RNA–Protein interactions for RNA: ENST00000357568.7

CAPN3-205, Transcript of calpain 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAPN3, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-205ENST00000357568 LACRTQ9GZZ8 138 aa11.83□□□□□ -0.52
CAPN3-205ENST00000357568 SH2D4AQ9H788 454 aa11.83□□□□□ -0.52
CAPN3-205ENST00000357568 JADE2Q9NQC1 790 aa11.83□□□□□ -0.52
CAPN3-205ENST00000357568 GDF3Q9NR23 364 aa11.83□□□□□ -0.52
CAPN3-205ENST00000357568 PSMA7O14818 248 aa11.83□□□□□ -0.52
CAPN3-205ENST00000357568 PCP11498 1178 aaKnown RBP11.83□□□□□ -0.52
CAPN3-205ENST00000357568 PRCPP42785 496 aa11.83□□□□□ -0.52
CAPN3-205ENST00000357568 MAP3K12Q12852 859 aa11.83□□□□□ -0.52
CAPN3-205ENST00000357568 PAK2Q13177 524 aa11.83□□□□□ -0.52
CAPN3-205ENST00000357568 SEC23AQ15436 765 aa11.83□□□□□ -0.52
CAPN3-205ENST00000357568 CCDC152Q4G0S7 254 aa11.83□□□□□ -0.52
CAPN3-205ENST00000357568 WLSQ5T9L3 541 aa11.83□□□□□ -0.52
CAPN3-205ENST00000357568 STYK1Q6J9G0 422 aa11.83□□□□□ -0.52
CAPN3-205ENST00000357568 PI16Q6UXB8 463 aa11.83□□□□□ -0.52
CAPN3-205ENST00000357568 ARFGAP2Q8N6H7 521 aa11.83□□□□□ -0.52
CAPN3-205ENST00000357568 GPATCH11Q8N954 259 aa11.83□□□□□ -0.52
CAPN3-205ENST00000357568 MTRQ99707 1265 aa11.83□□□□□ -0.52
CAPN3-205ENST00000357568 BICDL2A1A5D9 508 aa11.82□□□□□ -0.52
CAPN3-205ENST00000357568 GSG1L2A8MUP6 293 aa11.82□□□□□ -0.52
CAPN3-205ENST00000357568 IDH1O75874 414 aaKnown RBP11.82□□□□□ -0.52
CAPN3-205ENST00000357568 RHOBTB3O94955 611 aa11.82□□□□□ -0.52
CAPN3-205ENST00000357568 HOXA10P31260 410 aaPredicted RBP11.82□□□□□ -0.52
CAPN3-205ENST00000357568 LSP1P33241 339 aa11.82□□□□□ -0.52
CAPN3-205ENST00000357568 PAFAH1B1P43034 410 aa11.82□□□□□ -0.52
CAPN3-205ENST00000357568 HAUS3Q68CZ6 603 aa11.82□□□□□ -0.52
CAPN3-205ENST00000357568 SYNE4Q8N205 404 aa11.82□□□□□ -0.52
CAPN3-205ENST00000357568 CUEDC2Q9H467 287 aa11.82□□□□□ -0.52
CAPN3-205ENST00000357568 ABCB11O95342 1321 aa11.82□□□□□ -0.52
CAPN3-205ENST00000357568 BRCA1P38398 1863 aaKnown RBP11.82□□□□□ -0.52
CAPN3-205ENST00000357568 H0YHG0 523 aa11.82□□□□□ -0.52
CAPN3-205ENST00000357568 H0YIN7 160 aa11.82□□□□□ -0.52
CAPN3-205ENST00000357568 PPP1R37O75864 691 aa11.82□□□□□ -0.52
CAPN3-205ENST00000357568 RASSF9O75901 435 aa11.82□□□□□ -0.52
CAPN3-205ENST00000357568 NPR1P16066 1061 aa11.82□□□□□ -0.52
CAPN3-205ENST00000357568 CASP1P29466 404 aa11.82□□□□□ -0.52
CAPN3-205ENST00000357568 RDXP35241 583 aaKnown RBP11.82□□□□□ -0.52
CAPN3-205ENST00000357568 MKRN4PQ13434 485 aaPredicted RBP11.82□□□□□ -0.52
CAPN3-205ENST00000357568 PTGISQ16647 500 aa11.82□□□□□ -0.52
CAPN3-205ENST00000357568 NAA35Q5VZE5 725 aa11.82□□□□□ -0.52
CAPN3-205ENST00000357568 TTI2Q6NXR4 508 aa11.82□□□□□ -0.52
CAPN3-205ENST00000357568 LRIG3Q6UXM1 1119 aa11.82□□□□□ -0.52
CAPN3-205ENST00000357568 GSPT2Q8IYD1 628 aaKnown RBP11.82□□□□□ -0.52
CAPN3-205ENST00000357568 RNF10Q8N5U6 811 aaKnown RBP11.82□□□□□ -0.52
CAPN3-205ENST00000357568 BANK1Q8NDB2 785 aa11.82□□□□□ -0.52
CAPN3-205ENST00000357568 TTLL11Q8NHH1 800 aa11.82□□□□□ -0.52
CAPN3-205ENST00000357568 WHAMMQ8TF30 809 aa11.82□□□□□ -0.52
CAPN3-205ENST00000357568 MASTLQ96GX5 879 aa11.82□□□□□ -0.52
CAPN3-205ENST00000357568 RBM17Q96I25 401 aaKnown RBP11.82□□□□□ -0.52
CAPN3-205ENST00000357568 OSBPL9Q96SU4 736 aa11.82□□□□□ -0.52
CAPN3-205ENST00000357568 LRRC1Q9BTT6 524 aa11.82□□□□□ -0.52
CAPN3-205ENST00000357568 PPP1R1BQ9UD71 204 aaPredicted RBP11.82□□□□□ -0.52
CAPN3-205ENST00000357568 MCM8Q9UJA3 840 aa11.82□□□□□ -0.52
CAPN3-205ENST00000357568 TACC3Q9Y6A5 838 aa11.82□□□□□ -0.52
CAPN3-205ENST00000357568 GRID2IPA4D2P6 1211 aa11.81□□□□□ -0.52
CAPN3-205ENST00000357568 RCCD1A6NED2 376 aa11.81□□□□□ -0.52
CAPN3-205ENST00000357568 DDAH1O94760 285 aa11.81□□□□□ -0.52
CAPN3-205ENST00000357568 FAM107AO95990 144 aa11.81□□□□□ -0.52
CAPN3-205ENST00000357568 PTGDRQ13258 359 aa11.81□□□□□ -0.52
CAPN3-205ENST00000357568 C6orf89Q6UWU4 347 aa11.81□□□□□ -0.52
CAPN3-205ENST00000357568 ARMC9Q7Z3E5 817 aa11.81□□□□□ -0.52
CAPN3-205ENST00000357568 C2CD5Q86YS7 1000 aa11.81□□□□□ -0.52
CAPN3-205ENST00000357568 GIMAP8Q8ND71 665 aaPredicted RBP11.81□□□□□ -0.52
CAPN3-205ENST00000357568 ARL8AQ96BM9 186 aa11.81□□□□□ -0.52
CAPN3-205ENST00000357568 SHISA4Q96DD7 197 aa11.81□□□□□ -0.52
CAPN3-205ENST00000357568 CRAMP1Q96RY5 1269 aa11.81□□□□□ -0.52
CAPN3-205ENST00000357568 UBAC1Q9BSL1 405 aa11.81□□□□□ -0.52
CAPN3-205ENST00000357568 EDEM3Q9BZQ6 932 aa11.81□□□□□ -0.52
CAPN3-205ENST00000357568 VPS54Q9P1Q0 977 aa11.81□□□□□ -0.52
CAPN3-205ENST00000357568 DMGDHQ9UI17 866 aaKnown RBP11.81□□□□□ -0.52
CAPN3-205ENST00000357568 ZNF185O15231 689 aa11.81□□□□□ -0.52
CAPN3-205ENST00000357568 ZMYND10O75800 440 aa11.81□□□□□ -0.52
CAPN3-205ENST00000357568 MBD4O95243 580 aa11.81□□□□□ -0.52
CAPN3-205ENST00000357568 NPY5RQ15761 445 aa11.81□□□□□ -0.52
CAPN3-205ENST00000357568 CFAP58Q5T655 872 aa11.81□□□□□ -0.52
CAPN3-205ENST00000357568 TSEN2Q8NCE0 465 aaKnown RBP11.81□□□□□ -0.52
CAPN3-205ENST00000357568 ZNF473Q8WTR7 871 aaKnown RBP11.81□□□□□ -0.52
CAPN3-205ENST00000357568 RRP36Q96EU6 259 aaKnown RBP11.81□□□□□ -0.52
CAPN3-205ENST00000357568 ZIM3Q96PE6 472 aa11.81□□□□□ -0.52
CAPN3-205ENST00000357568 PLAGL2Q9UPG8 496 aa11.81□□□□□ -0.52
CAPN3-205ENST00000357568 GOLGA6L7A0A1B0GV03 622 aa11.8□□□□□ -0.52
CAPN3-205ENST00000357568 PDE8BO95263 885 aa11.8□□□□□ -0.52
CAPN3-205ENST00000357568 TRIM21P19474 475 aaKnown RBP11.8□□□□□ -0.52
CAPN3-205ENST00000357568 C8orf74Q6P047 294 aa11.8□□□□□ -0.52
CAPN3-205ENST00000357568 ESR2Q92731 530 aa11.8□□□□□ -0.52
CAPN3-205ENST00000357568 RPGRQ92834 1020 aaKnown RBP11.8□□□□□ -0.52
CAPN3-205ENST00000357568 BLZF1Q9H2G9 400 aa11.8□□□□□ -0.52
CAPN3-205ENST00000357568 ANKRD18BA2A2Z9 1011 aa11.8□□□□□ -0.52
CAPN3-205ENST00000357568 RASSF10A6NK89 507 aa11.8□□□□□ -0.52
CAPN3-205ENST00000357568 FGFR2P21802 821 aa11.8□□□□□ -0.52
CAPN3-205ENST00000357568 ALDH1B1P30837 517 aa11.8□□□□□ -0.52
CAPN3-205ENST00000357568 MDH1P40925 334 aaKnown RBP11.8□□□□□ -0.52
CAPN3-205ENST00000357568 MRPL12P52815 198 aaKnown RBP11.8□□□□□ -0.52
CAPN3-205ENST00000357568 IFFO1Q0D2I5 559 aa11.8□□□□□ -0.52
CAPN3-205ENST00000357568 PDCLQ13371 301 aa11.8□□□□□ -0.52
CAPN3-205ENST00000357568 CCDC181Q5TID7 509 aa11.8□□□□□ -0.52
CAPN3-205ENST00000357568 TMC4Q7Z404 712 aa11.8□□□□□ -0.52
CAPN3-205ENST00000357568 GIMAP7Q8NHV1 300 aa11.8□□□□□ -0.52
CAPN3-205ENST00000357568 LPIN2Q92539 896 aa11.8□□□□□ -0.52
CAPN3-205ENST00000357568 CNKSR1Q969H4 720 aa11.8□□□□□ -0.52
CAPN3-205ENST00000357568 ZKSCAN4Q969J2 545 aaPredicted RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms