RNA–Protein interactions for RNA: ENST00000343735.8

CLDN18-202, Transcript of claudin 18, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLDN18, Length 3,434 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18-202ENST00000343735 COPB2P35606 906 aa11.06□□□□□ -0.64
CLDN18-202ENST00000343735 USH1GQ495M9 461 aa11.06□□□□□ -0.64
CLDN18-202ENST00000343735 PIK3AP1Q6ZUJ8 805 aa11.06□□□□□ -0.64
CLDN18-202ENST00000343735 FAM205CA6NFA0 338 aa11.06□□□□□ -0.64
CLDN18-202ENST00000343735 LBX2Q6XYB7 198 aa11.06□□□□□ -0.64
CLDN18-202ENST00000343735 SHISA4Q96DD7 197 aa11.06□□□□□ -0.64
CLDN18-202ENST00000343735 GCOM1H8Y6P7 765 aaPredicted RBP11.06□□□□□ -0.64
CLDN18-202ENST00000343735 PPP6R2O75170 966 aa11.06□□□□□ -0.64
CLDN18-202ENST00000343735 POLR2MP0CAP2 368 aa11.06□□□□□ -0.64
CLDN18-202ENST00000343735 CDC25AP30304 524 aa11.06□□□□□ -0.64
CLDN18-202ENST00000343735 HUNKP57058 714 aa11.06□□□□□ -0.64
CLDN18-202ENST00000343735 FSTL1Q12841 308 aa11.06□□□□□ -0.64
CLDN18-202ENST00000343735 DHX8Q14562 1220 aaKnown RBP11.06□□□□□ -0.64
CLDN18-202ENST00000343735 SLC39A14Q15043 492 aa11.06□□□□□ -0.64
CLDN18-202ENST00000343735 CBX8Q9HC52 389 aa11.06□□□□□ -0.64
CLDN18-202ENST00000343735 CGNQ9P2M7 1197 aaKnown RBP11.06□□□□□ -0.64
CLDN18-202ENST00000343735 RABGAP1Q9Y3P9 1069 aa11.06□□□□□ -0.64
CLDN18-202ENST00000343735 PASKQ96RG2 1323 aa11.05□□□□□ -0.64
CLDN18-202ENST00000343735 SPDYE3A6NKU9 549 aa11.05□□□□□ -0.64
CLDN18-202ENST00000343735 CST9Q5W186 159 aa11.05□□□□□ -0.64
CLDN18-202ENST00000343735 AOPEPQ8N6M6 819 aa11.05□□□□□ -0.64
CLDN18-202ENST00000343735 LAD1O00515 517 aa11.05□□□□□ -0.64
CLDN18-202ENST00000343735 KIF3CO14782 793 aa11.05□□□□□ -0.64
CLDN18-202ENST00000343735 SPTLC2O15270 562 aa11.05□□□□□ -0.64
CLDN18-202ENST00000343735 CLK2P49760 499 aaKnown RBP11.05□□□□□ -0.64
CLDN18-202ENST00000343735 TTC38Q5R3I4 469 aa11.05□□□□□ -0.64
CLDN18-202ENST00000343735 SPRYD7Q5W111 196 aa11.05□□□□□ -0.64
CLDN18-202ENST00000343735 LINC00301Q8NCQ3 95 aa11.05□□□□□ -0.64
CLDN18-202ENST00000343735 TEX13BQ9BXU2 312 aa11.05□□□□□ -0.64
CLDN18-202ENST00000343735 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.05□□□□□ -0.64
CLDN18-202ENST00000343735 BIN2Q9UBW5 565 aaPredicted RBP11.05□□□□□ -0.64
CLDN18-202ENST00000343735 SNAP25P60880 206 aa11.05□□□□□ -0.64
CLDN18-202ENST00000343735 NEK8Q86SG6 692 aa11.05□□□□□ -0.64
CLDN18-202ENST00000343735 ATG4CQ96DT6 458 aa11.05□□□□□ -0.64
CLDN18-202ENST00000343735 HHIPL1Q96JK4 782 aa11.05□□□□□ -0.64
CLDN18-202ENST00000343735 FBXO40Q9UH90 709 aa11.05□□□□□ -0.64
CLDN18-202ENST00000343735 INHBEP58166 350 aa11.04□□□□□ -0.64
CLDN18-202ENST00000343735 NOM1Q5C9Z4 860 aaKnown RBP11.04□□□□□ -0.64
CLDN18-202ENST00000343735 ANKRD23Q86SG2 305 aa11.04□□□□□ -0.64
CLDN18-202ENST00000343735 CPXCR1Q8N123 301 aa11.04□□□□□ -0.64
CLDN18-202ENST00000343735 CCDC102AQ96A19 550 aa11.04□□□□□ -0.64
CLDN18-202ENST00000343735 TRPM7Q96QT4 1865 aa11.04□□□□□ -0.64
CLDN18-202ENST00000343735 LOC285556D6RIA3 1793 aa11.04□□□□□ -0.64
CLDN18-202ENST00000343735 SPDYE16A6NNV3 312 aaPredicted RBP11.04□□□□□ -0.64
CLDN18-202ENST00000343735 PES1O00541 588 aaKnown RBP11.04□□□□□ -0.64
CLDN18-202ENST00000343735 FOXN1O15353 648 aa11.04□□□□□ -0.64
CLDN18-202ENST00000343735 GCFC2P16383 781 aaKnown RBP11.04□□□□□ -0.64
CLDN18-202ENST00000343735 USP11P51784 963 aa11.04□□□□□ -0.64
CLDN18-202ENST00000343735 NDUFA8P51970 172 aa11.04□□□□□ -0.64
CLDN18-202ENST00000343735 TERF1P54274 439 aa11.04□□□□□ -0.64
CLDN18-202ENST00000343735 FMR1Q06787 632 aaKnown RBP eCLIP11.04□□□□□ -0.64
CLDN18-202ENST00000343735 DGKZQ13574 1117 aa11.04□□□□□ -0.64
CLDN18-202ENST00000343735 TREML2Q5T2D2 321 aa11.04□□□□□ -0.64
CLDN18-202ENST00000343735 JAKMIP3Q5VZ66 844 aa11.04□□□□□ -0.64
CLDN18-202ENST00000343735 RAVER2Q9HCJ3 691 aaKnown RBP11.04□□□□□ -0.64
CLDN18-202ENST00000343735 ZCCHC17Q9NP64 241 aaKnown RBP11.04□□□□□ -0.64
CLDN18-202ENST00000343735 ZNF536O15090 1300 aa11.04□□□□□ -0.64
CLDN18-202ENST00000343735 MANSC4A6NHS7 340 aaPredicted RBP11.03□□□□□ -0.64
CLDN18-202ENST00000343735 ALAS1P13196 640 aa11.03□□□□□ -0.64
CLDN18-202ENST00000343735 AFMP43652 599 aa11.03□□□□□ -0.64
CLDN18-202ENST00000343735 ZNF157P51786 506 aaPredicted RBP11.03□□□□□ -0.64
CLDN18-202ENST00000343735 GHRHRQ02643 423 aa11.03□□□□□ -0.64
CLDN18-202ENST00000343735 NAA30Q147X3 362 aaPredicted RBP11.03□□□□□ -0.64
CLDN18-202ENST00000343735 RGMBQ6NW40 437 aa11.03□□□□□ -0.64
CLDN18-202ENST00000343735 CHST13Q8NET6 341 aa11.03□□□□□ -0.64
CLDN18-202ENST00000343735 CCL15-CCL14A0A0B4J2E2 113 aa11.03□□□□□ -0.64
CLDN18-202ENST00000343735 STAT3P40763 770 aa11.03□□□□□ -0.64
CLDN18-202ENST00000343735 TOB1P50616 345 aaPredicted RBP11.03□□□□□ -0.64
CLDN18-202ENST00000343735 GRIN1Q05586 938 aa11.03□□□□□ -0.64
CLDN18-202ENST00000343735 CCL15Q16663 113 aa11.03□□□□□ -0.64
CLDN18-202ENST00000343735 ADALQ6DHV7 355 aa11.03□□□□□ -0.64
CLDN18-202ENST00000343735 TBCKQ8TEA7 893 aa11.03□□□□□ -0.64
CLDN18-202ENST00000343735 FERMT2Q96AC1 680 aa11.03□□□□□ -0.64
CLDN18-202ENST00000343735 AGBL1Q96MI9 1066 aa11.03□□□□□ -0.64
CLDN18-202ENST00000343735 TRERF1Q96PN7 1200 aa11.03□□□□□ -0.64
CLDN18-202ENST00000343735 ASCC2Q9H1I8 757 aaPredicted RBP11.03□□□□□ -0.64
CLDN18-202ENST00000343735 CCDC39Q9UFE4 941 aa11.03□□□□□ -0.64
CLDN18-202ENST00000343735 PCDHA7Q9UN72 937 aa11.03□□□□□ -0.64
CLDN18-202ENST00000343735 MAPK8IP1Q9UQF2 711 aa11.03□□□□□ -0.64
CLDN18-202ENST00000343735 TLL2Q9Y6L7 1015 aa11.03□□□□□ -0.64
CLDN18-202ENST00000343735 TMEM88BA6NKF7 163 aa11.03□□□□□ -0.64
CLDN18-202ENST00000343735 MEIS2O14770 477 aa11.03□□□□□ -0.64
CLDN18-202ENST00000343735 SLC25A27O95847 323 aa11.03□□□□□ -0.64
CLDN18-202ENST00000343735 STX17P56962 302 aa11.03□□□□□ -0.64
CLDN18-202ENST00000343735 ARL6IP4Q66PJ3 421 aaKnown RBP11.03□□□□□ -0.64
CLDN18-202ENST00000343735 SNRNP48Q6IEG0 339 aaKnown RBP11.03□□□□□ -0.64
CLDN18-202ENST00000343735 MOXD1Q6UVY6 613 aa11.03□□□□□ -0.64
CLDN18-202ENST00000343735 SAPCD2Q86UD0 394 aa11.03□□□□□ -0.64
CLDN18-202ENST00000343735 REPS2Q8NFH8 660 aa11.03□□□□□ -0.64
CLDN18-202ENST00000343735 MYH15Q9Y2K3 1946 aa11.02□□□□□ -0.64
CLDN18-202ENST00000343735 CUTAO60888 179 aa11.02□□□□□ -0.64
CLDN18-202ENST00000343735 CFBP00751 764 aa11.02□□□□□ -0.64
CLDN18-202ENST00000343735 GJA5P36382 358 aa11.02□□□□□ -0.64
CLDN18-202ENST00000343735 HERVK_113P62684 666 aa11.02□□□□□ -0.64
CLDN18-202ENST00000343735 INF2Q27J81 1249 aa11.02□□□□□ -0.64
CLDN18-202ENST00000343735 TRMT44Q8IYL2 757 aaKnown RBP11.02□□□□□ -0.64
CLDN18-202ENST00000343735 KRI1Q8N9T8 703 aaKnown RBP11.02□□□□□ -0.64
CLDN18-202ENST00000343735 RASSF8Q8NHQ8 419 aa11.02□□□□□ -0.64
CLDN18-202ENST00000343735 RASGRP4Q8TDF6 673 aa11.02□□□□□ -0.64
CLDN18-202ENST00000343735 MS4A4AQ96JQ5 239 aa11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms