00000358552 AFMP43652 599 aa14.92□□□□□ -0.02
NFIX-201ENST00000358552 PLCB2Q00722 1185 aa14.92□□□□□ -0.02
NFIX-201ENST00000358552 KARSQ15046 597 aaKnown RBP14.92□□□□□ -0.02
NFIX-201ENST00000358552 SV2BQ7L1I2 683 aa14.92□□□□□ -0.02
NFIX-201ENST00000358552 NIPA1Q7RTP0 329 aa14.92□□□□□ -0.02
NFIX-201ENST00000358552 ANKRD13AQ8IZ07 590 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms