RNA–Protein interactions for RNA: ENST00000355683.9

STRN3-201, Transcript of striatin 3, humanhuman

TSL 1 (best) BASIC

Gene STRN3, Length 3,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN3-201ENST00000355683 U2AF1L4Q8WU68 220 aaKnown RBP16.81■□□□□ 0.28
STRN3-201ENST00000355683 KIF1AQ12756 1690 aa16.81■□□□□ 0.28
STRN3-201ENST00000355683 TRIM66O15016 1216 aa16.81■□□□□ 0.28
STRN3-201ENST00000355683 CCT5P48643 541 aa16.81■□□□□ 0.28
STRN3-201ENST00000355683 CAPN12Q6ZSI9 719 aa16.81■□□□□ 0.28
STRN3-201ENST00000355683 NSUN4Q96CB9 384 aaKnown RBP16.81■□□□□ 0.28
STRN3-201ENST00000355683 KRT12Q99456 494 aa16.81■□□□□ 0.28
STRN3-201ENST00000355683 DDX25Q9UHL0 483 aaKnown RBP16.81■□□□□ 0.28
STRN3-201ENST00000355683 H7C1D1 291 aa16.8■□□□□ 0.28
STRN3-201ENST00000355683 GYPCP04921 128 aa16.8■□□□□ 0.28
STRN3-201ENST00000355683 CASP8Q14790 479 aa16.8■□□□□ 0.28
STRN3-201ENST00000355683 REXO1L1PQ8IX06 675 aa16.8■□□□□ 0.28
STRN3-201ENST00000355683 CCDC127Q96BQ5 260 aa16.8■□□□□ 0.28
STRN3-201ENST00000355683 BICD1Q96G01 975 aa16.8■□□□□ 0.28
STRN3-201ENST00000355683 CCDC114Q96M63 670 aa16.8■□□□□ 0.28
STRN3-201ENST00000355683 MAP3K14Q99558 947 aa16.8■□□□□ 0.28
STRN3-201ENST00000355683 ALDH8A1Q9H2A2 487 aaPredicted RBP16.8■□□□□ 0.28
STRN3-201ENST00000355683 PCIF1Q9H4Z3 704 aa16.8■□□□□ 0.28
STRN3-201ENST00000355683 TADA3O75528 432 aa16.8■□□□□ 0.28
STRN3-201ENST00000355683 ADAM9Q13443 819 aa16.8■□□□□ 0.28
STRN3-201ENST00000355683 SLF2Q8IX21 1173 aa16.8■□□□□ 0.28
STRN3-201ENST00000355683 MS4A14Q96JA4 679 aa16.8■□□□□ 0.28
STRN3-201ENST00000355683 PANK4Q9NVE7 773 aa16.8■□□□□ 0.28
STRN3-201ENST00000355683 DNAJC17Q9NVM6 304 aaKnown RBP16.8■□□□□ 0.28
STRN3-201ENST00000355683 PRPF6O94906 941 aaKnown RBP16.8■□□□□ 0.28
STRN3-201ENST00000355683 POLD1P28340 1107 aa16.8■□□□□ 0.28
STRN3-201ENST00000355683 GRIK5Q16478 980 aa16.8■□□□□ 0.28
STRN3-201ENST00000355683 ZNF658Q5TYW1 1059 aaPredicted RBP16.8■□□□□ 0.28
STRN3-201ENST00000355683 KRT25Q7Z3Z0 450 aa16.8■□□□□ 0.28
STRN3-201ENST00000355683 EHBP1Q8NDI1 1231 aa16.8■□□□□ 0.28
STRN3-201ENST00000355683 P2RX5Q93086 422 aa16.8■□□□□ 0.28
STRN3-201ENST00000355683 ATP8A2Q9NTI2 1148 aa16.8■□□□□ 0.28
STRN3-201ENST00000355683 ACTN4O43707 911 aaKnown RBP16.79■□□□□ 0.28
STRN3-201ENST00000355683 DNM2P50570 870 aa16.79■□□□□ 0.28
STRN3-201ENST00000355683 TUBB4AP04350 444 aa16.79■□□□□ 0.28
STRN3-201ENST00000355683 PMS1P54277 932 aaKnown RBP16.79■□□□□ 0.28
STRN3-201ENST00000355683 ANKRD40Q6AI12 368 aa16.79■□□□□ 0.28
STRN3-201ENST00000355683 CPLX4Q7Z7G2 160 aa16.79■□□□□ 0.28
STRN3-201ENST00000355683 DAAM2Q86T65 1068 aa16.79■□□□□ 0.28
STRN3-201ENST00000355683 MGARPQ8TDB4 240 aa16.79■□□□□ 0.28
STRN3-201ENST00000355683 RABGGTAQ92696 567 aa16.79■□□□□ 0.28
STRN3-201ENST00000355683 CCDC169A6NNP5 214 aa16.79■□□□□ 0.28
STRN3-201ENST00000355683 CETN3O15182 167 aa16.79■□□□□ 0.28
STRN3-201ENST00000355683 GBP2P32456 591 aaPredicted RBP16.79■□□□□ 0.28
STRN3-201ENST00000355683 FAM26FQ5R3K3 315 aa16.79■□□□□ 0.28
STRN3-201ENST00000355683 NSMFQ6X4W1 530 aa16.79■□□□□ 0.28
STRN3-201ENST00000355683 CCDC50Q8IVM0 306 aa16.79■□□□□ 0.28
STRN3-201ENST00000355683 CCDC65Q8IXS2 484 aa16.79■□□□□ 0.28
STRN3-201ENST00000355683 LARP4BQ92615 738 aaKnown RBP16.79■□□□□ 0.28
STRN3-201ENST00000355683 TUBE1Q9UJT0 475 aa16.79■□□□□ 0.28
STRN3-201ENST00000355683 FAM205AQ6ZU69 1335 aa16.79■□□□□ 0.28
STRN3-201ENST00000355683 USP17L10C9JJH3 530 aa16.79■□□□□ 0.28
STRN3-201ENST00000355683 RNF40O75150 1001 aa16.79■□□□□ 0.28
STRN3-201ENST00000355683 SLC9C1Q4G0N8 1177 aa16.79■□□□□ 0.28
STRN3-201ENST00000355683 MYOCDQ8IZQ8 938 aa16.79■□□□□ 0.28
STRN3-201ENST00000355683 MMS19Q96T76 1030 aa16.79■□□□□ 0.28
STRN3-201ENST00000355683 BSDC1Q9NW68 430 aaPredicted RBP16.79■□□□□ 0.28
STRN3-201ENST00000355683 TROAPQ12815 778 aa16.78■□□□□ 0.28
STRN3-201ENST00000355683 MB21D1Q8N884 522 aa16.78■□□□□ 0.28
STRN3-201ENST00000355683 PYM1Q9BRP8 204 aaKnown RBP16.78■□□□□ 0.28
STRN3-201ENST00000355683 MORC2Q9Y6X9 1032 aaPredicted RBP16.78■□□□□ 0.28
STRN3-201ENST00000355683 ERVV-1B6SEH8 477 aa16.78■□□□□ 0.28
STRN3-201ENST00000355683 ADAMTS3O15072 1205 aa16.78■□□□□ 0.28
STRN3-201ENST00000355683 CAMTA2O94983 1202 aa16.78■□□□□ 0.28
STRN3-201ENST00000355683 DPYDQ12882 1025 aa16.78■□□□□ 0.28
STRN3-201ENST00000355683 TRIML1Q8N9V2 468 aa16.78■□□□□ 0.28
STRN3-201ENST00000355683 EPB41L5Q9HCM4 733 aa16.78■□□□□ 0.28
STRN3-201ENST00000355683 POTEB3A0JP26 581 aa16.78■□□□□ 0.28
STRN3-201ENST00000355683 POTECB2RU33 542 aa16.78■□□□□ 0.28
STRN3-201ENST00000355683 SERPINB2P05120 415 aa16.78■□□□□ 0.28
STRN3-201ENST00000355683 TRIM28Q13263 835 aaKnown RBP16.78■□□□□ 0.28
STRN3-201ENST00000355683 POTEBQ6S5H4 581 aa16.78■□□□□ 0.28
STRN3-201ENST00000355683 MICALCLQ6ZW33 695 aa16.78■□□□□ 0.28
STRN3-201ENST00000355683 DEFB132Q7Z7B7 95 aa16.78■□□□□ 0.28
STRN3-201ENST00000355683 BCAS4Q8TDM0 211 aa16.78■□□□□ 0.28
STRN3-201ENST00000355683 DDX12PQ92771 950 aa16.78■□□□□ 0.28
STRN3-201ENST00000355683 ZNF34Q8IZ26 560 aa16.77■□□□□ 0.28
STRN3-201ENST00000355683 PNKPQ96T60 521 aa16.77■□□□□ 0.28
STRN3-201ENST00000355683 INTS13Q9NVM9 706 aa16.77■□□□□ 0.28
STRN3-201ENST00000355683 SERPINA10Q9UK55 444 aa16.77■□□□□ 0.28
STRN3-201ENST00000355683 TACC3Q9Y6A5 838 aa16.77■□□□□ 0.28
STRN3-201ENST00000355683 GNGT1P63211 74 aa16.77■□□□□ 0.28
STRN3-201ENST00000355683 SFMBT2Q5VUG0 894 aa16.77■□□□□ 0.28
STRN3-201ENST00000355683 RBM43Q6ZSC3 357 aaKnown RBP16.77■□□□□ 0.28
STRN3-201ENST00000355683 LINC00116Q8NCU8 138 aa16.77■□□□□ 0.28
STRN3-201ENST00000355683 ELMO3Q96BJ8 720 aa16.77■□□□□ 0.28
STRN3-201ENST00000355683 NOX5Q96PH1 765 aa16.77■□□□□ 0.28
STRN3-201ENST00000355683 TCHPQ9BT92 498 aa16.77■□□□□ 0.28
STRN3-201ENST00000355683 PHLPP2Q6ZVD8 1323 aa16.77■□□□□ 0.27
STRN3-201ENST00000355683 NR2F2P24468 414 aa16.77■□□□□ 0.27
STRN3-201ENST00000355683 PFKFB3Q16875 520 aaPredicted RBP16.77■□□□□ 0.27
STRN3-201ENST00000355683 OPA1O60313 960 aa16.76■□□□□ 0.27
STRN3-201ENST00000355683 DDAH1O94760 285 aa16.76■□□□□ 0.27
STRN3-201ENST00000355683 MYCNP04198 464 aaPredicted RBP16.76■□□□□ 0.27
STRN3-201ENST00000355683 EEF2P13639 858 aaKnown RBP16.76■□□□□ 0.27
STRN3-201ENST00000355683 AKR1B1P15121 316 aa16.76■□□□□ 0.27
STRN3-201ENST00000355683 INPP5BP32019 993 aa16.76■□□□□ 0.27
STRN3-201ENST00000355683 LONP1P36776 959 aaKnown RBP16.76■□□□□ 0.27
STRN3-201ENST00000355683 ADD3Q9UEY8 706 aaKnown RBP16.76■□□□□ 0.27
STRN3-201ENST00000355683 DLG5Q8TDM6 1919 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms