RNA–Protein interactions for RNA: ENST00000353278.8

SLC6A20-201, Transcript of solute carrier family 6 member 20, humanhuman

TSL 1 (best) BASIC

Gene SLC6A20, Length 5,247 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A20-201ENST00000353278 CSPG5O95196 566 aa12.29□□□□□ -0.44
SLC6A20-201ENST00000353278 GSPT1P15170 499 aaKnown RBP12.29□□□□□ -0.44
SLC6A20-201ENST00000353278 ARPP19P56211 112 aa12.29□□□□□ -0.44
SLC6A20-201ENST00000353278 HS1BP3Q53T59 392 aa12.29□□□□□ -0.44
SLC6A20-201ENST00000353278 FAM81BQ96LP2 452 aa12.29□□□□□ -0.44
SLC6A20-201ENST00000353278 TMEM206Q9H813 350 aa12.29□□□□□ -0.44
SLC6A20-201ENST00000353278 CDK12Q9NYV4 1490 aaPredicted RBP12.29□□□□□ -0.44
SLC6A20-201ENST00000353278 DTNBO60941 627 aa12.29□□□□□ -0.44
SLC6A20-201ENST00000353278 CACNB3P54284 484 aa12.29□□□□□ -0.44
SLC6A20-201ENST00000353278 MFAP3P55082 362 aa12.29□□□□□ -0.44
SLC6A20-201ENST00000353278 TBC1D9BQ66K14 1250 aa12.29□□□□□ -0.44
SLC6A20-201ENST00000353278 C4orf50Q6ZRC1 276 aa12.29□□□□□ -0.44
SLC6A20-201ENST00000353278 SLF1Q9BQI6 1058 aa12.29□□□□□ -0.44
SLC6A20-201ENST00000353278 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.29□□□□□ -0.44
SLC6A20-201ENST00000353278 MINPP1Q9UNW1 487 aa12.29□□□□□ -0.44
SLC6A20-201ENST00000353278 V9GYY5 206 aaPredicted RBP12.29□□□□□ -0.44
SLC6A20-201ENST00000353278 ARHGAP31Q2M1Z3 1444 aa12.29□□□□□ -0.44
SLC6A20-201ENST00000353278 PNMA6FA0A0J9YX94 578 aa12.29□□□□□ -0.44
SLC6A20-201ENST00000353278 A6NJR5 290 aa12.29□□□□□ -0.44
SLC6A20-201ENST00000353278 GOLGA8CPA6NN73 597 aa12.29□□□□□ -0.44
SLC6A20-201ENST00000353278 MAN1A1P33908 653 aa12.29□□□□□ -0.44
SLC6A20-201ENST00000353278 FYB2Q5VWT5 728 aa12.29□□□□□ -0.44
SLC6A20-201ENST00000353278 NME8Q8N427 588 aa12.29□□□□□ -0.44
SLC6A20-201ENST00000353278 DCAF4Q8WV16 495 aa12.29□□□□□ -0.44
SLC6A20-201ENST00000353278 SYMPKQ92797 1274 aaKnown RBP12.29□□□□□ -0.44
SLC6A20-201ENST00000353278 FAM49AQ9H0Q0 323 aaPredicted RBP12.29□□□□□ -0.44
SLC6A20-201ENST00000353278 MYO1EQ12965 1108 aa12.29□□□□□ -0.44
SLC6A20-201ENST00000353278 DGKHQ86XP1 1220 aa12.29□□□□□ -0.44
SLC6A20-201ENST00000353278 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.29□□□□□ -0.44
SLC6A20-201ENST00000353278 RIC8AQ9NPQ8 531 aa12.29□□□□□ -0.44
SLC6A20-201ENST00000353278 ZCCHC11Q5TAX3 1644 aaKnown RBP12.29□□□□□ -0.44
SLC6A20-201ENST00000353278 ABCC3O15438 1527 aa12.29□□□□□ -0.44
SLC6A20-201ENST00000353278 SYNJ2BP-COX16A0A087WUM0 186 aa12.28□□□□□ -0.44
SLC6A20-201ENST00000353278 USP17L10C9JJH3 530 aa12.28□□□□□ -0.44
SLC6A20-201ENST00000353278 CYP21A2P08686 494 aa12.28□□□□□ -0.44
SLC6A20-201ENST00000353278 TFAMQ00059 246 aaKnown RBP12.28□□□□□ -0.44
SLC6A20-201ENST00000353278 R3HDM1Q15032 1099 aaKnown RBP12.28□□□□□ -0.44
SLC6A20-201ENST00000353278 SURF1Q15526 300 aa12.28□□□□□ -0.44
SLC6A20-201ENST00000353278 VPS72Q15906 364 aa12.28□□□□□ -0.44
SLC6A20-201ENST00000353278 MFSD14CQ5VZR4 134 aa12.28□□□□□ -0.44
SLC6A20-201ENST00000353278 KRBA2Q6ZNG9 492 aa12.28□□□□□ -0.44
SLC6A20-201ENST00000353278 GIMAP8Q8ND71 665 aaPredicted RBP12.28□□□□□ -0.44
SLC6A20-201ENST00000353278 RASGRP4Q8TDF6 673 aa12.28□□□□□ -0.44
SLC6A20-201ENST00000353278 FAM167AQ96KS9 214 aa12.28□□□□□ -0.44
SLC6A20-201ENST00000353278 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.28□□□□□ -0.44
SLC6A20-201ENST00000353278 COX16Q9P0S2 106 aa12.28□□□□□ -0.44
SLC6A20-201ENST00000353278 TTC37Q6PGP7 1564 aa12.28□□□□□ -0.44
SLC6A20-201ENST00000353278 KRT10P13645 584 aa12.28□□□□□ -0.44
SLC6A20-201ENST00000353278 MYL7Q01449 175 aa12.28□□□□□ -0.44
SLC6A20-201ENST00000353278 STXBP2Q15833 593 aa12.28□□□□□ -0.44
SLC6A20-201ENST00000353278 CATSPER4Q7RTX7 472 aa12.28□□□□□ -0.44
SLC6A20-201ENST00000353278 KLHL7Q8IXQ5 586 aa12.28□□□□□ -0.44
SLC6A20-201ENST00000353278 EXOC3L4Q17RC7 722 aa12.28□□□□□ -0.44
SLC6A20-201ENST00000353278 CCDC121Q6ZUS5 278 aa12.28□□□□□ -0.44
SLC6A20-201ENST00000353278 INTS8Q75QN2 995 aaKnown RBP12.28□□□□□ -0.44
SLC6A20-201ENST00000353278 PCDHB4Q9Y5E5 795 aa12.28□□□□□ -0.44
SLC6A20-201ENST00000353278 CRB1P82279 1406 aa12.28□□□□□ -0.44
SLC6A20-201ENST00000353278 H2AFZP0C0S5 128 aa12.28□□□□□ -0.44
SLC6A20-201ENST00000353278 CYP19A1P11511 503 aaPredicted RBP12.28□□□□□ -0.44
SLC6A20-201ENST00000353278 ANXA13P27216 316 aa12.28□□□□□ -0.44
SLC6A20-201ENST00000353278 COPB2P35606 906 aa12.28□□□□□ -0.44
SLC6A20-201ENST00000353278 ZNF75DP51815 510 aa12.28□□□□□ -0.44
SLC6A20-201ENST00000353278 MTX1Q13505 466 aa12.28□□□□□ -0.44
SLC6A20-201ENST00000353278 H2AFVQ71UI9 128 aa12.28□□□□□ -0.44
SLC6A20-201ENST00000353278 STK17AQ9UEE5 414 aa12.28□□□□□ -0.44
SLC6A20-201ENST00000353278 PTCH1Q13635 1447 aa12.27□□□□□ -0.44
SLC6A20-201ENST00000353278 EVCP57679 992 aa12.27□□□□□ -0.44
SLC6A20-201ENST00000353278 DNAJC21Q5F1R6 531 aaKnown RBP12.27□□□□□ -0.44
SLC6A20-201ENST00000353278 PUS7LQ9H0K6 701 aaKnown RBP12.27□□□□□ -0.44
SLC6A20-201ENST00000353278 CPSF3Q9UKF6 684 aaKnown RBP12.27□□□□□ -0.44
SLC6A20-201ENST00000353278 PSMC2P35998 433 aaKnown RBP12.27□□□□□ -0.44
SLC6A20-201ENST00000353278 PPP2R5EQ16537 467 aa12.27□□□□□ -0.44
SLC6A20-201ENST00000353278 LONRF2Q1L5Z9 754 aa12.27□□□□□ -0.44
SLC6A20-201ENST00000353278 ZNF449Q6P9G9 518 aa12.27□□□□□ -0.44
SLC6A20-201ENST00000353278 CTAGE3PQ8IX95 158 aa12.27□□□□□ -0.44
SLC6A20-201ENST00000353278 SP8Q8IXZ3 490 aa12.27□□□□□ -0.44
SLC6A20-201ENST00000353278 TCP11Q8WWU5 503 aa12.27□□□□□ -0.44
SLC6A20-201ENST00000353278 OSBP2Q969R2 916 aa12.27□□□□□ -0.44
SLC6A20-201ENST00000353278 LRRC4Q9HBW1 653 aa12.27□□□□□ -0.44
SLC6A20-201ENST00000353278 SLC8A2Q9UPR5 921 aa12.27□□□□□ -0.44
SLC6A20-201ENST00000353278 BRD1O95696 1058 aa12.27□□□□□ -0.45
SLC6A20-201ENST00000353278 NR2F2P24468 414 aa12.27□□□□□ -0.45
SLC6A20-201ENST00000353278 OTUD5Q96G74 571 aa12.27□□□□□ -0.45
SLC6A20-201ENST00000353278 PGBD1Q96JS3 809 aa12.27□□□□□ -0.45
SLC6A20-201ENST00000353278 TIGD1Q96MW7 591 aa12.27□□□□□ -0.45
SLC6A20-201ENST00000353278 RAB17Q9H0T7 212 aa12.27□□□□□ -0.45
SLC6A20-201ENST00000353278 PIH1D3Q9NQM4 214 aaKnown RBP12.27□□□□□ -0.45
SLC6A20-201ENST00000353278 FEM1BQ9UK73 627 aa12.27□□□□□ -0.45
SLC6A20-201ENST00000353278 KRT15P19012 456 aa12.27□□□□□ -0.45
SLC6A20-201ENST00000353278 POLR2FP61218 127 aaKnown RBP12.27□□□□□ -0.45
SLC6A20-201ENST00000353278 LONRF3Q496Y0 759 aa12.27□□□□□ -0.45
SLC6A20-201ENST00000353278 RINT1Q6NUQ1 792 aa12.27□□□□□ -0.45
SLC6A20-201ENST00000353278 FASTKD5Q7L8L6 764 aaKnown RBP12.27□□□□□ -0.45
SLC6A20-201ENST00000353278 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.27□□□□□ -0.45
SLC6A20-201ENST00000353278 IFNAR1P17181 557 aa12.26□□□□□ -0.45
SLC6A20-201ENST00000353278 SPP2Q13103 211 aa12.26□□□□□ -0.45
SLC6A20-201ENST00000353278 NFIXQ14938 502 aa12.26□□□□□ -0.45
SLC6A20-201ENST00000353278 HHATQ5VTY9 493 aa12.26□□□□□ -0.45
SLC6A20-201ENST00000353278 PPP1R2P3Q6NXS1 205 aa12.26□□□□□ -0.45
SLC6A20-201ENST00000353278 ARMCX2Q7L311 632 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms