RNA–Protein interactions for RNA: ENST00000349157.10

PUF60-202, Transcript of poly(U) binding splicing factor 60, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PUF60, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-202ENST00000349157 KLHL10Q6JEL2 608 aa21.9■■□□□ 1.1
PUF60-202ENST00000349157 NELFBQ8WX92 580 aa21.9■■□□□ 1.1
PUF60-202ENST00000349157 LARP4BQ92615 738 aaKnown RBP21.9■■□□□ 1.1
PUF60-202ENST00000349157 LPAR1Q92633 364 aa21.9■■□□□ 1.1
PUF60-202ENST00000349157 STAMQ92783 540 aa21.9■■□□□ 1.1
PUF60-202ENST00000349157 FAM20AQ96MK3 541 aa21.9■■□□□ 1.1
PUF60-202ENST00000349157 MED15Q96RN5 788 aa21.9■■□□□ 1.1
PUF60-202ENST00000349157 MRPL11Q9Y3B7 192 aaKnown RBP21.9■■□□□ 1.1
PUF60-202ENST00000349157 FZD9O00144 591 aa21.9■■□□□ 1.1
PUF60-202ENST00000349157 CASP1P29466 404 aa21.9■■□□□ 1.1
PUF60-202ENST00000349157 ARHGAP4P98171 946 aa21.9■■□□□ 1.1
PUF60-202ENST00000349157 PSMD2Q13200 908 aa21.9■■□□□ 1.1
PUF60-202ENST00000349157 TMEM119Q4V9L6 283 aa21.9■■□□□ 1.1
PUF60-202ENST00000349157 HAUS3Q68CZ6 603 aa21.9■■□□□ 1.1
PUF60-202ENST00000349157 FOXR2Q6PJQ5 311 aa21.9■■□□□ 1.1
PUF60-202ENST00000349157 FCHSD1Q86WN1 690 aa21.9■■□□□ 1.1
PUF60-202ENST00000349157 TRMT44Q8IYL2 757 aaKnown RBP21.9■■□□□ 1.1
PUF60-202ENST00000349157 SAMD3Q8N6K7 520 aa21.9■■□□□ 1.1
PUF60-202ENST00000349157 ERMNQ8TAM6 284 aa21.9■■□□□ 1.1
PUF60-202ENST00000349157 SNX29Q8TEQ0 813 aa21.9■■□□□ 1.1
PUF60-202ENST00000349157 SGIP1Q9BQI5 828 aa21.9■■□□□ 1.1
PUF60-202ENST00000349157 SAMSN1Q9NSI8 373 aaKnown RBP21.9■■□□□ 1.1
PUF60-202ENST00000349157 LIMA1Q9UHB6 759 aaKnown RBP21.9■■□□□ 1.1
PUF60-202ENST00000349157 CTNND2Q9UQB3 1225 aa21.9■■□□□ 1.1
PUF60-202ENST00000349157 ABCB11O95342 1321 aa21.89■■□□□ 1.09
PUF60-202ENST00000349157 PSDA5PKW4 1024 aaPredicted RBP21.89■■□□□ 1.09
PUF60-202ENST00000349157 USP17L15C9J2P7 530 aa21.89■■□□□ 1.09
PUF60-202ENST00000349157 USP17L13C9JLJ4 530 aa21.89■■□□□ 1.09
PUF60-202ENST00000349157 USP17L11C9JVI0 530 aa21.89■■□□□ 1.09
PUF60-202ENST00000349157 USP17L18D6R9N7 530 aa21.89■■□□□ 1.09
PUF60-202ENST00000349157 USP17L22D6RA61 530 aa21.89■■□□□ 1.09
PUF60-202ENST00000349157 USP17L17D6RBQ6 530 aa21.89■■□□□ 1.09
PUF60-202ENST00000349157 USP17L19D6RCP7 530 aa21.89■■□□□ 1.09
PUF60-202ENST00000349157 USP17L20D6RJB6 530 aa21.89■■□□□ 1.09
PUF60-202ENST00000349157 USP17L24Q0WX57 530 aa21.89■■□□□ 1.09
PUF60-202ENST00000349157 GRB10Q13322 594 aa21.89■■□□□ 1.09
PUF60-202ENST00000349157 USP17L6PQ6QN14 398 aa21.89■■□□□ 1.09
PUF60-202ENST00000349157 HAS1Q92839 578 aa21.89■■□□□ 1.09
PUF60-202ENST00000349157 DEFB129Q9H1M3 183 aa21.89■■□□□ 1.09
PUF60-202ENST00000349157 ITIH6Q6UXX5 1313 aa21.88■■□□□ 1.09
PUF60-202ENST00000349157 TBX2Q13207 712 aaPredicted RBP21.88■■□□□ 1.09
PUF60-202ENST00000349157 UNC13DQ70J99 1090 aa21.88■■□□□ 1.09
PUF60-202ENST00000349157 RAD54LQ92698 747 aa21.88■■□□□ 1.09
PUF60-202ENST00000349157 NUP88Q99567 741 aaPredicted RBP21.88■■□□□ 1.09
PUF60-202ENST00000349157 THAP9Q9H5L6 903 aa21.88■■□□□ 1.09
PUF60-202ENST00000349157 BMP2KQ9NSY1 1161 aaPredicted RBP21.88■■□□□ 1.09
PUF60-202ENST00000349157 CTNND1O60716 968 aaKnown RBP21.87■■□□□ 1.09
PUF60-202ENST00000349157 EEF1GP26641 437 aaKnown RBP21.87■■□□□ 1.09
PUF60-202ENST00000349157 PRCPP42785 496 aa21.87■■□□□ 1.09
PUF60-202ENST00000349157 ASIC1P78348 528 aa21.87■■□□□ 1.09
PUF60-202ENST00000349157 RASA3Q14644 834 aa21.87■■□□□ 1.09
PUF60-202ENST00000349157 NBPF9Q3BBW0 867 aa21.87■■□□□ 1.09
PUF60-202ENST00000349157 DCAF15Q66K64 600 aa21.87■■□□□ 1.09
PUF60-202ENST00000349157 ARMCX5Q6P1M9 558 aa21.87■■□□□ 1.09
PUF60-202ENST00000349157 FAM114A1Q8IWE2 563 aa21.87■■□□□ 1.09
PUF60-202ENST00000349157 ADD3Q9UEY8 706 aaKnown RBP21.87■■□□□ 1.09
PUF60-202ENST00000349157 MYH7BA7E2Y1 1941 aa21.87■■□□□ 1.09
PUF60-202ENST00000349157 FDX1P10109 184 aa21.87■■□□□ 1.09
PUF60-202ENST00000349157 ECE1P42892 770 aa21.87■■□□□ 1.09
PUF60-202ENST00000349157 ACER1Q8TDN7 264 aa21.87■■□□□ 1.09
PUF60-202ENST00000349157 PNMA5Q96PV4 448 aa21.87■■□□□ 1.09
PUF60-202ENST00000349157 BCS1LQ9Y276 419 aa21.87■■□□□ 1.09
PUF60-202ENST00000349157 WDR46O15213 610 aaKnown RBP21.86■■□□□ 1.09
PUF60-202ENST00000349157 TPM1P09493 284 aa21.86■■□□□ 1.09
PUF60-202ENST00000349157 PDE4DQ08499 809 aa21.86■■□□□ 1.09
PUF60-202ENST00000349157 TRIM14Q14142 442 aa21.86■■□□□ 1.09
PUF60-202ENST00000349157 FAM83BQ5T0W9 1011 aa21.86■■□□□ 1.09
PUF60-202ENST00000349157 TMX1Q9H3N1 280 aa21.86■■□□□ 1.09
PUF60-202ENST00000349157 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.86■■□□□ 1.097e-7■□□□□ 10.3
PUF60-202ENST00000349157 SMYD4Q8IYR2 804 aaPredicted RBP21.85■■□□□ 1.09
PUF60-202ENST00000349157 BLOC1S4Q9NUP1 217 aa21.85■■□□□ 1.09
PUF60-202ENST00000349157 MAP3K20Q9NYL2 800 aaKnown RBP21.85■■□□□ 1.09
PUF60-202ENST00000349157 R3HCC1Q9Y3T6 440 aaKnown RBP21.85■■□□□ 1.09
PUF60-202ENST00000349157 PHF20L1A8MW92 1017 aa21.85■■□□□ 1.09
PUF60-202ENST00000349157 GCOM1H8Y6P7 765 aaPredicted RBP21.85■■□□□ 1.09
PUF60-202ENST00000349157 FGFR1OPO95684 399 aaKnown RBP21.85■■□□□ 1.09
PUF60-202ENST00000349157 POLR2MP0CAP2 368 aa21.85■■□□□ 1.09
PUF60-202ENST00000349157 CCNE1P24864 410 aa21.85■■□□□ 1.09
PUF60-202ENST00000349157 STX17P56962 302 aa21.85■■□□□ 1.09
PUF60-202ENST00000349157 USH1GQ495M9 461 aa21.85■■□□□ 1.09
PUF60-202ENST00000349157 APTXQ7Z2E3 356 aaKnown RBP21.85■■□□□ 1.09
PUF60-202ENST00000349157 CCDC51Q96ER9 411 aa21.85■■□□□ 1.09
PUF60-202ENST00000349157 NAA15Q9BXJ9 866 aaKnown RBP21.85■■□□□ 1.09
PUF60-202ENST00000349157 KIAA1683Q9H0B3 1180 aa21.85■■□□□ 1.09
PUF60-202ENST00000349157 INTS13Q9NVM9 706 aa21.85■■□□□ 1.09
PUF60-202ENST00000349157 PAXBP1Q9Y5B6 917 aa21.85■■□□□ 1.09
PUF60-202ENST00000349157 USP14P54578 494 aa21.84■■□□□ 1.09
PUF60-202ENST00000349157 APOBEC3FQ8IUX4 373 aaKnown RBP21.84■■□□□ 1.09
PUF60-202ENST00000349157 SPICE1Q8N0Z3 855 aa21.84■■□□□ 1.09
PUF60-202ENST00000349157 TEPSINQ96N21 525 aa21.84■■□□□ 1.09
PUF60-202ENST00000349157 FEZ1Q99689 392 aa21.84■■□□□ 1.09
PUF60-202ENST00000349157 MAGEC2Q9UBF1 373 aaPredicted RBP21.84■■□□□ 1.09
PUF60-202ENST00000349157 GDAQ9Y2T3 454 aa21.84■■□□□ 1.09
PUF60-202ENST00000349157 PPP2R3BQ9Y5P8 575 aa21.84■■□□□ 1.09
PUF60-202ENST00000349157 POTEMA6NI47 508 aa21.83■■□□□ 1.09
PUF60-202ENST00000349157 ARHGAP6O43182 974 aa21.83■■□□□ 1.09
PUF60-202ENST00000349157 STX10O60499 249 aa21.83■■□□□ 1.09
PUF60-202ENST00000349157 KIF20AO95235 890 aa21.83■■□□□ 1.09
PUF60-202ENST00000349157 TCP11X2Q5H9J9 407 aa21.83■■□□□ 1.09
PUF60-202ENST00000349157 MIGA2Q7L4E1 593 aa21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms