RNA–Protein interactions for RNA: ENST00000349228.8

TNFSF13-202, Transcript of TNF superfamily member 13, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13, Length 2,036 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-202ENST00000349228 GPS2Q13227 327 aa17.26■□□□□ 0.35
TNFSF13-202ENST00000349228 GRB10Q13322 594 aa17.26■□□□□ 0.35
TNFSF13-202ENST00000349228 LONRF2Q1L5Z9 754 aa17.26■□□□□ 0.35
TNFSF13-202ENST00000349228 KRT79Q5XKE5 535 aa17.26■□□□□ 0.35
TNFSF13-202ENST00000349228 POTEDQ86YR6 584 aa17.26■□□□□ 0.35
TNFSF13-202ENST00000349228 LARP4BQ92615 738 aaKnown RBP17.26■□□□□ 0.35
TNFSF13-202ENST00000349228 UBA5Q9GZZ9 404 aa17.26■□□□□ 0.35
TNFSF13-202ENST00000349228 LRRC4BQ9NT99 713 aa17.26■□□□□ 0.35
TNFSF13-202ENST00000349228 PUF60Q9UHX1 559 aaKnown RBP17.26■□□□□ 0.35
TNFSF13-202ENST00000349228 REXO2Q9Y3B8 237 aaKnown RBP17.26■□□□□ 0.35
TNFSF13-202ENST00000349228 HNRNPH3P31942 346 aaKnown RBP17.25■□□□□ 0.35
TNFSF13-202ENST00000349228 MRPL12P52815 198 aaKnown RBP17.25■□□□□ 0.35
TNFSF13-202ENST00000349228 ARHGAP27Q6ZUM4 889 aa17.25■□□□□ 0.35
TNFSF13-202ENST00000349228 CCDC84Q86UT8 332 aaPredicted RBP17.25■□□□□ 0.35
TNFSF13-202ENST00000349228 TSGA10Q9BZW7 698 aa17.25■□□□□ 0.35
TNFSF13-202ENST00000349228 ANKZF1Q9H8Y5 726 aa17.25■□□□□ 0.35
TNFSF13-202ENST00000349228 CDK5RAP2Q96SN8 1893 aa17.25■□□□□ 0.35
TNFSF13-202ENST00000349228 MCM3P25205 808 aa17.25■□□□□ 0.35
TNFSF13-202ENST00000349228 ZNF543Q08ER8 600 aa17.25■□□□□ 0.35
TNFSF13-202ENST00000349228 EPC1Q9H2F5 836 aa17.25■□□□□ 0.35
TNFSF13-202ENST00000349228 BLOC1S4Q9NUP1 217 aa17.25■□□□□ 0.35
TNFSF13-202ENST00000349228 SERPINB13Q9UIV8 391 aa17.25■□□□□ 0.35
TNFSF13-202ENST00000349228 GUCA1BQ9UMX6 200 aa17.25■□□□□ 0.35
TNFSF13-202ENST00000349228 MAP2K7O14733 419 aa17.24■□□□□ 0.35
TNFSF13-202ENST00000349228 CLSTN1O94985 981 aa17.24■□□□□ 0.35
TNFSF13-202ENST00000349228 GTF2IP78347 998 aa17.24■□□□□ 0.35
TNFSF13-202ENST00000349228 SMC1AQ14683 1233 aaKnown RBP17.24■□□□□ 0.35
TNFSF13-202ENST00000349228 MIIPQ5JXC2 388 aa17.24■□□□□ 0.35
TNFSF13-202ENST00000349228 CCDC122Q5T0U0 273 aa17.24■□□□□ 0.35
TNFSF13-202ENST00000349228 FAM182BQ5T319 152 aa17.24■□□□□ 0.35
TNFSF13-202ENST00000349228 PAPD7Q5XG87 772 aaKnown RBP17.24■□□□□ 0.35
TNFSF13-202ENST00000349228 HDXQ7Z353 690 aa17.24■□□□□ 0.35
TNFSF13-202ENST00000349228 TRAPPC11Q7Z392 1133 aa17.24■□□□□ 0.35
TNFSF13-202ENST00000349228 KIAA1328Q86T90 577 aa17.24■□□□□ 0.35
TNFSF13-202ENST00000349228 SLC51AQ86UW1 340 aa17.24■□□□□ 0.35
TNFSF13-202ENST00000349228 RAD54LQ92698 747 aa17.24■□□□□ 0.35
TNFSF13-202ENST00000349228 SECISBP2LQ93073 1101 aaKnown RBP17.24■□□□□ 0.35
TNFSF13-202ENST00000349228 CCDC17Q96LX7 622 aa17.24■□□□□ 0.35
TNFSF13-202ENST00000349228 PNMA5Q96PV4 448 aa17.24■□□□□ 0.35
TNFSF13-202ENST00000349228 EDEM3Q9BZQ6 932 aa17.24■□□□□ 0.35
TNFSF13-202ENST00000349228 TMEM260Q9NX78 707 aa17.24■□□□□ 0.35
TNFSF13-202ENST00000349228 ANO9A1A5B4 782 aa17.23■□□□□ 0.35
TNFSF13-202ENST00000349228 UBAP1LF5GYI3 381 aa17.23■□□□□ 0.35
TNFSF13-202ENST00000349228 FCER1AP12319 257 aa17.23■□□□□ 0.35
TNFSF13-202ENST00000349228 HERVK_113P62684 666 aa17.23■□□□□ 0.35
TNFSF13-202ENST00000349228 TMEM119Q4V9L6 283 aa17.23■□□□□ 0.35
TNFSF13-202ENST00000349228 PROM2Q8N271 834 aa17.23■□□□□ 0.35
TNFSF13-202ENST00000349228 KIAA0895Q8NCT3 520 aa17.23■□□□□ 0.35
TNFSF13-202ENST00000349228 CUL5Q93034 780 aa17.23■□□□□ 0.35
TNFSF13-202ENST00000349228 PCMTD1Q96MG8 357 aaPredicted RBP17.23■□□□□ 0.35
TNFSF13-202ENST00000349228 TSG101Q99816 390 aa17.23■□□□□ 0.35
TNFSF13-202ENST00000349228 NHEJ1Q9H9Q4 299 aaPredicted RBP17.23■□□□□ 0.35
TNFSF13-202ENST00000349228 ATP6V0A2Q9Y487 856 aa17.23■□□□□ 0.35
TNFSF13-202ENST00000349228 MYH1P12882 1939 aa17.23■□□□□ 0.35
TNFSF13-202ENST00000349228 CCDC66A2RUB6 948 aa17.23■□□□□ 0.35
TNFSF13-202ENST00000349228 MYMKA6NI61 221 aa17.23■□□□□ 0.35
TNFSF13-202ENST00000349228 PPEF1O14829 653 aaPredicted RBP17.23■□□□□ 0.35
TNFSF13-202ENST00000349228 SASH3O75995 380 aa17.23■□□□□ 0.35
TNFSF13-202ENST00000349228 AKR1B1P15121 316 aa17.23■□□□□ 0.35
TNFSF13-202ENST00000349228 CLK2P49760 499 aaKnown RBP17.23■□□□□ 0.35
TNFSF13-202ENST00000349228 CKAP4Q07065 602 aaKnown RBP17.23■□□□□ 0.35
TNFSF13-202ENST00000349228 MAN2A1Q16706 1144 aa17.23■□□□□ 0.35
TNFSF13-202ENST00000349228 VWA3BQ502W6 1294 aa17.23■□□□□ 0.35
TNFSF13-202ENST00000349228 DPP8Q6V1X1 898 aaPredicted RBP17.23■□□□□ 0.35
TNFSF13-202ENST00000349228 JAKMIP2Q96AA8 810 aa17.23■□□□□ 0.35
TNFSF13-202ENST00000349228 COA7Q96BR5 231 aa17.23■□□□□ 0.35
TNFSF13-202ENST00000349228 SEMA6BQ9H3T3 888 aa17.23■□□□□ 0.35
TNFSF13-202ENST00000349228 ZSWIM4Q9H7M6 989 aa17.23■□□□□ 0.35
TNFSF13-202ENST00000349228 JMJD4Q9H9V9 463 aa17.23■□□□□ 0.35
TNFSF13-202ENST00000349228 ZHX1Q9UKY1 873 aaPredicted RBP17.23■□□□□ 0.35
TNFSF13-202ENST00000349228 FRMPD2Q68DX3 1309 aaPredicted RBP17.22■□□□□ 0.35
TNFSF13-202ENST00000349228 RASSF10A6NK89 507 aa17.22■□□□□ 0.35
TNFSF13-202ENST00000349228 EIF3JO75822 258 aaKnown RBP17.22■□□□□ 0.35
TNFSF13-202ENST00000349228 HLA-DOAP06340 250 aa17.22■□□□□ 0.35
TNFSF13-202ENST00000349228 MCM6Q14566 821 aa17.22■□□□□ 0.35
TNFSF13-202ENST00000349228 BEND6Q5SZJ8 279 aaPredicted RBP17.22■□□□□ 0.35
TNFSF13-202ENST00000349228 MCTP2Q6DN12 878 aa17.22■□□□□ 0.35
TNFSF13-202ENST00000349228 WDR93Q6P2C0 686 aa17.22■□□□□ 0.35
TNFSF13-202ENST00000349228 HHIPL2Q6UWX4 724 aa17.22■□□□□ 0.35
TNFSF13-202ENST00000349228 TXLNBQ8N3L3 684 aa17.22■□□□□ 0.35
TNFSF13-202ENST00000349228 MTMR8Q96EF0 704 aa17.22■□□□□ 0.35
TNFSF13-202ENST00000349228 ZC3H12CQ9C0D7 883 aaKnown RBP17.22■□□□□ 0.35
TNFSF13-202ENST00000349228 NT5C3AQ9H0P0 336 aa17.22■□□□□ 0.35
TNFSF13-202ENST00000349228 SAR1BQ9Y6B6 198 aa17.22■□□□□ 0.35
TNFSF13-202ENST00000349228 POLRMTO00411 1230 aaKnown RBP17.21■□□□□ 0.35
TNFSF13-202ENST00000349228 ABL1P00519 1130 aa17.21■□□□□ 0.35
TNFSF13-202ENST00000349228 SPA17Q15506 151 aa17.21■□□□□ 0.35
TNFSF13-202ENST00000349228 ADGRF4Q8IZF3 695 aa17.21■□□□□ 0.35
TNFSF13-202ENST00000349228 CNPY4Q8N129 248 aa17.21■□□□□ 0.35
TNFSF13-202ENST00000349228 SNX29Q8TEQ0 813 aa17.21■□□□□ 0.35
TNFSF13-202ENST00000349228 EHD4Q9H223 541 aa17.21■□□□□ 0.35
TNFSF13-202ENST00000349228 NDST4Q9H3R1 872 aa17.21■□□□□ 0.35
TNFSF13-202ENST00000349228 SLC39A2Q9NP94 309 aa17.21■□□□□ 0.35
TNFSF13-202ENST00000349228 BMP2KQ9NSY1 1161 aaPredicted RBP17.21■□□□□ 0.35
TNFSF13-202ENST00000349228 AGPAT5Q9NUQ2 364 aa17.21■□□□□ 0.35
TNFSF13-202ENST00000349228 PLAGL2Q9UPG8 496 aa17.21■□□□□ 0.35
TNFSF13-202ENST00000349228 KDM3AQ9Y4C1 1321 aa17.21■□□□□ 0.35
TNFSF13-202ENST00000349228 FOCADQ5VW36 1801 aa17.21■□□□□ 0.35
TNFSF13-202ENST00000349228 ZBTB5O15062 677 aa17.21■□□□□ 0.35
TNFSF13-202ENST00000349228 USO1O60763 962 aaKnown RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms