RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 MYH6P13533 1939 aa18.63■□□□□ 0.57
RAB5C-201ENST00000346213 EIF2AK2P19525 551 aaKnown RBP18.63■□□□□ 0.57
RAB5C-201ENST00000346213 FXR1P51114 621 aaKnown RBP eCLIP18.63■□□□□ 0.57
RAB5C-201ENST00000346213 NFXL1Q6ZNB6 911 aa18.63■□□□□ 0.57
RAB5C-201ENST00000346213 TMTC3Q6ZXV5 915 aa18.63■□□□□ 0.57
RAB5C-201ENST00000346213 DHX32Q7L7V1 743 aaKnown RBP18.63■□□□□ 0.57
RAB5C-201ENST00000346213 MAP3K14Q99558 947 aa18.63■□□□□ 0.57
RAB5C-201ENST00000346213 KIF2CQ99661 725 aa18.63■□□□□ 0.57
RAB5C-201ENST00000346213 MRPL11Q9Y3B7 192 aaKnown RBP18.63■□□□□ 0.57
RAB5C-201ENST00000346213 PNMA6FA0A0J9YX94 578 aa18.62■□□□□ 0.57
RAB5C-201ENST00000346213 SOX1O00570 391 aaPredicted RBP18.62■□□□□ 0.57
RAB5C-201ENST00000346213 DYNC1LI2O43237 492 aaPredicted RBP18.62■□□□□ 0.57
RAB5C-201ENST00000346213 CDC27P30260 824 aa18.62■□□□□ 0.57
RAB5C-201ENST00000346213 TLE2Q04725 743 aa18.62■□□□□ 0.57
RAB5C-201ENST00000346213 TYW1BQ6NUM6 668 aa18.62■□□□□ 0.57
RAB5C-201ENST00000346213 CCDC82Q8N4S0 544 aa18.62■□□□□ 0.57
RAB5C-201ENST00000346213 DNERQ8NFT8 737 aa18.62■□□□□ 0.57
RAB5C-201ENST00000346213 GPKOWQ92917 476 aaPredicted RBP eCLIP18.62■□□□□ 0.57
RAB5C-201ENST00000346213 PXMP2Q9NR77 195 aa18.62■□□□□ 0.57
RAB5C-201ENST00000346213 ADD3Q9UEY8 706 aaKnown RBP18.62■□□□□ 0.57
RAB5C-201ENST00000346213 CNTNAP5Q8WYK1 1306 aa18.61■□□□□ 0.57
RAB5C-201ENST00000346213 CCDC69A6NI79 296 aa18.61■□□□□ 0.57
RAB5C-201ENST00000346213 MDM2Q00987 491 aaPredicted RBP18.61■□□□□ 0.57
RAB5C-201ENST00000346213 DUSP28Q4G0W2 176 aa18.61■□□□□ 0.57
RAB5C-201ENST00000346213 CCDC62Q6P9F0 684 aa18.61■□□□□ 0.57
RAB5C-201ENST00000346213 CXCL17Q6UXB2 119 aa18.61■□□□□ 0.57
RAB5C-201ENST00000346213 SNX21Q969T3 373 aa18.61■□□□□ 0.57
RAB5C-201ENST00000346213 JAKMIP1Q96N16 626 aaKnown RBP18.61■□□□□ 0.57
RAB5C-201ENST00000346213 RMDN3Q96TC7 470 aa18.61■□□□□ 0.57
RAB5C-201ENST00000346213 WDR11Q9BZH6 1224 aa18.61■□□□□ 0.57
RAB5C-201ENST00000346213 ADAMTS3O15072 1205 aa18.6■□□□□ 0.57
RAB5C-201ENST00000346213 EPB41L2O43491 1005 aaKnown RBP18.6■□□□□ 0.57
RAB5C-201ENST00000346213 GNASQ5JWF2 1037 aa18.6■□□□□ 0.57
RAB5C-201ENST00000346213 RNF20Q5VTR2 975 aa18.6■□□□□ 0.57
RAB5C-201ENST00000346213 C1orf53Q5VUE5 145 aa18.6■□□□□ 0.57
RAB5C-201ENST00000346213 FANCBQ8NB91 859 aa18.6■□□□□ 0.57
RAB5C-201ENST00000346213 TSEN34Q9BSV6 310 aaKnown RBP18.6■□□□□ 0.57
RAB5C-201ENST00000346213 PNMA2Q9UL42 364 aa18.6■□□□□ 0.57
RAB5C-201ENST00000346213 CDK7P50613 346 aa18.6■□□□□ 0.57
RAB5C-201ENST00000346213 PSMC6P62333 389 aa18.6■□□□□ 0.57
RAB5C-201ENST00000346213 PDE4DQ08499 809 aa18.6■□□□□ 0.57
RAB5C-201ENST00000346213 APOBRQ0VD83 1088 aa18.6■□□□□ 0.57
RAB5C-201ENST00000346213 IQSEC1Q6DN90 963 aa18.6■□□□□ 0.57
RAB5C-201ENST00000346213 NOL8Q76FK4 1167 aaKnown RBP18.6■□□□□ 0.57
RAB5C-201ENST00000346213 CTCFLQ8NI51 663 aaPredicted RBP18.6■□□□□ 0.57
RAB5C-201ENST00000346213 PDCD2LQ9BRP1 358 aa18.6■□□□□ 0.57
RAB5C-201ENST00000346213 BCAS3Q9H6U6 928 aa18.6■□□□□ 0.57
RAB5C-201ENST00000346213 SLC12A7Q9Y666 1083 aa18.6■□□□□ 0.57
RAB5C-201ENST00000346213 PQBP1O60828 265 aaKnown RBP18.59■□□□□ 0.57
RAB5C-201ENST00000346213 FAAP100Q0VG06 881 aa18.59■□□□□ 0.57
RAB5C-201ENST00000346213 FSCN1Q16658 493 aaKnown RBP18.59■□□□□ 0.57
RAB5C-201ENST00000346213 LY6KQ17RY6 165 aa18.59■□□□□ 0.57
RAB5C-201ENST00000346213 USP17L6PQ6QN14 398 aa18.59■□□□□ 0.57
RAB5C-201ENST00000346213 TELO2Q9Y4R8 837 aa18.59■□□□□ 0.57
RAB5C-201ENST00000346213 LOC102724159A0A0B4J2E5 919 aa18.58■□□□□ 0.57
RAB5C-201ENST00000346213 KLF18A0A0U1RQI7 1052 aa18.58■□□□□ 0.57
RAB5C-201ENST00000346213 MOXD2PA6NHM9 499 aa18.58■□□□□ 0.57
RAB5C-201ENST00000346213 MEIS2O14770 477 aa18.58■□□□□ 0.57
RAB5C-201ENST00000346213 PWP2Q15269 919 aaKnown RBP18.58■□□□□ 0.57
RAB5C-201ENST00000346213 Q6ZUG5 572 aa18.58■□□□□ 0.57
RAB5C-201ENST00000346213 STARD7Q9NQZ5 370 aa18.58■□□□□ 0.57
RAB5C-201ENST00000346213 FRMPD4Q14CM0 1322 aa18.58■□□□□ 0.56
RAB5C-201ENST00000346213 PPFIA3O75145 1194 aa18.57■□□□□ 0.56
RAB5C-201ENST00000346213 NR3C2P08235 984 aa18.57■□□□□ 0.56
RAB5C-201ENST00000346213 RPS6KB1P23443 525 aa18.57■□□□□ 0.56
RAB5C-201ENST00000346213 EPHB4P54760 987 aa18.57■□□□□ 0.56
RAB5C-201ENST00000346213 PGM5Q15124 567 aa18.57■□□□□ 0.56
RAB5C-201ENST00000346213 SEPT14Q6ZU15 432 aa18.57■□□□□ 0.56
RAB5C-201ENST00000346213 FCHSD1Q86WN1 690 aa18.57■□□□□ 0.56
RAB5C-201ENST00000346213 MCF2L2Q86YR7 1114 aa18.57■□□□□ 0.56
RAB5C-201ENST00000346213 NSUN6Q8TEA1 469 aaKnown RBP18.57■□□□□ 0.56
RAB5C-201ENST00000346213 AGXT2Q9BYV1 514 aa18.57■□□□□ 0.56
RAB5C-201ENST00000346213 PRDM5Q9NQX1 630 aaPredicted RBP18.57■□□□□ 0.56
RAB5C-201ENST00000346213 KIF5BP33176 963 aa18.57■□□□□ 0.56
RAB5C-201ENST00000346213 MRPS9P82933 396 aaKnown RBP18.57■□□□□ 0.56
RAB5C-201ENST00000346213 SP2Q02086 613 aa18.57■□□□□ 0.56
RAB5C-201ENST00000346213 ARHGAP1Q07960 439 aa18.57■□□□□ 0.56
RAB5C-201ENST00000346213 TOB2Q14106 344 aaPredicted RBP18.57■□□□□ 0.56
RAB5C-201ENST00000346213 ARHGEF16Q5VV41 709 aa18.57■□□□□ 0.56
RAB5C-201ENST00000346213 WWC2Q6AWC2 1192 aa18.57■□□□□ 0.56
RAB5C-201ENST00000346213 ANKRD33Q7Z3H0 272 aa18.57■□□□□ 0.56
RAB5C-201ENST00000346213 HSCBQ8IWL3 235 aa18.57■□□□□ 0.56
RAB5C-201ENST00000346213 TMTC2Q8N394 836 aa18.57■□□□□ 0.56
RAB5C-201ENST00000346213 SLC43A3Q8NBI5 491 aa18.57■□□□□ 0.56
RAB5C-201ENST00000346213 BRF1Q92994 677 aa18.57■□□□□ 0.56
RAB5C-201ENST00000346213 LARP6Q9BRS8 491 aaKnown RBP18.57■□□□□ 0.56
RAB5C-201ENST00000346213 SORBS3O60504 671 aa18.56■□□□□ 0.56
RAB5C-201ENST00000346213 DTNBO60941 627 aa18.56■□□□□ 0.56
RAB5C-201ENST00000346213 ADD1P35611 737 aaKnown RBP18.56■□□□□ 0.56
RAB5C-201ENST00000346213 SEMA3FQ13275 785 aa18.56■□□□□ 0.56
RAB5C-201ENST00000346213 RABEP1Q15276 862 aa18.56■□□□□ 0.56
RAB5C-201ENST00000346213 UBE2SQ16763 222 aa18.56■□□□□ 0.56
RAB5C-201ENST00000346213 OR6J1Q8NGC5 347 aa18.56■□□□□ 0.56
RAB5C-201ENST00000346213 BADQ92934 168 aa18.56■□□□□ 0.56
RAB5C-201ENST00000346213 RRP36Q96EU6 259 aaKnown RBP18.56■□□□□ 0.56
RAB5C-201ENST00000346213 UMODL1Q5DID0 1318 aa18.55■□□□□ 0.56
RAB5C-201ENST00000346213 SLC34A2O95436 690 aa18.55■□□□□ 0.56
RAB5C-201ENST00000346213 TXNP10599 105 aaKnown RBP18.55■□□□□ 0.56
RAB5C-201ENST00000346213 CASTP20810 708 aaKnown RBP18.55■□□□□ 0.56
RAB5C-201ENST00000346213 SMARCA1P28370 1054 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms