RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 ASAP2O43150 1006 aa17.33■□□□□ 0.36
RTN3-205ENST00000356000 TCP1P17987 556 aaKnown RBP17.33■□□□□ 0.36
RTN3-205ENST00000356000 NCALDP61601 193 aa17.33■□□□□ 0.36
RTN3-205ENST00000356000 EIF4A2Q14240 407 aaKnown RBP17.33■□□□□ 0.36
RTN3-205ENST00000356000 AGBL2Q5U5Z8 902 aa17.33■□□□□ 0.36
RTN3-205ENST00000356000 PIGWQ7Z7B1 504 aa17.33■□□□□ 0.36
RTN3-205ENST00000356000 LCA5Q86VQ0 697 aa17.33■□□□□ 0.36
RTN3-205ENST00000356000 EPB41L5Q9HCM4 733 aa17.33■□□□□ 0.36
RTN3-205ENST00000356000 SEC31BQ9NQW1 1179 aa17.33■□□□□ 0.36
RTN3-205ENST00000356000 GALNT8Q9NY28 637 aa17.33■□□□□ 0.36
RTN3-205ENST00000356000 NFS1Q9Y697 457 aa17.33■□□□□ 0.36
RTN3-205ENST00000356000 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.33■□□□□ 0.36
RTN3-205ENST00000356000 SLIT3O75094 1523 aa17.33■□□□□ 0.36
RTN3-205ENST00000356000 ZNF609O15014 1411 aa17.33■□□□□ 0.36
RTN3-205ENST00000356000 ATP6V1C1P21283 382 aa17.33■□□□□ 0.36
RTN3-205ENST00000356000 KLHL10Q6JEL2 608 aa17.33■□□□□ 0.36
RTN3-205ENST00000356000 LMOD2Q6P5Q4 547 aa17.33■□□□□ 0.36
RTN3-205ENST00000356000 WDR59Q6PJI9 974 aa17.33■□□□□ 0.36
RTN3-205ENST00000356000 TRPM8Q7Z2W7 1104 aa17.33■□□□□ 0.36
RTN3-205ENST00000356000 DMAP1Q9NPF5 467 aaPredicted RBP17.33■□□□□ 0.36
RTN3-205ENST00000356000 TLR7Q9NYK1 1049 aaKnown RBP17.33■□□□□ 0.36
RTN3-205ENST00000356000 FAM133BQ5BKY9 247 aaKnown RBP17.32■□□□□ 0.36
RTN3-205ENST00000356000 KANK3Q6NY19 840 aa17.32■□□□□ 0.36
RTN3-205ENST00000356000 RUFY4Q6ZNE9 571 aa17.32■□□□□ 0.36
RTN3-205ENST00000356000 RINLQ6ZS11 566 aa17.32■□□□□ 0.36
RTN3-205ENST00000356000 GRAMD1CQ8IYS0 662 aa17.32■□□□□ 0.36
RTN3-205ENST00000356000 CCDC155Q8N6L0 562 aa17.32■□□□□ 0.36
RTN3-205ENST00000356000 KRI1Q8N9T8 703 aaKnown RBP17.32■□□□□ 0.36
RTN3-205ENST00000356000 CENPTQ96BT3 561 aa17.32■□□□□ 0.36
RTN3-205ENST00000356000 TRIM7Q9C029 511 aa17.32■□□□□ 0.36
RTN3-205ENST00000356000 RANBP17Q9H2T7 1088 aaKnown RBP17.32■□□□□ 0.36
RTN3-205ENST00000356000 OCEL1Q9H607 264 aa17.32■□□□□ 0.36
RTN3-205ENST00000356000 RBM12Q9NTZ6 932 aaKnown RBP17.32■□□□□ 0.36
RTN3-205ENST00000356000 WFS1O76024 890 aa17.32■□□□□ 0.36
RTN3-205ENST00000356000 GNAZP19086 355 aa17.32■□□□□ 0.36
RTN3-205ENST00000356000 STAT6P42226 847 aa17.32■□□□□ 0.36
RTN3-205ENST00000356000 COPB1P53618 953 aaKnown RBP17.32■□□□□ 0.36
RTN3-205ENST00000356000 TMEM62Q0P6H9 643 aa17.32■□□□□ 0.36
RTN3-205ENST00000356000 BEND3Q5T5X7 828 aa17.32■□□□□ 0.36
RTN3-205ENST00000356000 RNF220Q5VTB9 566 aa17.32■□□□□ 0.36
RTN3-205ENST00000356000 TMEM154Q6P9G4 183 aa17.32■□□□□ 0.36
RTN3-205ENST00000356000 MAEAQ7L5Y9 396 aa17.32■□□□□ 0.36
RTN3-205ENST00000356000 NME9Q86XW9 330 aa17.32■□□□□ 0.36
RTN3-205ENST00000356000 IFT81Q8WYA0 676 aa17.32■□□□□ 0.36
RTN3-205ENST00000356000 PREBQ9HCU5 417 aa17.32■□□□□ 0.36
RTN3-205ENST00000356000 HYOU1Q9Y4L1 999 aa17.32■□□□□ 0.36
RTN3-205ENST00000356000 DUSP10Q9Y6W6 482 aa17.32■□□□□ 0.36
RTN3-205ENST00000356000 MYH7P12883 1935 aa17.31■□□□□ 0.36
RTN3-205ENST00000356000 BCL9O00512 1426 aa17.31■□□□□ 0.36
RTN3-205ENST00000356000 A8MUI8 341 aa17.31■□□□□ 0.36
RTN3-205ENST00000356000 POLR2DO15514 142 aaKnown RBP17.31■□□□□ 0.36
RTN3-205ENST00000356000 HEXIM1O94992 359 aaKnown RBP17.31■□□□□ 0.36
RTN3-205ENST00000356000 RARAP10276 462 aa17.31■□□□□ 0.36
RTN3-205ENST00000356000 PAFAH1B1P43034 410 aa17.31■□□□□ 0.36
RTN3-205ENST00000356000 ENOX2Q16206 610 aaKnown RBP17.31■□□□□ 0.36
RTN3-205ENST00000356000 WASHC4Q2M389 1173 aa17.31■□□□□ 0.36
RTN3-205ENST00000356000 MCMDC2Q4G0Z9 681 aa17.31■□□□□ 0.36
RTN3-205ENST00000356000 ERMARDQ5T6L9 678 aa17.31■□□□□ 0.36
RTN3-205ENST00000356000 OR52E8Q6IFG1 317 aa17.31■□□□□ 0.36
RTN3-205ENST00000356000 VPS37DQ86XT2 251 aa17.31■□□□□ 0.36
RTN3-205ENST00000356000 FGD4Q96M96 766 aa17.31■□□□□ 0.36
RTN3-205ENST00000356000 ZNF317Q96PQ6 595 aaPredicted RBP17.31■□□□□ 0.36
RTN3-205ENST00000356000 RPS6KC1Q96S38 1066 aa17.31■□□□□ 0.36
RTN3-205ENST00000356000 NDNQ99608 321 aa17.31■□□□□ 0.36
RTN3-205ENST00000356000 PHAXQ9H814 394 aaKnown RBP17.31■□□□□ 0.36
RTN3-205ENST00000356000 TMCO1Q9UM00 188 aa17.31■□□□□ 0.36
RTN3-205ENST00000356000 TTC26A0AVF1 554 aa17.31■□□□□ 0.36
RTN3-205ENST00000356000 MACROD2A1Z1Q3 448 aa17.31■□□□□ 0.36
RTN3-205ENST00000356000 IGF2BP3O00425 579 aaKnown RBP eCLIP17.31■□□□□ 0.36
RTN3-205ENST00000356000 FLOT1O75955 427 aa17.31■□□□□ 0.36
RTN3-205ENST00000356000 CYLC1P35663 651 aaPredicted RBP17.31■□□□□ 0.36
RTN3-205ENST00000356000 ATP11AP98196 1134 aa17.31■□□□□ 0.36
RTN3-205ENST00000356000 GUCY2DQ02846 1103 aa17.31■□□□□ 0.36
RTN3-205ENST00000356000 PPARDQ03181 441 aa17.31■□□□□ 0.36
RTN3-205ENST00000356000 KLC1Q07866 573 aa17.31■□□□□ 0.36
RTN3-205ENST00000356000 SESTD1Q86VW0 696 aa17.31■□□□□ 0.36
RTN3-205ENST00000356000 KCNV2Q8TDN2 545 aa17.31■□□□□ 0.36
RTN3-205ENST00000356000 XPO6Q96QU8 1125 aaKnown RBP17.31■□□□□ 0.36
RTN3-205ENST00000356000 GMEB1Q9Y692 573 aa17.31■□□□□ 0.36
RTN3-205ENST00000356000 ABCC12Q96J65 1359 aa17.3■□□□□ 0.36
RTN3-205ENST00000356000 E7EWF7 191 aa17.3■□□□□ 0.36
RTN3-205ENST00000356000 PCK1P35558 622 aa17.3■□□□□ 0.36
RTN3-205ENST00000356000 ZNF131P52739 623 aa17.3■□□□□ 0.36
RTN3-205ENST00000356000 MPP3Q13368 585 aa17.3■□□□□ 0.36
RTN3-205ENST00000356000 Q4G0T1 1027 aa17.3■□□□□ 0.36
RTN3-205ENST00000356000 ODF2Q5BJF6 829 aa17.3■□□□□ 0.36
RTN3-205ENST00000356000 EDC3Q96F86 508 aaKnown RBP17.3■□□□□ 0.36
RTN3-205ENST00000356000 CDCA7Q9BWT1 371 aaPredicted RBP17.3■□□□□ 0.36
RTN3-205ENST00000356000 FAM129AQ9BZQ8 928 aa17.3■□□□□ 0.36
RTN3-205ENST00000356000 SMARCAL1Q9NZC9 954 aa17.3■□□□□ 0.36
RTN3-205ENST00000356000 EDC4Q6P2E9 1401 aaKnown RBP17.3■□□□□ 0.36
RTN3-205ENST00000356000 MYH13Q9UKX3 1938 aa17.3■□□□□ 0.36
RTN3-205ENST00000356000 ESYT3A0FGR9 886 aa17.3■□□□□ 0.36
RTN3-205ENST00000356000 E7ENQ6 273 aa17.3■□□□□ 0.36
RTN3-205ENST00000356000 BAG3O95817 575 aa17.3■□□□□ 0.36
RTN3-205ENST00000356000 DESP17661 470 aa17.3■□□□□ 0.36
RTN3-205ENST00000356000 RPL13P26373 211 aaKnown RBP17.3■□□□□ 0.36
RTN3-205ENST00000356000 MSH2P43246 934 aa17.3■□□□□ 0.36
RTN3-205ENST00000356000 ZNF844Q08AG5 666 aa17.3■□□□□ 0.36
RTN3-205ENST00000356000 MEA1Q16626 185 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 281 ms