RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 MOCS3O95396 460 aa16.23■□□□□ 0.19
NUP50-201ENST00000347635 UBL4BQ8N7F7 174 aa16.23■□□□□ 0.19
NUP50-201ENST00000347635 MARCH10Q8NA82 808 aaPredicted RBP16.23■□□□□ 0.19
NUP50-201ENST00000347635 KCNK9Q9NPC2 374 aa16.23■□□□□ 0.19
NUP50-201ENST00000347635 A0A1B0GTH6 734 aa16.22■□□□□ 0.19
NUP50-201ENST00000347635 MYO1CO00159 1063 aa16.22■□□□□ 0.19
NUP50-201ENST00000347635 PPARDQ03181 441 aa16.22■□□□□ 0.19
NUP50-201ENST00000347635 CERKLQ49MI3 558 aaPredicted RBP16.22■□□□□ 0.19
NUP50-201ENST00000347635 TMTC3Q6ZXV5 915 aa16.22■□□□□ 0.19
NUP50-201ENST00000347635 CLUL1Q15846 466 aa16.22■□□□□ 0.19
NUP50-201ENST00000347635 MAN2A1Q16706 1144 aa16.22■□□□□ 0.19
NUP50-201ENST00000347635 PIM2Q9P1W9 311 aa16.22■□□□□ 0.19
NUP50-201ENST00000347635 MYO3BQ8WXR4 1341 aa16.22■□□□□ 0.19
NUP50-201ENST00000347635 KCNQ2O43526 872 aa16.22■□□□□ 0.19
NUP50-201ENST00000347635 KRT71Q3SY84 523 aa16.22■□□□□ 0.19
NUP50-201ENST00000347635 GPBP1Q86WP2 473 aa16.22■□□□□ 0.19
NUP50-201ENST00000347635 PLCB1Q9NQ66 1216 aa16.22■□□□□ 0.19
NUP50-201ENST00000347635 LGALS16A8MUM7 142 aa16.22■□□□□ 0.19
NUP50-201ENST00000347635 PABPC4Q13310 644 aaKnown RBP eCLIP16.22■□□□□ 0.19
NUP50-201ENST00000347635 KCTD16Q68DU8 428 aa16.22■□□□□ 0.19
NUP50-201ENST00000347635 DCPSQ96C86 337 aaKnown RBP16.22■□□□□ 0.19
NUP50-201ENST00000347635 PCDHA13Q9Y5I0 950 aa16.22■□□□□ 0.19
NUP50-201ENST00000347635 ATP5DP30049 168 aa16.22■□□□□ 0.19
NUP50-201ENST00000347635 GUCY1A2P33402 732 aa16.22■□□□□ 0.19
NUP50-201ENST00000347635 CROCCP2Q86T23 111 aa16.22■□□□□ 0.19
NUP50-201ENST00000347635 LARP4BQ92615 738 aaKnown RBP16.22■□□□□ 0.19
NUP50-201ENST00000347635 BICD1Q96G01 975 aa16.22■□□□□ 0.19
NUP50-201ENST00000347635 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.22■□□□□ 0.19
NUP50-201ENST00000347635 TBC1D9BQ66K14 1250 aa16.21■□□□□ 0.19
NUP50-201ENST00000347635 RAB17Q9H0T7 212 aa16.21■□□□□ 0.19
NUP50-201ENST00000347635 HPS5Q9UPZ3 1129 aa16.21■□□□□ 0.19
NUP50-201ENST00000347635 ATP6V0A2Q9Y487 856 aa16.21■□□□□ 0.19
NUP50-201ENST00000347635 KRIT1O00522 736 aa16.21■□□□□ 0.19
NUP50-201ENST00000347635 CYP27A1Q02318 531 aa16.21■□□□□ 0.19
NUP50-201ENST00000347635 TC2NQ8N9U0 490 aa16.21■□□□□ 0.19
NUP50-201ENST00000347635 UIMC1Q96RL1 719 aa16.21■□□□□ 0.19
NUP50-201ENST00000347635 KRT12Q99456 494 aa16.21■□□□□ 0.19
NUP50-201ENST00000347635 FAM184BQ9ULE4 1060 aa16.21■□□□□ 0.19
NUP50-201ENST00000347635 CNTNAP4Q9C0A0 1308 aa16.21■□□□□ 0.19
NUP50-201ENST00000347635 USP17L3A6NCW0 530 aa16.21■□□□□ 0.19
NUP50-201ENST00000347635 USP17L4A6NCW7 530 aa16.21■□□□□ 0.19
NUP50-201ENST00000347635 GSTA5Q7RTV2 222 aa16.21■□□□□ 0.19
NUP50-201ENST00000347635 USP17L1Q7RTZ2 530 aa16.21■□□□□ 0.19
NUP50-201ENST00000347635 BRIP1Q9BX63 1249 aa16.21■□□□□ 0.19
NUP50-201ENST00000347635 XRCC5P13010 732 aaKnown RBP16.21■□□□□ 0.18
NUP50-201ENST00000347635 SCNN1DP51172 638 aa16.21■□□□□ 0.18
NUP50-201ENST00000347635 RSRC1Q96IZ7 334 aaKnown RBP16.21■□□□□ 0.18
NUP50-201ENST00000347635 AMFRQ9UKV5 643 aa16.21■□□□□ 0.18
NUP50-201ENST00000347635 EIF4A3P38919 411 aaKnown RBP16.2■□□□□ 0.18
NUP50-201ENST00000347635 EHHADHQ08426 723 aa16.2■□□□□ 0.18
NUP50-201ENST00000347635 SULF1Q8IWU6 871 aa16.2■□□□□ 0.18
NUP50-201ENST00000347635 MRPL44Q9H9J2 332 aaKnown RBP16.2■□□□□ 0.18
NUP50-201ENST00000347635 A0A087WUV0 522 aaPredicted RBP16.2■□□□□ 0.18
NUP50-201ENST00000347635 TRIM49BA6NDI0 452 aa16.2■□□□□ 0.18
NUP50-201ENST00000347635 SPOPO43791 374 aa16.2■□□□□ 0.18
NUP50-201ENST00000347635 SRGAP2O75044 1071 aa16.2■□□□□ 0.18
NUP50-201ENST00000347635 GCNT3O95395 438 aa16.2■□□□□ 0.18
NUP50-201ENST00000347635 PLCG1P19174 1290 aa16.2■□□□□ 0.18
NUP50-201ENST00000347635 CXCR5P32302 372 aa16.2■□□□□ 0.18
NUP50-201ENST00000347635 FAM26FQ5R3K3 315 aa16.2■□□□□ 0.18
NUP50-201ENST00000347635 SYNE4Q8N205 404 aa16.2■□□□□ 0.18
NUP50-201ENST00000347635 FRMPD2Q68DX3 1309 aaPredicted RBP16.2■□□□□ 0.18
NUP50-201ENST00000347635 GSG1L2A8MUP6 293 aa16.2■□□□□ 0.18
NUP50-201ENST00000347635 HEXIM1O94992 359 aaKnown RBP16.2■□□□□ 0.18
NUP50-201ENST00000347635 NR1I3Q14994 352 aa16.2■□□□□ 0.18
NUP50-201ENST00000347635 IGDCC4Q8TDY8 1250 aa16.2■□□□□ 0.18
NUP50-201ENST00000347635 SH3GLB2Q9NR46 395 aa16.2■□□□□ 0.18
NUP50-201ENST00000347635 PRCPP42785 496 aa16.2■□□□□ 0.18
NUP50-201ENST00000347635 KIF11P52732 1056 aa16.2■□□□□ 0.18
NUP50-201ENST00000347635 U2AF1L4Q8WU68 220 aaKnown RBP16.2■□□□□ 0.18
NUP50-201ENST00000347635 IVNS1ABPQ9Y6Y0 642 aa16.2■□□□□ 0.18
NUP50-201ENST00000347635 IRX2Q9BZI1 471 aaPredicted RBP16.19■□□□□ 0.18
NUP50-201ENST00000347635 EPB41L5Q9HCM4 733 aa16.19■□□□□ 0.18
NUP50-201ENST00000347635 DDX25Q9UHL0 483 aaKnown RBP16.19■□□□□ 0.18
NUP50-201ENST00000347635 MINPP1Q9UNW1 487 aa16.19■□□□□ 0.18
NUP50-201ENST00000347635 ALS2CLQ60I27 953 aa16.19■□□□□ 0.18
NUP50-201ENST00000347635 PODNQ7Z5L7 613 aa16.19■□□□□ 0.18
NUP50-201ENST00000347635 ENAHQ8N8S7 591 aaPredicted RBP16.19■□□□□ 0.18
NUP50-201ENST00000347635 CTTNBP2NLQ9P2B4 639 aa16.19■□□□□ 0.18
NUP50-201ENST00000347635 RNF14Q9UBS8 474 aa16.19■□□□□ 0.18
NUP50-201ENST00000347635 PCDHA12Q9UN75 941 aa16.19■□□□□ 0.18
NUP50-201ENST00000347635 TAOK1Q7L7X3 1001 aa16.19■□□□□ 0.18
NUP50-201ENST00000347635 ANO9A1A5B4 782 aa16.19■□□□□ 0.18
NUP50-201ENST00000347635 CHMP2AO43633 222 aa16.19■□□□□ 0.18
NUP50-201ENST00000347635 BRDTQ58F21 947 aaPredicted RBP16.19■□□□□ 0.18
NUP50-201ENST00000347635 ARMCX3Q9UH62 379 aaPredicted RBP16.19■□□□□ 0.18
NUP50-201ENST00000347635 H2AFXP16104 143 aaPredicted RBP16.18■□□□□ 0.18
NUP50-201ENST00000347635 ADAM9Q13443 819 aa16.18■□□□□ 0.18
NUP50-201ENST00000347635 SUPT20HL1Q3ZLR7 823 aa16.18■□□□□ 0.18
NUP50-201ENST00000347635 DENND2CQ68D51 928 aa16.18■□□□□ 0.18
NUP50-201ENST00000347635 REXO1L1PQ8IX06 675 aa16.18■□□□□ 0.18
NUP50-201ENST00000347635 RIC8AQ9NPQ8 531 aa16.18■□□□□ 0.18
NUP50-201ENST00000347635 GJC1P36383 396 aa16.18■□□□□ 0.18
NUP50-201ENST00000347635 STK17AQ9UEE5 414 aa16.18■□□□□ 0.18
NUP50-201ENST00000347635 EEF2P13639 858 aaKnown RBP16.18■□□□□ 0.18
NUP50-201ENST00000347635 PFKFB3Q16875 520 aaPredicted RBP16.18■□□□□ 0.18
NUP50-201ENST00000347635 GPATCH4Q5T3I0 446 aaKnown RBP16.18■□□□□ 0.18
NUP50-201ENST00000347635 ELOA2Q8IYF1 753 aaPredicted RBP16.18■□□□□ 0.18
NUP50-201ENST00000347635 ZNF34Q8IZ26 560 aa16.18■□□□□ 0.18
NUP50-201ENST00000347635 NDST4Q9H3R1 872 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms