RNA–Protein interactions for RNA: ENST00000348990.9

APP-202, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,355 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-202ENST00000348990 AMPD3Q01432 767 aa19.7■□□□□ 0.74
APP-202ENST00000348990 TUBB8Q3ZCM7 444 aa19.7■□□□□ 0.74
APP-202ENST00000348990 CCDC40Q4G0X9 1142 aa19.7■□□□□ 0.74
APP-202ENST00000348990 VWA3BQ502W6 1294 aa19.7■□□□□ 0.74
APP-202ENST00000348990 EPN3Q9H201 632 aa19.7■□□□□ 0.74
APP-202ENST00000348990 TNS3Q68CZ2 1445 aa19.7■□□□□ 0.74
APP-202ENST00000348990 NID2Q14112 1375 aa19.7■□□□□ 0.74
APP-202ENST00000348990 ZNF233A6NK53 670 aa19.7■□□□□ 0.74
APP-202ENST00000348990 PALMO75781 387 aa19.7■□□□□ 0.74
APP-202ENST00000348990 CCDC172P0C7W6 258 aa19.7■□□□□ 0.74
APP-202ENST00000348990 TXKP42681 527 aa19.7■□□□□ 0.74
APP-202ENST00000348990 CCDC152Q4G0S7 254 aa19.7■□□□□ 0.74
APP-202ENST00000348990 NLRP14Q86W24 1093 aa19.7■□□□□ 0.74
APP-202ENST00000348990 OR2W6PQ8NHA6 318 aa19.7■□□□□ 0.74
APP-202ENST00000348990 TLR10Q9BXR5 811 aa19.7■□□□□ 0.74
APP-202ENST00000348990 TRIM9Q9C026 710 aa19.7■□□□□ 0.74
APP-202ENST00000348990 PLAAQ9Y263 795 aa19.7■□□□□ 0.74
APP-202ENST00000348990 SUSD4Q5VX71 490 aa19.69■□□□□ 0.74
APP-202ENST00000348990 CALML4Q96GE6 196 aa19.69■□□□□ 0.74
APP-202ENST00000348990 KANSL2Q9H9L4 492 aa19.69■□□□□ 0.74
APP-202ENST00000348990 MCM9Q9NXL9 1143 aa19.69■□□□□ 0.74
APP-202ENST00000348990 C1orf167Q5SNV9 1468 aa19.69■□□□□ 0.74
APP-202ENST00000348990 CAVIN4Q5BKX8 364 aa19.69■□□□□ 0.74
APP-202ENST00000348990 MIIPQ5JXC2 388 aa19.69■□□□□ 0.74
APP-202ENST00000348990 CNNM4Q6P4Q7 775 aa19.69■□□□□ 0.74
APP-202ENST00000348990 TFAP4Q01664 338 aa19.69■□□□□ 0.74
APP-202ENST00000348990 CCDC84Q86UT8 332 aaPredicted RBP19.69■□□□□ 0.74
APP-202ENST00000348990 PURBQ96QR8 312 aaKnown RBP19.69■□□□□ 0.74
APP-202ENST00000348990 MKNK2Q9HBH9 465 aa19.69■□□□□ 0.74
APP-202ENST00000348990 KBTBD4Q9NVX7 518 aa19.69■□□□□ 0.74
APP-202ENST00000348990 MARCH6O60337 910 aa19.68■□□□□ 0.74
APP-202ENST00000348990 RAPGEF1Q13905 1077 aa19.68■□□□□ 0.74
APP-202ENST00000348990 UBLCP1Q8WVY7 318 aaPredicted RBP19.68■□□□□ 0.74
APP-202ENST00000348990 UIMC1Q96RL1 719 aa19.68■□□□□ 0.74
APP-202ENST00000348990 LUC7LQ9NQ29 371 aaKnown RBP19.68■□□□□ 0.74
APP-202ENST00000348990 EPS15P42566 896 aa19.68■□□□□ 0.74
APP-202ENST00000348990 SKOR1P84550 965 aa19.68■□□□□ 0.74
APP-202ENST00000348990 CNPY4Q8N129 248 aa19.68■□□□□ 0.74
APP-202ENST00000348990 PNMA1Q8ND90 353 aa19.68■□□□□ 0.74
APP-202ENST00000348990 ERGIC2Q96RQ1 377 aa19.68■□□□□ 0.74
APP-202ENST00000348990 TMCO5BA8MYB1 307 aa19.67■□□□□ 0.74
APP-202ENST00000348990 NAPAP54920 295 aa19.67■□□□□ 0.74
APP-202ENST00000348990 PTGISQ16647 500 aa19.67■□□□□ 0.74
APP-202ENST00000348990 ZNF662Q6ZS27 426 aa19.67■□□□□ 0.74
APP-202ENST00000348990 C4orf32Q8N8J7 132 aa19.67■□□□□ 0.74
APP-202ENST00000348990 AKAP11Q9UKA4 1901 aa19.67■□□□□ 0.74
APP-202ENST00000348990 MYH7P12883 1935 aa19.67■□□□□ 0.74
APP-202ENST00000348990 NF2P35240 595 aa19.67■□□□□ 0.74
APP-202ENST00000348990 GCOM1H8Y6P7 765 aaPredicted RBP19.67■□□□□ 0.74
APP-202ENST00000348990 MYZAPP0CAP1 466 aa19.67■□□□□ 0.74
APP-202ENST00000348990 MDH1P40925 334 aaKnown RBP19.67■□□□□ 0.74
APP-202ENST00000348990 KIAA0753Q2KHM9 967 aa19.67■□□□□ 0.74
APP-202ENST00000348990 SLC9C1Q4G0N8 1177 aa19.67■□□□□ 0.74
APP-202ENST00000348990 SV2BQ7L1I2 683 aa19.67■□□□□ 0.74
APP-202ENST00000348990 PRPF38AQ8NAV1 312 aaKnown RBP19.67■□□□□ 0.74
APP-202ENST00000348990 MYCBPAPQ8TBZ2 947 aa19.67■□□□□ 0.74
APP-202ENST00000348990 ATP6V1G3Q96LB4 118 aa19.67■□□□□ 0.74
APP-202ENST00000348990 ZHX3Q9H4I2 956 aa19.67■□□□□ 0.74
APP-202ENST00000348990 TBC1D7Q9P0N9 293 aa19.67■□□□□ 0.74
APP-202ENST00000348990 EPB41L3Q9Y2J2 1087 aaPredicted RBP19.67■□□□□ 0.74
APP-202ENST00000348990 KCNK3O14649 394 aa19.66■□□□□ 0.74
APP-202ENST00000348990 POLR2FP61218 127 aaKnown RBP19.66■□□□□ 0.74
APP-202ENST00000348990 E2F5Q15329 346 aa19.66■□□□□ 0.74
APP-202ENST00000348990 KLHDC7AQ5VTJ3 777 aa19.66■□□□□ 0.74
APP-202ENST00000348990 CASKIN2Q8WXE0 1202 aa19.66■□□□□ 0.74
APP-202ENST00000348990 TBC1D5Q92609 795 aa19.66■□□□□ 0.74
APP-202ENST00000348990 CRNKL1Q9BZJ0 848 aaKnown RBP19.66■□□□□ 0.74
APP-202ENST00000348990 SEMA6BQ9H3T3 888 aa19.66■□□□□ 0.74
APP-202ENST00000348990 KLC4Q9NSK0 619 aa19.66■□□□□ 0.74
APP-202ENST00000348990 TRAF5O00463 557 aa19.66■□□□□ 0.74
APP-202ENST00000348990 CEP104O60308 925 aa19.66■□□□□ 0.74
APP-202ENST00000348990 EPB41P11171 864 aaKnown RBP19.66■□□□□ 0.74
APP-202ENST00000348990 CTNNA1P35221 906 aaKnown RBP19.66■□□□□ 0.74
APP-202ENST00000348990 CAVIN3Q969G5 261 aa19.66■□□□□ 0.74
APP-202ENST00000348990 GOLPH3Q9H4A6 298 aa19.66■□□□□ 0.74
APP-202ENST00000348990 ANAPC4Q9UJX5 808 aa19.66■□□□□ 0.74
APP-202ENST00000348990 TMOD1P28289 359 aa19.66■□□□□ 0.74
APP-202ENST00000348990 DDX42Q86XP3 938 aaKnown RBP eCLIP19.66■□□□□ 0.74
APP-202ENST00000348990 RIOK1Q9BRS2 568 aaKnown RBP19.66■□□□□ 0.74
APP-202ENST00000348990 PCDHA6Q9UN73 950 aa19.66■□□□□ 0.74
APP-202ENST00000348990 PCDHA8Q9Y5H6 950 aa19.66■□□□□ 0.74
APP-202ENST00000348990 OR52Z1P0C646 297 aa19.65■□□□□ 0.74
APP-202ENST00000348990 TNNC1P63316 161 aa19.65■□□□□ 0.74
APP-202ENST00000348990 MAN2A1Q16706 1144 aa19.65■□□□□ 0.74
APP-202ENST00000348990 KDM7AQ6ZMT4 941 aa19.65■□□□□ 0.74
APP-202ENST00000348990 SPATS2Q86XZ4 545 aaKnown RBP19.65■□□□□ 0.74
APP-202ENST00000348990 LRRC15Q8TF66 581 aa19.65■□□□□ 0.74
APP-202ENST00000348990 ADAMTS1Q9UHI8 967 aa19.65■□□□□ 0.74
APP-202ENST00000348990 FGFR1OPO95684 399 aaKnown RBP19.65■□□□□ 0.74
APP-202ENST00000348990 PRLRP16471 622 aa19.65■□□□□ 0.74
APP-202ENST00000348990 SOGA3Q5TF21 947 aa19.65■□□□□ 0.74
APP-202ENST00000348990 CPLX4Q7Z7G2 160 aa19.65■□□□□ 0.74
APP-202ENST00000348990 CCDC13Q8IYE1 715 aa19.65■□□□□ 0.74
APP-202ENST00000348990 TSG101Q99816 390 aa19.65■□□□□ 0.74
APP-202ENST00000348990 CCSER1Q9C0I3 900 aa19.65■□□□□ 0.74
APP-202ENST00000348990 NIP7Q9Y221 180 aaKnown RBP eCLIP19.65■□□□□ 0.74
APP-202ENST00000348990 TULP1O00294 542 aaPredicted RBP19.64■□□□□ 0.74
APP-202ENST00000348990 SFMBT2Q5VUG0 894 aa19.64■□□□□ 0.74
APP-202ENST00000348990 IQCKQ8N0W5 287 aa19.64■□□□□ 0.74
APP-202ENST00000348990 ARFGAP2Q8N6H7 521 aa19.64■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 950 ms