RNA–Protein interactions for RNA: ENST00000351288.10

SMPD4-201, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,661 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-201ENST00000351288 PARD6BQ9BYG5 372 aa11.6□□□□□ -0.55
SMPD4-201ENST00000351288 FHOD1Q9Y613 1164 aa11.6□□□□□ -0.55
SMPD4-201ENST00000351288 MORC2Q9Y6X9 1032 aaPredicted RBP11.6□□□□□ -0.55
SMPD4-201ENST00000351288 PHLPP2Q6ZVD8 1323 aa11.6□□□□□ -0.55
SMPD4-201ENST00000351288 DOCK2Q92608 1830 aa11.6□□□□□ -0.55
SMPD4-201ENST00000351288 ZMYND10O75800 440 aa11.6□□□□□ -0.55
SMPD4-201ENST00000351288 STAT3P40763 770 aa11.6□□□□□ -0.55
SMPD4-201ENST00000351288 PODNQ7Z5L7 613 aa11.6□□□□□ -0.55
SMPD4-201ENST00000351288 NLRC4Q9NPP4 1024 aa11.6□□□□□ -0.55
SMPD4-201ENST00000351288 DISC1Q9NRI5 854 aa11.6□□□□□ -0.55
SMPD4-201ENST00000351288 BARHL2Q9NY43 387 aa11.6□□□□□ -0.55
SMPD4-201ENST00000351288 TTC26A0AVF1 554 aa11.59□□□□□ -0.55
SMPD4-201ENST00000351288 SFI1A8K8P3 1242 aa11.59□□□□□ -0.55
SMPD4-201ENST00000351288 F5H6K3 240 aa11.59□□□□□ -0.55
SMPD4-201ENST00000351288 KIF5CO60282 957 aa11.59□□□□□ -0.55
SMPD4-201ENST00000351288 PDHBP11177 359 aa11.59□□□□□ -0.55
SMPD4-201ENST00000351288 H2AFXP16104 143 aaPredicted RBP11.59□□□□□ -0.55
SMPD4-201ENST00000351288 CYP27A1Q02318 531 aa11.59□□□□□ -0.55
SMPD4-201ENST00000351288 KLRC3Q07444 240 aa11.59□□□□□ -0.55
SMPD4-201ENST00000351288 CDC37Q16543 378 aaPredicted RBP11.59□□□□□ -0.55
SMPD4-201ENST00000351288 TCP11X2Q5H9J9 407 aa11.59□□□□□ -0.55
SMPD4-201ENST00000351288 CDKAL1Q5VV42 579 aa11.59□□□□□ -0.55
SMPD4-201ENST00000351288 TPH2Q8IWU9 490 aa11.59□□□□□ -0.55
SMPD4-201ENST00000351288 AGPAT5Q9NUQ2 364 aa11.59□□□□□ -0.55
SMPD4-201ENST00000351288 CCP110O43303 1012 aa11.59□□□□□ -0.55
SMPD4-201ENST00000351288 PHACTR2O75167 634 aa11.59□□□□□ -0.55
SMPD4-201ENST00000351288 ALAS1P13196 640 aa11.59□□□□□ -0.55
SMPD4-201ENST00000351288 SYCP1Q15431 976 aa11.59□□□□□ -0.55
SMPD4-201ENST00000351288 DCAF17Q5H9S7 520 aaPredicted RBP11.59□□□□□ -0.55
SMPD4-201ENST00000351288 CC2D2BQ6DHV5 1058 aa11.59□□□□□ -0.55
SMPD4-201ENST00000351288 FBXO11Q86XK2 927 aa11.59□□□□□ -0.55
SMPD4-201ENST00000351288 NHSL1Q5SYE7 1610 aa11.59□□□□□ -0.55
SMPD4-201ENST00000351288 COL14A1Q05707 1796 aaKnown RBP11.59□□□□□ -0.55
SMPD4-201ENST00000351288 BCORQ6W2J9 1755 aa11.59□□□□□ -0.55
SMPD4-201ENST00000351288 AKR1B10O60218 316 aa11.59□□□□□ -0.55
SMPD4-201ENST00000351288 POLD1P28340 1107 aa11.59□□□□□ -0.55
SMPD4-201ENST00000351288 PLA2G4AP47712 749 aa11.59□□□□□ -0.55
SMPD4-201ENST00000351288 STK4Q13043 487 aa11.59□□□□□ -0.55
SMPD4-201ENST00000351288 QRICH1Q2TAL8 776 aa11.59□□□□□ -0.55
SMPD4-201ENST00000351288 GLIS3Q8NEA6 775 aa11.59□□□□□ -0.55
SMPD4-201ENST00000351288 LZTS2Q9BRK4 669 aa11.59□□□□□ -0.55
SMPD4-201ENST00000351288 PLEKHA4Q9H4M7 779 aa11.59□□□□□ -0.55
SMPD4-201ENST00000351288 DUSP10Q9Y6W6 482 aa11.59□□□□□ -0.55
SMPD4-201ENST00000351288 LRP5O75197 1615 aa11.59□□□□□ -0.55
SMPD4-201ENST00000351288 GTPBP6O43824 516 aaPredicted RBP11.58□□□□□ -0.55
SMPD4-201ENST00000351288 MAP3K9P80192 1104 aa11.58□□□□□ -0.55
SMPD4-201ENST00000351288 C16orf86Q6ZW13 317 aa11.58□□□□□ -0.55
SMPD4-201ENST00000351288 IRF2BP1Q8IU81 584 aa11.58□□□□□ -0.55
SMPD4-201ENST00000351288 C4orf32Q8N8J7 132 aa11.58□□□□□ -0.55
SMPD4-201ENST00000351288 TSG101Q99816 390 aa11.58□□□□□ -0.55
SMPD4-201ENST00000351288 ABHD10Q9NUJ1 306 aa11.58□□□□□ -0.55
SMPD4-201ENST00000351288 LUC7L2Q9Y383 392 aaKnown RBP11.58□□□□□ -0.55
SMPD4-201ENST00000351288 MRFAP1Q9Y605 127 aa11.58□□□□□ -0.55
SMPD4-201ENST00000351288 MACROD2A1Z1Q3 448 aa11.58□□□□□ -0.56
SMPD4-201ENST00000351288 USP8P40818 1118 aa11.58□□□□□ -0.56
SMPD4-201ENST00000351288 TMEM39BQ9GZU3 492 aa11.58□□□□□ -0.56
SMPD4-201ENST00000351288 FZD1Q9UP38 647 aa11.58□□□□□ -0.56
SMPD4-201ENST00000351288 STXBP3O00186 592 aa11.58□□□□□ -0.56
SMPD4-201ENST00000351288 TBCAO75347 108 aaKnown RBP11.58□□□□□ -0.56
SMPD4-201ENST00000351288 ECE1P42892 770 aa11.58□□□□□ -0.56
SMPD4-201ENST00000351288 FAM83BQ5T0W9 1011 aa11.58□□□□□ -0.56
SMPD4-201ENST00000351288 CCDC155Q8N6L0 562 aa11.58□□□□□ -0.56
SMPD4-201ENST00000351288 ANKRD13CQ8N6S4 541 aa11.58□□□□□ -0.56
SMPD4-201ENST00000351288 ARHGEF10LQ9HCE6 1279 aa11.58□□□□□ -0.56
SMPD4-201ENST00000351288 NID2Q14112 1375 aa11.58□□□□□ -0.56
SMPD4-201ENST00000351288 A0A0U1RQG5 324 aaPredicted RBP11.57□□□□□ -0.56
SMPD4-201ENST00000351288 FGRP09769 529 aa11.57□□□□□ -0.56
SMPD4-201ENST00000351288 LONP1P36776 959 aaKnown RBP11.57□□□□□ -0.56
SMPD4-201ENST00000351288 RHBDL3P58872 404 aa11.57□□□□□ -0.56
SMPD4-201ENST00000351288 ZNF658Q5TYW1 1059 aaPredicted RBP11.57□□□□□ -0.56
SMPD4-201ENST00000351288 KCND1Q9NSA2 647 aa11.57□□□□□ -0.56
SMPD4-201ENST00000351288 PLEKP08567 350 aaPredicted RBP11.57□□□□□ -0.56
SMPD4-201ENST00000351288 BMS1Q14692 1282 aaKnown RBP11.57□□□□□ -0.56
SMPD4-201ENST00000351288 ASPRV1Q53RT3 343 aa11.57□□□□□ -0.56
SMPD4-201ENST00000351288 KRT26Q7Z3Y9 468 aa11.57□□□□□ -0.56
SMPD4-201ENST00000351288 SYCP3Q8IZU3 236 aa11.57□□□□□ -0.56
SMPD4-201ENST00000351288 NEK11Q8NG66 645 aa11.57□□□□□ -0.56
SMPD4-201ENST00000351288 SMCR8Q8TEV9 937 aaPredicted RBP11.57□□□□□ -0.56
SMPD4-201ENST00000351288 CTAGE1Q96RT6 745 aa11.57□□□□□ -0.56
SMPD4-201ENST00000351288 NUDT12Q9BQG2 462 aa11.57□□□□□ -0.56
SMPD4-201ENST00000351288 ARGLU1Q9NWB6 273 aaPredicted RBP11.57□□□□□ -0.56
SMPD4-201ENST00000351288 E9PMD0 336 aa11.57□□□□□ -0.56
SMPD4-201ENST00000351288 BMP3P12645 472 aa11.57□□□□□ -0.56
SMPD4-201ENST00000351288 DPEP1P16444 411 aa11.57□□□□□ -0.56
SMPD4-201ENST00000351288 IBSPP21815 317 aaPredicted RBP11.57□□□□□ -0.56
SMPD4-201ENST00000351288 PPP4CP60510 307 aa11.57□□□□□ -0.56
SMPD4-201ENST00000351288 TERF2Q15554 542 aa11.57□□□□□ -0.56
SMPD4-201ENST00000351288 SLC15A2Q16348 729 aa11.57□□□□□ -0.56
SMPD4-201ENST00000351288 GPBP1Q86WP2 473 aa11.57□□□□□ -0.56
SMPD4-201ENST00000351288 FBXO28Q9NVF7 368 aa11.57□□□□□ -0.56
SMPD4-201ENST00000351288 EFCAB8A8MWE9 144 aa11.56□□□□□ -0.56
SMPD4-201ENST00000351288 RCAN1P53805 252 aa11.56□□□□□ -0.56
SMPD4-201ENST00000351288 RNASE9P60153 205 aaKnown RBP11.56□□□□□ -0.56
SMPD4-201ENST00000351288 FAM193AP78312 1265 aa11.56□□□□□ -0.56
SMPD4-201ENST00000351288 PIGOQ8TEQ8 1089 aa11.56□□□□□ -0.56
SMPD4-201ENST00000351288 PNKPQ96T60 521 aa11.56□□□□□ -0.56
SMPD4-201ENST00000351288 PYM1Q9BRP8 204 aaKnown RBP11.56□□□□□ -0.56
SMPD4-201ENST00000351288 MKRN1Q9UHC7 482 aaKnown RBP11.56□□□□□ -0.56
SMPD4-201ENST00000351288 SPA17Q15506 151 aa11.56□□□□□ -0.56
SMPD4-201ENST00000351288 ANKRD40Q6AI12 368 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms