RNA–Protein interactions for RNA: ENST00000354192.7

APP-203, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-203ENST00000354192 KRT26Q7Z3Y9 468 aa20.27■□□□□ 0.84
APP-203ENST00000354192 SMCR8Q8TEV9 937 aaPredicted RBP20.27■□□□□ 0.84
APP-203ENST00000354192 RAB34Q9BZG1 259 aa20.27■□□□□ 0.84
APP-203ENST00000354192 L2HGDHQ9H9P8 463 aa20.27■□□□□ 0.84
APP-203ENST00000354192 ZNHIT6Q9NWK9 470 aaKnown RBP20.27■□□□□ 0.84
APP-203ENST00000354192 PNMA6FA0A0J9YX94 578 aa20.27■□□□□ 0.84
APP-203ENST00000354192 POTEB3A0JP26 581 aa20.27■□□□□ 0.84
APP-203ENST00000354192 ERICH4A6NGS2 130 aa20.27■□□□□ 0.84
APP-203ENST00000354192 POTECB2RU33 542 aa20.27■□□□□ 0.84
APP-203ENST00000354192 PPIP5K2O43314 1243 aa20.27■□□□□ 0.84
APP-203ENST00000354192 SRGAP2O75044 1071 aa20.27■□□□□ 0.84
APP-203ENST00000354192 GRB10Q13322 594 aa20.27■□□□□ 0.84
APP-203ENST00000354192 CCDC122Q5T0U0 273 aa20.27■□□□□ 0.84
APP-203ENST00000354192 RBM26Q5T8P6 1007 aaKnown RBP20.27■□□□□ 0.84
APP-203ENST00000354192 NCAPH2Q6IBW4 605 aa20.27■□□□□ 0.84
APP-203ENST00000354192 POTEBQ6S5H4 581 aa20.27■□□□□ 0.84
APP-203ENST00000354192 CYP26C1Q6V0L0 522 aa20.27■□□□□ 0.84
APP-203ENST00000354192 MASTLQ96GX5 879 aa20.27■□□□□ 0.84
APP-203ENST00000354192 PDGFDQ9GZP0 370 aaPredicted RBP20.27■□□□□ 0.84
APP-203ENST00000354192 SCN7AQ01118 1682 aa20.27■□□□□ 0.83
APP-203ENST00000354192 TRAF5O00463 557 aa20.26■□□□□ 0.83
APP-203ENST00000354192 MRPS25P82663 173 aaKnown RBP20.26■□□□□ 0.83
APP-203ENST00000354192 ECM1Q16610 540 aa20.26■□□□□ 0.83
APP-203ENST00000354192 CCDC174Q6PII3 467 aa20.26■□□□□ 0.83
APP-203ENST00000354192 ARGLU1Q9NWB6 273 aaPredicted RBP20.26■□□□□ 0.83
APP-203ENST00000354192 LIMA1Q9UHB6 759 aaKnown RBP20.26■□□□□ 0.83
APP-203ENST00000354192 EPN1Q9Y6I3 576 aaPredicted RBP20.26■□□□□ 0.83
APP-203ENST00000354192 CDC37Q16543 378 aaPredicted RBP20.26■□□□□ 0.83
APP-203ENST00000354192 OR8K1Q8NGG5 319 aa20.26■□□□□ 0.83
APP-203ENST00000354192 GDAP1L1Q96MZ0 367 aa20.26■□□□□ 0.83
APP-203ENST00000354192 CSRNP1Q96S65 589 aa20.26■□□□□ 0.83
APP-203ENST00000354192 RIOX1Q9H6W3 641 aa20.26■□□□□ 0.83
APP-203ENST00000354192 DNAJC18Q9H819 358 aa20.26■□□□□ 0.83
APP-203ENST00000354192 CCDC88AQ3V6T2 1871 aa20.26■□□□□ 0.83
APP-203ENST00000354192 PLEKP08567 350 aaPredicted RBP20.26■□□□□ 0.83
APP-203ENST00000354192 HERC4Q5GLZ8 1057 aaPredicted RBP20.26■□□□□ 0.83
APP-203ENST00000354192 KIAA0895Q8NCT3 520 aa20.26■□□□□ 0.83
APP-203ENST00000354192 GIMAP8Q8ND71 665 aaPredicted RBP20.26■□□□□ 0.83
APP-203ENST00000354192 DUSP10Q9Y6W6 482 aa20.26■□□□□ 0.83
APP-203ENST00000354192 CTAGE9A4FU28 777 aa20.25■□□□□ 0.83
APP-203ENST00000354192 GOLGA6L9A6NEM1 432 aa20.25■□□□□ 0.83
APP-203ENST00000354192 CCDC40Q4G0X9 1142 aa20.25■□□□□ 0.83
APP-203ENST00000354192 FKBP15Q5T1M5 1219 aa20.25■□□□□ 0.83
APP-203ENST00000354192 DUSP9Q99956 384 aaKnown RBP20.25■□□□□ 0.83
APP-203ENST00000354192 ZBTB5O15062 677 aa20.25■□□□□ 0.83
APP-203ENST00000354192 RHOBTB3O94955 611 aa20.25■□□□□ 0.83
APP-203ENST00000354192 CFBP00751 764 aa20.25■□□□□ 0.83
APP-203ENST00000354192 APBA1Q02410 837 aa20.25■□□□□ 0.83
APP-203ENST00000354192 TMTC1Q8IUR5 882 aa20.25■□□□□ 0.83
APP-203ENST00000354192 FAM163AQ96GL9 167 aaPredicted RBP20.25■□□□□ 0.83
APP-203ENST00000354192 ZNF446Q9NWS9 450 aa20.25■□□□□ 0.83
APP-203ENST00000354192 PABPC4Q13310 644 aaKnown RBP eCLIP20.24■□□□□ 0.83
APP-203ENST00000354192 TDRD12Q587J7 1177 aaKnown RBP20.24■□□□□ 0.83
APP-203ENST00000354192 TTI2Q6NXR4 508 aa20.24■□□□□ 0.83
APP-203ENST00000354192 CNNM4Q6P4Q7 775 aa20.24■□□□□ 0.83
APP-203ENST00000354192 DAGLBQ8NCG7 672 aa20.24■□□□□ 0.83
APP-203ENST00000354192 PLEKHA4Q9H4M7 779 aa20.24■□□□□ 0.83
APP-203ENST00000354192 ROBO3Q96MS0 1386 aa20.24■□□□□ 0.83
APP-203ENST00000354192 POTEFA5A3E0 1075 aa20.24■□□□□ 0.83
APP-203ENST00000354192 POTEIP0CG38 1075 aa20.24■□□□□ 0.83
APP-203ENST00000354192 CCNE1P24864 410 aa20.24■□□□□ 0.83
APP-203ENST00000354192 MATR3P43243 847 aaKnown RBP eCLIP20.24■□□□□ 0.83
APP-203ENST00000354192 GABPAQ06546 454 aa20.24■□□□□ 0.83
APP-203ENST00000354192 PTPROQ16827 1216 aa20.24■□□□□ 0.83
APP-203ENST00000354192 CCDC93Q567U6 631 aa20.24■□□□□ 0.83
APP-203ENST00000354192 POTEGQ6S5H5 508 aa20.24■□□□□ 0.83
APP-203ENST00000354192 POTEEQ6S8J3 1075 aa20.24■□□□□ 0.83
APP-203ENST00000354192 PRMT6Q96LA8 375 aaPredicted RBP20.24■□□□□ 0.83
APP-203ENST00000354192 PNMA5Q96PV4 448 aa20.24■□□□□ 0.83
APP-203ENST00000354192 BLOC1S4Q9NUP1 217 aa20.24■□□□□ 0.83
APP-203ENST00000354192 OGFRQ9NZT2 677 aa20.24■□□□□ 0.83
APP-203ENST00000354192 SFI1A8K8P3 1242 aa20.24■□□□□ 0.83
APP-203ENST00000354192 F5H6K3 240 aa20.24■□□□□ 0.83
APP-203ENST00000354192 KLRC3Q07444 240 aa20.24■□□□□ 0.83
APP-203ENST00000354192 CERS3Q8IU89 383 aa20.24■□□□□ 0.83
APP-203ENST00000354192 CYP2W1Q8TAV3 490 aa20.24■□□□□ 0.83
APP-203ENST00000354192 SEMA6BQ9H3T3 888 aa20.24■□□□□ 0.83
APP-203ENST00000354192 LGALS16A8MUM7 142 aa20.23■□□□□ 0.83
APP-203ENST00000354192 RGL2O15211 777 aa20.23■□□□□ 0.83
APP-203ENST00000354192 TADA3O75528 432 aa20.23■□□□□ 0.83
APP-203ENST00000354192 NDUFA10O95299 355 aa20.23■□□□□ 0.83
APP-203ENST00000354192 CHMP4BP1P59074 171 aa20.23■□□□□ 0.83
APP-203ENST00000354192 ABCB5Q2M3G0 1257 aa20.23■□□□□ 0.83
APP-203ENST00000354192 C15orf52Q6ZUT6 534 aaKnown RBP20.23■□□□□ 0.83
APP-203ENST00000354192 CACNA2D4Q7Z3S7 1137 aa20.23■□□□□ 0.83
APP-203ENST00000354192 BMP2KQ9NSY1 1161 aaPredicted RBP20.23■□□□□ 0.83
APP-203ENST00000354192 LAD1O00515 517 aa20.23■□□□□ 0.83
APP-203ENST00000354192 PBX1P40424 430 aa20.23■□□□□ 0.83
APP-203ENST00000354192 ECE1P42892 770 aa20.23■□□□□ 0.83
APP-203ENST00000354192 CAGE1Q8TC20 777 aa20.23■□□□□ 0.83
APP-203ENST00000354192 AK8Q96MA6 479 aa20.23■□□□□ 0.83
APP-203ENST00000354192 ZMYND10O75800 440 aa20.22■□□□□ 0.83
APP-203ENST00000354192 EN1Q05925 392 aaPredicted RBP20.22■□□□□ 0.83
APP-203ENST00000354192 RRAGAQ7L523 313 aa20.22■□□□□ 0.83
APP-203ENST00000354192 KRT222Q8N1A0 295 aa20.22■□□□□ 0.83
APP-203ENST00000354192 FGFBP2Q9BYJ0 223 aa20.22■□□□□ 0.83
APP-203ENST00000354192 JADE2Q9NQC1 790 aa20.22■□□□□ 0.83
APP-203ENST00000354192 DDX41Q9UJV9 622 aaKnown RBP20.22■□□□□ 0.83
APP-203ENST00000354192 KCNJ6P48051 423 aa20.22■□□□□ 0.83
APP-203ENST00000354192 GPBP1Q86WP2 473 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms