RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 KRT82Q9NSB4 513 aa16.17■□□□□ 0.18
LMX1B-201ENST00000355497 IL13P35225 146 aa16.17■□□□□ 0.18
LMX1B-201ENST00000355497 SLC35F6Q8N357 371 aa16.17■□□□□ 0.18
LMX1B-201ENST00000355497 TXLNGQ9NUQ3 528 aa16.17■□□□□ 0.18
LMX1B-201ENST00000355497 STK17AQ9UEE5 414 aa16.17■□□□□ 0.18
LMX1B-201ENST00000355497 DAAM1Q9Y4D1 1078 aa16.17■□□□□ 0.18
LMX1B-201ENST00000355497 CHL1O00533 1208 aa16.16■□□□□ 0.18
LMX1B-201ENST00000355497 MAP3K7O43318 606 aa16.16■□□□□ 0.18
LMX1B-201ENST00000355497 MAPK4P31152 587 aa16.16■□□□□ 0.18
LMX1B-201ENST00000355497 CTSWP56202 376 aa16.16■□□□□ 0.18
LMX1B-201ENST00000355497 TNFAIP1Q13829 316 aa16.16■□□□□ 0.18
LMX1B-201ENST00000355497 LRRC47Q8N1G4 583 aaKnown RBP16.16■□□□□ 0.18
LMX1B-201ENST00000355497 ANLNQ9NQW6 1124 aa16.16■□□□□ 0.18
LMX1B-201ENST00000355497 PNMA2Q9UL42 364 aa16.16■□□□□ 0.18
LMX1B-201ENST00000355497 TPCN1Q9ULQ1 816 aa16.16■□□□□ 0.18
LMX1B-201ENST00000355497 TNKSO95271 1327 aa16.16■□□□□ 0.18
LMX1B-201ENST00000355497 KLRF2D3W0D1 207 aa16.16■□□□□ 0.18
LMX1B-201ENST00000355497 ECEL1O95672 775 aa16.16■□□□□ 0.18
LMX1B-201ENST00000355497 CARD14Q9BXL6 1004 aa16.16■□□□□ 0.18
LMX1B-201ENST00000355497 RRP15Q9Y3B9 282 aaKnown RBP16.16■□□□□ 0.18
LMX1B-201ENST00000355497 XPAP23025 273 aaPredicted RBP16.16■□□□□ 0.18
LMX1B-201ENST00000355497 PACSIN2Q9UNF0 486 aaPredicted RBP16.16■□□□□ 0.18
LMX1B-201ENST00000355497 CLIC4Q9Y696 253 aa16.16■□□□□ 0.18
LMX1B-201ENST00000355497 TYW5A2RUC4 315 aaKnown RBP16.16■□□□□ 0.18
LMX1B-201ENST00000355497 TRPA1O75762 1119 aa16.16■□□□□ 0.18
LMX1B-201ENST00000355497 GTF2IP78347 998 aa16.16■□□□□ 0.18
LMX1B-201ENST00000355497 SLC12A1Q13621 1099 aa16.16■□□□□ 0.18
LMX1B-201ENST00000355497 MFSD14BQ5SR56 506 aa16.16■□□□□ 0.18
LMX1B-201ENST00000355497 ANKRD13CQ8N6S4 541 aa16.16■□□□□ 0.18
LMX1B-201ENST00000355497 ANKRD36BP1Q96IX9 119 aa16.16■□□□□ 0.18
LMX1B-201ENST00000355497 FGD4Q96M96 766 aa16.16■□□□□ 0.18
LMX1B-201ENST00000355497 TUBGCP2Q9BSJ2 902 aa16.16■□□□□ 0.18
LMX1B-201ENST00000355497 JRKLQ9Y4A0 524 aa16.16■□□□□ 0.18
LMX1B-201ENST00000355497 ADCY9O60503 1353 aa16.16■□□□□ 0.18
LMX1B-201ENST00000355497 SEC31AO94979 1220 aaKnown RBP16.16■□□□□ 0.18
LMX1B-201ENST00000355497 ZKSCAN8Q15776 578 aaPredicted RBP16.16■□□□□ 0.18
LMX1B-201ENST00000355497 SGO2Q562F6 1265 aa16.16■□□□□ 0.18
LMX1B-201ENST00000355497 GJA10Q969M2 543 aa16.16■□□□□ 0.18
LMX1B-201ENST00000355497 SCOCQ9UIL1 159 aa16.16■□□□□ 0.18
LMX1B-201ENST00000355497 MTMR6Q9Y217 621 aa16.16■□□□□ 0.18
LMX1B-201ENST00000355497 POLA2Q14181 598 aa16.15■□□□□ 0.18
LMX1B-201ENST00000355497 BEGAINQ9BUH8 593 aa16.15■□□□□ 0.18
LMX1B-201ENST00000355497 EPB41L5Q9HCM4 733 aa16.15■□□□□ 0.18
LMX1B-201ENST00000355497 SOS2Q07890 1332 aaPredicted RBP16.15■□□□□ 0.18
LMX1B-201ENST00000355497 ENC1O14682 589 aa16.15■□□□□ 0.18
LMX1B-201ENST00000355497 PPIP5K2O43314 1243 aa16.15■□□□□ 0.18
LMX1B-201ENST00000355497 HEXIM1O94992 359 aaKnown RBP16.15■□□□□ 0.18
LMX1B-201ENST00000355497 ADCY1Q08828 1119 aa16.15■□□□□ 0.18
LMX1B-201ENST00000355497 SNX1Q13596 522 aa16.15■□□□□ 0.18
LMX1B-201ENST00000355497 ZNF653Q96CK0 615 aa16.15■□□□□ 0.18
LMX1B-201ENST00000355497 CUEDC2Q9H467 287 aa16.15■□□□□ 0.18
LMX1B-201ENST00000355497 LGR6Q9HBX8 967 aa16.15■□□□□ 0.18
LMX1B-201ENST00000355497 SCHIP1Q9P0W5 487 aaPredicted RBP16.15■□□□□ 0.18
LMX1B-201ENST00000355497 ANGPTL2Q9UKU9 493 aa16.15■□□□□ 0.18
LMX1B-201ENST00000355497 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.15■□□□□ 0.18
LMX1B-201ENST00000355497 A2MP01023 1474 aa16.15■□□□□ 0.18
LMX1B-201ENST00000355497 MCF2LO15068 1137 aa16.15■□□□□ 0.18
LMX1B-201ENST00000355497 GOLGA8HP0CJ92 632 aa16.15■□□□□ 0.18
LMX1B-201ENST00000355497 THOC5Q13769 683 aaKnown RBP16.15■□□□□ 0.18
LMX1B-201ENST00000355497 PARD3BQ8TEW8 1205 aa16.15■□□□□ 0.18
LMX1B-201ENST00000355497 TCP11Q8WWU5 503 aa16.15■□□□□ 0.18
LMX1B-201ENST00000355497 ABTB1Q969K4 478 aaPredicted RBP16.15■□□□□ 0.18
LMX1B-201ENST00000355497 CNOT10Q9H9A5 744 aaKnown RBP16.15■□□□□ 0.18
LMX1B-201ENST00000355497 ZSWIM6Q9HCJ5 1215 aa16.15■□□□□ 0.18
LMX1B-201ENST00000355497 KRT1P04264 644 aa16.15■□□□□ 0.18
LMX1B-201ENST00000355497 CCDC24Q8N4L8 307 aa16.15■□□□□ 0.18
LMX1B-201ENST00000355497 SPDYE2BA6NHP3 402 aa16.14■□□□□ 0.18
LMX1B-201ENST00000355497 LAD1O00515 517 aa16.14■□□□□ 0.18
LMX1B-201ENST00000355497 XPOTO43592 962 aaKnown RBP16.14■□□□□ 0.18
LMX1B-201ENST00000355497 AFPP02771 609 aaKnown RBP16.14■□□□□ 0.18
LMX1B-201ENST00000355497 SPDYE6P0CI01 402 aa16.14■□□□□ 0.18
LMX1B-201ENST00000355497 PSMC2P35998 433 aaKnown RBP16.14■□□□□ 0.18
LMX1B-201ENST00000355497 PTH1RQ03431 593 aa16.14■□□□□ 0.18
LMX1B-201ENST00000355497 CERKLQ49MI3 558 aaPredicted RBP16.14■□□□□ 0.18
LMX1B-201ENST00000355497 TCP11X2Q5H9J9 407 aa16.14■□□□□ 0.18
LMX1B-201ENST00000355497 ODR4Q5SWX8 454 aa16.14■□□□□ 0.18
LMX1B-201ENST00000355497 ZNF449Q6P9G9 518 aa16.14■□□□□ 0.18
LMX1B-201ENST00000355497 RPS6KC1Q96S38 1066 aa16.14■□□□□ 0.18
LMX1B-201ENST00000355497 PTGDRQ13258 359 aa16.14■□□□□ 0.17
LMX1B-201ENST00000355497 FAM133BQ5BKY9 247 aaKnown RBP16.14■□□□□ 0.17
LMX1B-201ENST00000355497 PPP1R2P3Q6NXS1 205 aa16.14■□□□□ 0.17
LMX1B-201ENST00000355497 TLK1Q9UKI8 766 aa16.14■□□□□ 0.17
LMX1B-201ENST00000355497 A0A0D9SFI3 127 aa16.14■□□□□ 0.17
LMX1B-201ENST00000355497 NEURL1BA8MQ27 555 aa16.14■□□□□ 0.17
LMX1B-201ENST00000355497 ATP8A1Q9Y2Q0 1164 aa16.14■□□□□ 0.17
LMX1B-201ENST00000355497 PGRMC1O00264 195 aaKnown RBP16.14■□□□□ 0.17
LMX1B-201ENST00000355497 MT-ND3P03897 115 aa16.14■□□□□ 0.17
LMX1B-201ENST00000355497 EEF1DP29692 281 aaKnown RBP16.14■□□□□ 0.17
LMX1B-201ENST00000355497 E2F5Q15329 346 aa16.14■□□□□ 0.17
LMX1B-201ENST00000355497 ARMC9Q7Z3E5 817 aa16.14■□□□□ 0.17
LMX1B-201ENST00000355497 CCHCR1Q8TD31 782 aa16.14■□□□□ 0.17
LMX1B-201ENST00000355497 PGBD1Q96JS3 809 aa16.14■□□□□ 0.17
LMX1B-201ENST00000355497 ITSN2Q9NZM3 1697 aa16.14■□□□□ 0.17
LMX1B-201ENST00000355497 HNRNPCL2B2RXH8 293 aa16.14■□□□□ 0.17
LMX1B-201ENST00000355497 HNRNPCL1O60812 293 aaKnown RBP16.14■□□□□ 0.17
LMX1B-201ENST00000355497 TOM1L1O75674 476 aa16.14■□□□□ 0.17
LMX1B-201ENST00000355497 EEF1B2P24534 225 aaKnown RBP16.14■□□□□ 0.17
LMX1B-201ENST00000355497 PLTPP55058 493 aa16.14■□□□□ 0.17
LMX1B-201ENST00000355497 IGBP1P78318 339 aa16.14■□□□□ 0.17
LMX1B-201ENST00000355497 RBL2Q08999 1139 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms