RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 PP2D1A8MPX8 630 aa24.24■■□□□ 1.47
TSPAN3-202ENST00000346495 BIN1O00499 593 aa24.24■■□□□ 1.47
TSPAN3-202ENST00000346495 DSG3P32926 999 aa24.24■■□□□ 1.47
TSPAN3-202ENST00000346495 STAT6P42226 847 aa24.24■■□□□ 1.47
TSPAN3-202ENST00000346495 CCDC173Q0VFZ6 552 aa24.24■■□□□ 1.47
TSPAN3-202ENST00000346495 TTLL12Q14166 644 aaPredicted RBP24.24■■□□□ 1.47
TSPAN3-202ENST00000346495 COG2Q14746 738 aa24.24■■□□□ 1.47
TSPAN3-202ENST00000346495 KARSQ15046 597 aaKnown RBP24.24■■□□□ 1.47
TSPAN3-202ENST00000346495 Q4G0T1 1027 aa24.24■■□□□ 1.47
TSPAN3-202ENST00000346495 NT5DC1Q5TFE4 455 aa24.24■■□□□ 1.47
TSPAN3-202ENST00000346495 CATSPERGQ6ZRH7 1159 aa24.24■■□□□ 1.47
TSPAN3-202ENST00000346495 RASSF8Q8NHQ8 419 aa24.24■■□□□ 1.47
TSPAN3-202ENST00000346495 SMARCE1Q969G3 411 aa24.24■■□□□ 1.47
TSPAN3-202ENST00000346495 ATG4CQ96DT6 458 aa24.24■■□□□ 1.47
TSPAN3-202ENST00000346495 SMC2O95347 1197 aa24.23■■□□□ 1.47
TSPAN3-202ENST00000346495 PRR29P0C7W0 189 aa24.23■■□□□ 1.47
TSPAN3-202ENST00000346495 ALAS1P13196 640 aa24.23■■□□□ 1.47
TSPAN3-202ENST00000346495 HSD17B4P51659 736 aa24.23■■□□□ 1.47
TSPAN3-202ENST00000346495 GHRHRQ02643 423 aa24.23■■□□□ 1.47
TSPAN3-202ENST00000346495 PPATQ06203 517 aa24.23■■□□□ 1.47
TSPAN3-202ENST00000346495 RRAGBQ5VZM2 374 aa24.23■■□□□ 1.47
TSPAN3-202ENST00000346495 PDXDC2PQ6P474 469 aa24.23■■□□□ 1.47
TSPAN3-202ENST00000346495 CLEC4DQ8WXI8 215 aa24.23■■□□□ 1.47
TSPAN3-202ENST00000346495 HAS1Q92839 578 aa24.23■■□□□ 1.47
TSPAN3-202ENST00000346495 MAP3K20Q9NYL2 800 aaKnown RBP24.23■■□□□ 1.47
TSPAN3-202ENST00000346495 A0A087WWV3 80 aa24.22■■□□□ 1.47
TSPAN3-202ENST00000346495 SARSP49591 514 aaKnown RBP24.22■■□□□ 1.47
TSPAN3-202ENST00000346495 OAZ1P54368 228 aa24.22■■□□□ 1.47
TSPAN3-202ENST00000346495 ARMC9Q7Z3E5 817 aa24.22■■□□□ 1.47
TSPAN3-202ENST00000346495 LUZP1Q86V48 1076 aa24.22■■□□□ 1.47
TSPAN3-202ENST00000346495 ERO1BQ86YB8 467 aa24.22■■□□□ 1.47
TSPAN3-202ENST00000346495 SLFN12Q8IYM2 578 aa24.22■■□□□ 1.47
TSPAN3-202ENST00000346495 GRAMD1CQ8IYS0 662 aa24.22■■□□□ 1.47
TSPAN3-202ENST00000346495 TTC12Q9H892 705 aaPredicted RBP24.22■■□□□ 1.47
TSPAN3-202ENST00000346495 KCNMB3Q9NPA1 279 aa24.22■■□□□ 1.47
TSPAN3-202ENST00000346495 LRWD1Q9UFC0 647 aa24.22■■□□□ 1.47
TSPAN3-202ENST00000346495 ADAMTS5Q9UNA0 930 aa24.22■■□□□ 1.47
TSPAN3-202ENST00000346495 MYPNQ86TC9 1320 aa24.22■■□□□ 1.47
TSPAN3-202ENST00000346495 COL11A1P12107 1806 aaPredicted RBP24.22■■□□□ 1.47
TSPAN3-202ENST00000346495 TBX3O15119 743 aa24.21■■□□□ 1.47
TSPAN3-202ENST00000346495 AFMP43652 599 aa24.21■■□□□ 1.47
TSPAN3-202ENST00000346495 DPCR1Q3MIW9 517 aa24.21■■□□□ 1.47
TSPAN3-202ENST00000346495 TRIML1Q8N9V2 468 aa24.21■■□□□ 1.47
TSPAN3-202ENST00000346495 BPIFA3Q9BQP9 254 aa24.21■■□□□ 1.47
TSPAN3-202ENST00000346495 CUEDC2Q9H467 287 aa24.21■■□□□ 1.47
TSPAN3-202ENST00000346495 ELP3Q9H9T3 547 aa24.21■■□□□ 1.47
TSPAN3-202ENST00000346495 CLEC11AQ9Y240 323 aa24.21■■□□□ 1.47
TSPAN3-202ENST00000346495 LOC285556D6RIA3 1793 aa24.21■■□□□ 1.47
TSPAN3-202ENST00000346495 ZNF76P36508 570 aa24.21■■□□□ 1.47
TSPAN3-202ENST00000346495 IQCB1Q15051 598 aa24.21■■□□□ 1.47
TSPAN3-202ENST00000346495 SPATA20Q8TB22 786 aa24.21■■□□□ 1.47
TSPAN3-202ENST00000346495 CALML4Q96GE6 196 aa24.21■■□□□ 1.47
TSPAN3-202ENST00000346495 PPP1R9BQ96SB3 815 aa24.21■■□□□ 1.47
TSPAN3-202ENST00000346495 MAGEF1Q9HAY2 307 aa24.21■■□□□ 1.47
TSPAN3-202ENST00000346495 HOXC10Q9NYD6 342 aa24.21■■□□□ 1.47
TSPAN3-202ENST00000346495 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.21■■□□□ 1.47
TSPAN3-202ENST00000346495 PCDHA12Q9UN75 941 aa24.21■■□□□ 1.47
TSPAN3-202ENST00000346495 RABGAP1Q9Y3P9 1069 aa24.21■■□□□ 1.47
TSPAN3-202ENST00000346495 UTRNP46939 3433 aa24.2■■□□□ 1.47
TSPAN3-202ENST00000346495 SPDYE5A6NIY4 337 aa24.2■■□□□ 1.46
TSPAN3-202ENST00000346495 PRR16Q569H4 304 aa24.2■■□□□ 1.46
TSPAN3-202ENST00000346495 REPS2Q8NFH8 660 aa24.2■■□□□ 1.46
TSPAN3-202ENST00000346495 MAN1B1Q9UKM7 699 aa24.2■■□□□ 1.46
TSPAN3-202ENST00000346495 NFIBO00712 420 aa24.19■■□□□ 1.46
TSPAN3-202ENST00000346495 DPYDQ12882 1025 aa24.19■■□□□ 1.46
TSPAN3-202ENST00000346495 CNKSR2Q8WXI2 1034 aa24.19■■□□□ 1.46
TSPAN3-202ENST00000346495 MMTAG2Q9BU76 263 aaKnown RBP24.19■■□□□ 1.46
TSPAN3-202ENST00000346495 GOLGA6L19H0YKK7 550 aa24.18■■□□□ 1.46
TSPAN3-202ENST00000346495 CXCL11O14625 94 aa24.18■■□□□ 1.46
TSPAN3-202ENST00000346495 GTPBP6O43824 516 aaPredicted RBP24.18■■□□□ 1.46
TSPAN3-202ENST00000346495 ISM2Q6H9L7 571 aa24.18■■□□□ 1.46
TSPAN3-202ENST00000346495 MOB2Q70IA6 237 aa24.18■■□□□ 1.46
TSPAN3-202ENST00000346495 OTUD5Q96G74 571 aa24.18■■□□□ 1.46
TSPAN3-202ENST00000346495 CLMNQ96JQ2 1002 aa24.18■■□□□ 1.46
TSPAN3-202ENST00000346495 FAM20AQ96MK3 541 aa24.18■■□□□ 1.46
TSPAN3-202ENST00000346495 TRERF1Q96PN7 1200 aa24.18■■□□□ 1.46
TSPAN3-202ENST00000346495 BECN2A8MW95 431 aa24.17■■□□□ 1.46
TSPAN3-202ENST00000346495 FAM86B1E9PN63 330 aa24.17■■□□□ 1.46
TSPAN3-202ENST00000346495 ATP2A1O14983 1001 aa24.17■■□□□ 1.46
TSPAN3-202ENST00000346495 FAM86B2P0C5J1 330 aa24.17■■□□□ 1.46
TSPAN3-202ENST00000346495 PLCG1P19174 1290 aa24.17■■□□□ 1.46
TSPAN3-202ENST00000346495 NAALADL2Q58DX5 795 aa24.17■■□□□ 1.46
TSPAN3-202ENST00000346495 MUM1L1Q5H9M0 696 aa24.17■■□□□ 1.46
TSPAN3-202ENST00000346495 KRT79Q5XKE5 535 aa24.17■■□□□ 1.46
TSPAN3-202ENST00000346495 PROCA1Q8NCQ7 364 aaPredicted RBP24.17■■□□□ 1.46
TSPAN3-202ENST00000346495 ETNPPLQ8TBG4 499 aa24.17■■□□□ 1.46
TSPAN3-202ENST00000346495 LENG9Q96B70 501 aa24.17■■□□□ 1.46
TSPAN3-202ENST00000346495 WNK4Q96J92 1243 aa24.17■■□□□ 1.46
TSPAN3-202ENST00000346495 GSDMAQ96QA5 445 aa24.17■■□□□ 1.46
TSPAN3-202ENST00000346495 HOMER2Q9NSB8 354 aa24.17■■□□□ 1.46
TSPAN3-202ENST00000346495 A0A0G2JLL6 359 aaPredicted RBP24.17■■□□□ 1.46
TSPAN3-202ENST00000346495 POTEMA6NI47 508 aa24.17■■□□□ 1.46
TSPAN3-202ENST00000346495 SLC26A4O43511 780 aa24.17■■□□□ 1.46
TSPAN3-202ENST00000346495 MYL1P05976 194 aa24.17■■□□□ 1.46
TSPAN3-202ENST00000346495 PPIL2Q13356 520 aa24.17■■□□□ 1.46
TSPAN3-202ENST00000346495 MORC3Q14149 939 aa24.17■■□□□ 1.46
TSPAN3-202ENST00000346495 PRRT2Q7Z6L0 340 aaPredicted RBP24.17■■□□□ 1.46
TSPAN3-202ENST00000346495 PDLIM2Q96JY6 352 aa24.17■■□□□ 1.46
TSPAN3-202ENST00000346495 IRF6O14896 467 aa24.16■■□□□ 1.46
TSPAN3-202ENST00000346495 TKFCQ3LXA3 575 aa24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms