RNA–Protein interactions for RNA: ENST00000358207.9

SMARCAL1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SMARCAL1, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-202ENST00000358207 PCMTD2Q9NV79 361 aa10.34□□□□□ -0.75
SMARCAL1-202ENST00000358207 BAIAP2L1Q9UHR4 511 aa10.34□□□□□ -0.75
SMARCAL1-202ENST00000358207 CA12O43570 354 aa10.34□□□□□ -0.75
SMARCAL1-202ENST00000358207 STX10O60499 249 aa10.34□□□□□ -0.75
SMARCAL1-202ENST00000358207 ZNF24P17028 368 aa10.34□□□□□ -0.75
SMARCAL1-202ENST00000358207 CTCFP49711 727 aaPredicted RBP10.34□□□□□ -0.75
SMARCAL1-202ENST00000358207 TUBB4BP68371 445 aa10.34□□□□□ -0.75
SMARCAL1-202ENST00000358207 ELF3P78545 371 aaPredicted RBP10.34□□□□□ -0.75
SMARCAL1-202ENST00000358207 GUCY1A3Q02108 690 aa10.34□□□□□ -0.75
SMARCAL1-202ENST00000358207 SLC4A8Q2Y0W8 1093 aa10.34□□□□□ -0.75
SMARCAL1-202ENST00000358207 OLFM4Q6UX06 510 aa10.34□□□□□ -0.75
SMARCAL1-202ENST00000358207 SH2D3CQ8N5H7 860 aa10.34□□□□□ -0.75
SMARCAL1-202ENST00000358207 ZFAND2BQ8WV99 257 aa10.34□□□□□ -0.75
SMARCAL1-202ENST00000358207 CCT8L2Q96SF2 557 aa10.34□□□□□ -0.75
SMARCAL1-202ENST00000358207 OCEL1Q9H607 264 aa10.34□□□□□ -0.75
SMARCAL1-202ENST00000358207 MED23Q9ULK4 1368 aa10.33□□□□□ -0.76
SMARCAL1-202ENST00000358207 IKBKBO14920 756 aa10.33□□□□□ -0.76
SMARCAL1-202ENST00000358207 SMIM24O75264 130 aa10.33□□□□□ -0.76
SMARCAL1-202ENST00000358207 MCAMP43121 646 aa10.33□□□□□ -0.76
SMARCAL1-202ENST00000358207 TBX2Q13207 712 aaPredicted RBP10.33□□□□□ -0.76
SMARCAL1-202ENST00000358207 TNIP1Q15025 636 aa10.33□□□□□ -0.76
SMARCAL1-202ENST00000358207 CFAP100Q494V2 611 aa10.33□□□□□ -0.76
SMARCAL1-202ENST00000358207 CCDC152Q4G0S7 254 aa10.33□□□□□ -0.76
SMARCAL1-202ENST00000358207 ANKRD20A8PQ5CZ79 823 aa10.33□□□□□ -0.76
SMARCAL1-202ENST00000358207 CHST3Q7LGC8 479 aa10.33□□□□□ -0.76
SMARCAL1-202ENST00000358207 SLC35F6Q8N357 371 aa10.33□□□□□ -0.76
SMARCAL1-202ENST00000358207 JAKMIP1Q96N16 626 aaKnown RBP10.33□□□□□ -0.76
SMARCAL1-202ENST00000358207 ACTR5Q9H9F9 607 aaPredicted RBP10.33□□□□□ -0.76
SMARCAL1-202ENST00000358207 SAGE1Q9NXZ1 904 aa10.33□□□□□ -0.76
SMARCAL1-202ENST00000358207 SLC5A4Q9NY91 659 aa10.33□□□□□ -0.76
SMARCAL1-202ENST00000358207 ABCF2Q9UG63 623 aa10.33□□□□□ -0.76
SMARCAL1-202ENST00000358207 OTOFQ9HC10 1997 aa10.33□□□□□ -0.76
SMARCAL1-202ENST00000358207 GOLGA6L7A0A1B0GV03 622 aa10.33□□□□□ -0.76
SMARCAL1-202ENST00000358207 DPPA5A6NC42 116 aa10.33□□□□□ -0.76
SMARCAL1-202ENST00000358207 IGHMBP2P38935 993 aaKnown RBP10.33□□□□□ -0.76
SMARCAL1-202ENST00000358207 ZNF280AP59817 542 aaPredicted RBP10.33□□□□□ -0.76
SMARCAL1-202ENST00000358207 FAM160A1Q05DH4 1040 aa10.33□□□□□ -0.76
SMARCAL1-202ENST00000358207 ATL3Q6DD88 541 aa10.33□□□□□ -0.76
SMARCAL1-202ENST00000358207 NIM1KQ8IY84 436 aa10.33□□□□□ -0.76
SMARCAL1-202ENST00000358207 MYCBPAPQ8TBZ2 947 aa10.33□□□□□ -0.76
SMARCAL1-202ENST00000358207 FAM167BQ9BTA0 163 aa10.33□□□□□ -0.76
SMARCAL1-202ENST00000358207 IQCGQ9H095 443 aaKnown RBP10.33□□□□□ -0.76
SMARCAL1-202ENST00000358207 PDE8BO95263 885 aa10.32□□□□□ -0.76
SMARCAL1-202ENST00000358207 HSPA1AP0DMV8 641 aaKnown RBP10.32□□□□□ -0.76
SMARCAL1-202ENST00000358207 HSPA1BP0DMV9 641 aaKnown RBP10.32□□□□□ -0.76
SMARCAL1-202ENST00000358207 PDCP20941 246 aa10.32□□□□□ -0.76
SMARCAL1-202ENST00000358207 CHRNDQ07001 517 aa10.32□□□□□ -0.76
SMARCAL1-202ENST00000358207 RNPC3Q96LT9 517 aaKnown RBP10.32□□□□□ -0.76
SMARCAL1-202ENST00000358207 HINFPQ9BQA5 517 aa10.32□□□□□ -0.76
SMARCAL1-202ENST00000358207 ZNF277Q9NRM2 450 aaPredicted RBP10.32□□□□□ -0.76
SMARCAL1-202ENST00000358207 ZFATQ9P243 1243 aa10.32□□□□□ -0.76
SMARCAL1-202ENST00000358207 RBM8AQ9Y5S9 174 aaKnown RBP10.32□□□□□ -0.76
SMARCAL1-202ENST00000358207 SPDYE5A6NIY4 337 aa10.32□□□□□ -0.76
SMARCAL1-202ENST00000358207 SOWAHDA6NJG2 315 aa10.32□□□□□ -0.76
SMARCAL1-202ENST00000358207 EIF4BP23588 611 aaKnown RBP10.32□□□□□ -0.76
SMARCAL1-202ENST00000358207 SCTRP47872 440 aa10.32□□□□□ -0.76
SMARCAL1-202ENST00000358207 TUBP50607 506 aa10.32□□□□□ -0.76
SMARCAL1-202ENST00000358207 IFFO1Q0D2I5 559 aa10.32□□□□□ -0.76
SMARCAL1-202ENST00000358207 CCDC102BQ68D86 513 aa10.32□□□□□ -0.76
SMARCAL1-202ENST00000358207 CCDC73Q6ZRK6 1079 aa10.32□□□□□ -0.76
SMARCAL1-202ENST00000358207 CCDC121Q6ZUS5 278 aa10.32□□□□□ -0.76
SMARCAL1-202ENST00000358207 NLRP14Q86W24 1093 aa10.32□□□□□ -0.76
SMARCAL1-202ENST00000358207 PDILTQ8N807 584 aa10.32□□□□□ -0.76
SMARCAL1-202ENST00000358207 JDP2Q8WYK2 163 aa10.32□□□□□ -0.76
SMARCAL1-202ENST00000358207 RRP36Q96EU6 259 aaKnown RBP10.32□□□□□ -0.76
SMARCAL1-202ENST00000358207 ZSWIM6Q9HCJ5 1215 aa10.32□□□□□ -0.76
SMARCAL1-202ENST00000358207 KIAA1468Q9P260 1216 aa10.32□□□□□ -0.76
SMARCAL1-202ENST00000358207 ZNF510Q9Y2H8 683 aa10.32□□□□□ -0.76
SMARCAL1-202ENST00000358207 LIN7AO14910 233 aaPredicted RBP10.32□□□□□ -0.76
SMARCAL1-202ENST00000358207 SERPINC1P01008 464 aa10.32□□□□□ -0.76
SMARCAL1-202ENST00000358207 CUL3Q13618 768 aa10.32□□□□□ -0.76
SMARCAL1-202ENST00000358207 WHAMMP3Q1A5X7 153 aa10.32□□□□□ -0.76
SMARCAL1-202ENST00000358207 FSIP1Q8NA03 581 aa10.32□□□□□ -0.76
SMARCAL1-202ENST00000358207 GGA2Q9UJY4 613 aa10.32□□□□□ -0.76
SMARCAL1-202ENST00000358207 RCOR1Q9UKL0 485 aa10.32□□□□□ -0.76
SMARCAL1-202ENST00000358207 MYH13Q9UKX3 1938 aa10.32□□□□□ -0.76
SMARCAL1-202ENST00000358207 IRS2Q9Y4H2 1338 aa10.31□□□□□ -0.76
SMARCAL1-202ENST00000358207 CTAGE9A4FU28 777 aa10.31□□□□□ -0.76
SMARCAL1-202ENST00000358207 UNCXA6NJT0 531 aa10.31□□□□□ -0.76
SMARCAL1-202ENST00000358207 DIAPH2O60879 1101 aa10.31□□□□□ -0.76
SMARCAL1-202ENST00000358207 RGS19P49795 217 aa10.31□□□□□ -0.76
SMARCAL1-202ENST00000358207 FKBP1AP62942 108 aaKnown RBP10.31□□□□□ -0.76
SMARCAL1-202ENST00000358207 STK3Q13188 491 aa10.31□□□□□ -0.76
SMARCAL1-202ENST00000358207 PTGISQ16647 500 aa10.31□□□□□ -0.76
SMARCAL1-202ENST00000358207 RAD9BQ6WBX8 426 aa10.31□□□□□ -0.76
SMARCAL1-202ENST00000358207 RAB11FIP4Q86YS3 637 aa10.31□□□□□ -0.76
SMARCAL1-202ENST00000358207 CCDC148Q8NFR7 591 aa10.31□□□□□ -0.76
SMARCAL1-202ENST00000358207 HAUS7Q99871 368 aa10.31□□□□□ -0.76
SMARCAL1-202ENST00000358207 CFHR5Q9BXR6 569 aa10.31□□□□□ -0.76
SMARCAL1-202ENST00000358207 ADGRG1Q9Y653 693 aa10.31□□□□□ -0.76
SMARCAL1-202ENST00000358207 GOLGA8KD6RF30 607 aa10.31□□□□□ -0.76
SMARCAL1-202ENST00000358207 AMPD2Q01433 879 aa10.31□□□□□ -0.76
SMARCAL1-202ENST00000358207 APBA1Q02410 837 aa10.31□□□□□ -0.76
SMARCAL1-202ENST00000358207 MKRN4PQ13434 485 aaPredicted RBP10.31□□□□□ -0.76
SMARCAL1-202ENST00000358207 KCTD16Q68DU8 428 aa10.31□□□□□ -0.76
SMARCAL1-202ENST00000358207 GALNT17Q6IS24 598 aa10.31□□□□□ -0.76
SMARCAL1-202ENST00000358207 FMR1NBQ8N0W7 255 aaPredicted RBP10.31□□□□□ -0.76
SMARCAL1-202ENST00000358207 KCNN1Q92952 543 aa10.31□□□□□ -0.76
SMARCAL1-202ENST00000358207 SDF4Q9BRK5 362 aa10.31□□□□□ -0.76
SMARCAL1-202ENST00000358207 SENP2Q9HC62 589 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms