RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 KCTD17Q8N5Z5 321 aa18.72■□□□□ 0.59
COL27A1-201ENST00000356083 NFE2L3Q9Y4A8 694 aa18.72■□□□□ 0.59
COL27A1-201ENST00000356083 IMPG1Q17R60 797 aa18.72■□□□□ 0.59
COL27A1-201ENST00000356083 CROCCP2Q86T23 111 aa18.72■□□□□ 0.59
COL27A1-201ENST00000356083 LINS1Q8NG48 757 aa18.72■□□□□ 0.59
COL27A1-201ENST00000356083 PHACTR3Q96KR7 559 aa18.72■□□□□ 0.59
COL27A1-201ENST00000356083 FAM227BQ96M60 508 aa18.72■□□□□ 0.59
COL27A1-201ENST00000356083 AFF4Q9UHB7 1163 aaKnown RBP18.72■□□□□ 0.59
COL27A1-201ENST00000356083 TTLL7Q6ZT98 887 aa18.72■□□□□ 0.59
COL27A1-201ENST00000356083 NUDCD1Q96RS6 583 aa18.72■□□□□ 0.59
COL27A1-201ENST00000356083 ANKRD12Q6UB98 2062 aa18.72■□□□□ 0.59
COL27A1-201ENST00000356083 ALDH1L1O75891 902 aa18.72■□□□□ 0.59
COL27A1-201ENST00000356083 DDAH1O94760 285 aa18.72■□□□□ 0.59
COL27A1-201ENST00000356083 LRRC23Q53EV4 343 aaPredicted RBP18.72■□□□□ 0.59
COL27A1-201ENST00000356083 PLA2G4DQ86XP0 818 aa18.72■□□□□ 0.59
COL27A1-201ENST00000356083 SPATA5Q8NB90 893 aa18.72■□□□□ 0.59
COL27A1-201ENST00000356083 SLC39A2Q9NP94 309 aa18.72■□□□□ 0.59
COL27A1-201ENST00000356083 BRD1O95696 1058 aa18.72■□□□□ 0.59
COL27A1-201ENST00000356083 C17orf53Q8N3J3 647 aaPredicted RBP18.72■□□□□ 0.59
COL27A1-201ENST00000356083 SLC27A2O14975 620 aa18.71■□□□□ 0.59
COL27A1-201ENST00000356083 SMC5Q8IY18 1101 aa18.71■□□□□ 0.59
COL27A1-201ENST00000356083 TEKT3Q9BXF9 490 aa18.71■□□□□ 0.59
COL27A1-201ENST00000356083 KCNG1Q9UIX4 513 aa18.71■□□□□ 0.59
COL27A1-201ENST00000356083 DRP2Q13474 957 aa18.71■□□□□ 0.59
COL27A1-201ENST00000356083 CYP4F22Q6NT55 531 aa18.71■□□□□ 0.59
COL27A1-201ENST00000356083 SCARA5Q6ZMJ2 495 aa18.71■□□□□ 0.59
COL27A1-201ENST00000356083 ZKSCAN5Q9Y2L8 839 aa18.71■□□□□ 0.59
COL27A1-201ENST00000356083 CREB3O43889 395 aa18.71■□□□□ 0.59
COL27A1-201ENST00000356083 MIS12Q9H081 205 aa18.71■□□□□ 0.59
COL27A1-201ENST00000356083 SLC4A7Q9Y6M7 1214 aa18.71■□□□□ 0.59
COL27A1-201ENST00000356083 DPYSL4O14531 572 aa18.71■□□□□ 0.59
COL27A1-201ENST00000356083 CUTAO60888 179 aa18.71■□□□□ 0.59
COL27A1-201ENST00000356083 KCTD2Q14681 263 aa18.71■□□□□ 0.59
COL27A1-201ENST00000356083 HSPH1Q92598 858 aa18.71■□□□□ 0.59
COL27A1-201ENST00000356083 NT5C3AQ9H0P0 336 aa18.71■□□□□ 0.59
COL27A1-201ENST00000356083 TJAP1Q5JTD0 557 aa18.71■□□□□ 0.59
COL27A1-201ENST00000356083 RASEFQ8IZ41 740 aa18.71■□□□□ 0.59
COL27A1-201ENST00000356083 MYOCDQ8IZQ8 938 aa18.71■□□□□ 0.59
COL27A1-201ENST00000356083 ESRRGP62508 458 aa18.71■□□□□ 0.59
COL27A1-201ENST00000356083 ZKSCAN8Q15776 578 aaPredicted RBP18.71■□□□□ 0.59
COL27A1-201ENST00000356083 DARS2Q6PI48 645 aaKnown RBP18.71■□□□□ 0.59
COL27A1-201ENST00000356083 SMAP1Q8IYB5 467 aaPredicted RBP18.71■□□□□ 0.59
COL27A1-201ENST00000356083 GSDMAQ96QA5 445 aa18.71■□□□□ 0.59
COL27A1-201ENST00000356083 CC2D2AQ9P2K1 1620 aa18.71■□□□□ 0.59
COL27A1-201ENST00000356083 ANP32DO95626 131 aa18.7■□□□□ 0.58
COL27A1-201ENST00000356083 ANKRD20A4Q4UJ75 823 aa18.7■□□□□ 0.58
COL27A1-201ENST00000356083 ANKRD20A8PQ5CZ79 823 aa18.7■□□□□ 0.58
COL27A1-201ENST00000356083 ANKRD20A2Q5SQ80 823 aa18.7■□□□□ 0.58
COL27A1-201ENST00000356083 ANKRD20A1Q5TYW2 823 aa18.7■□□□□ 0.58
COL27A1-201ENST00000356083 DACH2Q96NX9 599 aa18.7■□□□□ 0.58
COL27A1-201ENST00000356083 EIF2AQ9BY44 585 aaKnown RBP18.7■□□□□ 0.58
COL27A1-201ENST00000356083 NRBP2Q9NSY0 501 aa18.7■□□□□ 0.58
COL27A1-201ENST00000356083 TTC41PQ6P2S7 1318 aa18.7■□□□□ 0.58
COL27A1-201ENST00000356083 KIF14Q15058 1648 aa18.7■□□□□ 0.58
COL27A1-201ENST00000356083 HADHAP40939 763 aa18.7■□□□□ 0.58
COL27A1-201ENST00000356083 CAPN11Q9UMQ6 739 aa18.7■□□□□ 0.58
COL27A1-201ENST00000356083 BASP1P80723 227 aaKnown RBP18.7■□□□□ 0.58
COL27A1-201ENST00000356083 KCTD1Q719H9 257 aa18.7■□□□□ 0.58
COL27A1-201ENST00000356083 B4GALNT2Q8NHY0 566 aa18.7■□□□□ 0.58
COL27A1-201ENST00000356083 KAT6AQ92794 2004 aa18.7■□□□□ 0.58
COL27A1-201ENST00000356083 SYCE1LA8MT33 242 aa18.7■□□□□ 0.58
COL27A1-201ENST00000356083 IFNA8P32881 189 aa18.7■□□□□ 0.58
COL27A1-201ENST00000356083 LZTS2Q9BRK4 669 aa18.7■□□□□ 0.58
COL27A1-201ENST00000356083 HOMER3Q9NSC5 361 aa18.7■□□□□ 0.58
COL27A1-201ENST00000356083 SAR1BQ9Y6B6 198 aa18.7■□□□□ 0.58
COL27A1-201ENST00000356083 GOLGA8QA0A0J9YX86 632 aa18.7■□□□□ 0.58
COL27A1-201ENST00000356083 GOLGA8OA6NCC3 632 aa18.7■□□□□ 0.58
COL27A1-201ENST00000356083 GOLGA8NF8WBI6 632 aa18.7■□□□□ 0.58
COL27A1-201ENST00000356083 MCF2LO15068 1137 aa18.7■□□□□ 0.58
COL27A1-201ENST00000356083 PTK2Q05397 1052 aa18.7■□□□□ 0.58
COL27A1-201ENST00000356083 MTHFSDQ2M296 383 aaKnown RBP18.7■□□□□ 0.58
COL27A1-201ENST00000356083 DSTYKQ6XUX3 929 aa18.7■□□□□ 0.58
COL27A1-201ENST00000356083 AFG1LQ8WV93 481 aa18.7■□□□□ 0.58
COL27A1-201ENST00000356083 ARMCX3Q9UH62 379 aaPredicted RBP18.7■□□□□ 0.58
COL27A1-201ENST00000356083 F5H423 210 aaPredicted RBP18.7■□□□□ 0.58
COL27A1-201ENST00000356083 MYL3P08590 195 aa18.69■□□□□ 0.58
COL27A1-201ENST00000356083 ANKRD44Q8N8A2 993 aa18.69■□□□□ 0.58
COL27A1-201ENST00000356083 APPBP2Q92624 585 aa18.69■□□□□ 0.58
COL27A1-201ENST00000356083 PCIF1Q9H4Z3 704 aa18.69■□□□□ 0.58
COL27A1-201ENST00000356083 IBTKQ9P2D0 1353 aaPredicted RBP18.69■□□□□ 0.58
COL27A1-201ENST00000356083 CD58P19256 250 aa18.69■□□□□ 0.58
COL27A1-201ENST00000356083 N4BP1O75113 896 aaKnown RBP18.69■□□□□ 0.58
COL27A1-201ENST00000356083 SERPIND1P05546 499 aa18.69■□□□□ 0.58
COL27A1-201ENST00000356083 CCDC84Q86UT8 332 aaPredicted RBP18.69■□□□□ 0.58
COL27A1-201ENST00000356083 GPKOWQ92917 476 aaPredicted RBP eCLIP18.69■□□□□ 0.58
COL27A1-201ENST00000356083 NRBF2Q96F24 287 aa18.69■□□□□ 0.58
COL27A1-201ENST00000356083 KIF17Q9P2E2 1029 aa18.69■□□□□ 0.58
COL27A1-201ENST00000356083 PRPF4O43172 522 aaKnown RBP eCLIP18.69■□□□□ 0.582e-7■■■□□ 14.7
COL27A1-201ENST00000356083 MCF2L2Q86YR7 1114 aa18.69■□□□□ 0.58
COL27A1-201ENST00000356083 SCN4BQ8IWT1 228 aa18.69■□□□□ 0.58
COL27A1-201ENST00000356083 EIF4G3O43432 1585 aaKnown RBP18.69■□□□□ 0.58
COL27A1-201ENST00000356083 PMS1P54277 932 aaKnown RBP18.69■□□□□ 0.58
COL27A1-201ENST00000356083 TMTC1Q8IUR5 882 aa18.69■□□□□ 0.58
COL27A1-201ENST00000356083 EPAS1Q99814 870 aa18.69■□□□□ 0.58
COL27A1-201ENST00000356083 DRC3Q9H069 523 aa18.69■□□□□ 0.58
COL27A1-201ENST00000356083 PCDHA1Q9Y5I3 950 aa18.69■□□□□ 0.58
COL27A1-201ENST00000356083 E2F6O75461 281 aa18.69■□□□□ 0.58
COL27A1-201ENST00000356083 OAS2P29728 719 aaKnown RBP18.69■□□□□ 0.58
COL27A1-201ENST00000356083 NSFP46459 744 aaKnown RBP18.69■□□□□ 0.58
COL27A1-201ENST00000356083 ARHGEF18Q6ZSZ5 1173 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms