RNA–Protein interactions for RNA: ENST00000343550.9

USF2-202, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 1 (best) BASIC

Gene USF2, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-202ENST00000343550 USH1GQ495M9 461 aa20.9■□□□□ 0.94
USF2-202ENST00000343550 IQSEC1Q6DN90 963 aa20.9■□□□□ 0.94
USF2-202ENST00000343550 EEPD1Q7L9B9 569 aa20.9■□□□□ 0.94
USF2-202ENST00000343550 TLK2Q86UE8 772 aa20.9■□□□□ 0.94
USF2-202ENST00000343550 FANCBQ8NB91 859 aa20.9■□□□□ 0.94
USF2-202ENST00000343550 PURBQ96QR8 312 aaKnown RBP20.9■□□□□ 0.94
USF2-202ENST00000343550 PDGFCQ9NRA1 345 aa20.9■□□□□ 0.94
USF2-202ENST00000343550 BRPF3Q9ULD4 1205 aa20.9■□□□□ 0.94
USF2-202ENST00000343550 SMPD1P17405 629 aa20.89■□□□□ 0.94
USF2-202ENST00000343550 RXRAP19793 462 aa20.89■□□□□ 0.94
USF2-202ENST00000343550 CASTP20810 708 aaKnown RBP20.89■□□□□ 0.94
USF2-202ENST00000343550 RPS6KB1P23443 525 aa20.89■□□□□ 0.94
USF2-202ENST00000343550 SMARCA1P28370 1054 aa20.89■□□□□ 0.94
USF2-202ENST00000343550 BAATQ14032 418 aaPredicted RBP20.89■□□□□ 0.94
USF2-202ENST00000343550 TAPT1Q6NXT6 567 aa20.89■□□□□ 0.94
USF2-202ENST00000343550 SYNE3Q6ZMZ3 975 aa20.89■□□□□ 0.94
USF2-202ENST00000343550 FBXO11Q86XK2 927 aa20.89■□□□□ 0.94
USF2-202ENST00000343550 MORC4Q8TE76 937 aa20.89■□□□□ 0.94
USF2-202ENST00000343550 AP5M1Q9H0R1 490 aa20.89■□□□□ 0.94
USF2-202ENST00000343550 ZBTB5O15062 677 aa20.88■□□□□ 0.93
USF2-202ENST00000343550 DYNC1LI2O43237 492 aaPredicted RBP20.88■□□□□ 0.93
USF2-202ENST00000343550 SEC24BO95487 1268 aa20.88■□□□□ 0.93
USF2-202ENST00000343550 FSCN1Q16658 493 aaKnown RBP20.88■□□□□ 0.93
USF2-202ENST00000343550 MFSD5Q6N075 450 aa20.88■□□□□ 0.93
USF2-202ENST00000343550 APOA5Q6Q788 366 aa20.88■□□□□ 0.93
USF2-202ENST00000343550 CXCL17Q6UXB2 119 aa20.88■□□□□ 0.93
USF2-202ENST00000343550 Q6ZUG5 572 aa20.88■□□□□ 0.93
USF2-202ENST00000343550 RAB11FIP4Q86YS3 637 aa20.88■□□□□ 0.93
USF2-202ENST00000343550 FBXO16Q8IX29 292 aaPredicted RBP20.88■□□□□ 0.93
USF2-202ENST00000343550 FAM126BQ8IXS8 530 aa20.88■□□□□ 0.93
USF2-202ENST00000343550 FBXL16Q8N461 479 aa20.88■□□□□ 0.93
USF2-202ENST00000343550 PIGSQ96S52 555 aa20.88■□□□□ 0.93
USF2-202ENST00000343550 CDX2Q99626 313 aaPredicted RBP20.88■□□□□ 0.93
USF2-202ENST00000343550 ZSWIM6Q9HCJ5 1215 aa20.88■□□□□ 0.93
USF2-202ENST00000343550 ADD3Q9UEY8 706 aaKnown RBP20.88■□□□□ 0.93
USF2-202ENST00000343550 EIF5BO60841 1220 aaKnown RBP20.88■□□□□ 0.93
USF2-202ENST00000343550 PPP1R11O60927 126 aaPredicted RBP20.88■□□□□ 0.93
USF2-202ENST00000343550 CABYRO75952 493 aa20.88■□□□□ 0.93
USF2-202ENST00000343550 PTGS1P23219 599 aa20.88■□□□□ 0.93
USF2-202ENST00000343550 GNAQP50148 359 aa20.88■□□□□ 0.93
USF2-202ENST00000343550 RUFY3Q7L099 469 aa20.88■□□□□ 0.93
USF2-202ENST00000343550 RGS22Q8NE09 1264 aa20.88■□□□□ 0.93
USF2-202ENST00000343550 LZTS2Q9BRK4 669 aa20.88■□□□□ 0.93
USF2-202ENST00000343550 AMNQ9BXJ7 453 aa20.88■□□□□ 0.93
USF2-202ENST00000343550 TM6SF1Q9BZW5 370 aa20.88■□□□□ 0.93
USF2-202ENST00000343550 VTA1Q9NP79 307 aa20.88■□□□□ 0.93
USF2-202ENST00000343550 Q9Y3F1 56 aa20.88■□□□□ 0.93
USF2-202ENST00000343550 ABCB11O95342 1321 aa20.87■□□□□ 0.93
USF2-202ENST00000343550 TLR3O15455 904 aaKnown RBP20.87■□□□□ 0.93
USF2-202ENST00000343550 ZEB2O60315 1214 aa20.87■□□□□ 0.93
USF2-202ENST00000343550 FGD1P98174 961 aa20.87■□□□□ 0.93
USF2-202ENST00000343550 SRBD1Q8N5C6 995 aaKnown RBP20.87■□□□□ 0.93
USF2-202ENST00000343550 SPZ1Q9BXG8 430 aa20.87■□□□□ 0.93
USF2-202ENST00000343550 AGXT2Q9BYV1 514 aa20.87■□□□□ 0.93
USF2-202ENST00000343550 TTYH1Q9H313 450 aaPredicted RBP20.87■□□□□ 0.93
USF2-202ENST00000343550 BAZ2BQ9UIF8 2168 aaKnown RBP20.86■□□□□ 0.93
USF2-202ENST00000343550 PNMA6FA0A0J9YX94 578 aa20.86■□□□□ 0.93
USF2-202ENST00000343550 PTPDC1A2A3K4 754 aa20.86■□□□□ 0.93
USF2-202ENST00000343550 PLEKHA8P1O95397 391 aa20.86■□□□□ 0.93
USF2-202ENST00000343550 CD4P01730 458 aa20.86■□□□□ 0.93
USF2-202ENST00000343550 TMEM63BQ5T3F8 832 aa20.86■□□□□ 0.93
USF2-202ENST00000343550 RNF207Q6ZRF8 634 aa20.86■□□□□ 0.93
USF2-202ENST00000343550 MICU3Q86XE3 530 aa20.86■□□□□ 0.93
USF2-202ENST00000343550 HOMER1Q86YM7 354 aa20.86■□□□□ 0.93
USF2-202ENST00000343550 CMTR1Q8N1G2 835 aaKnown RBP20.86■□□□□ 0.93
USF2-202ENST00000343550 SLC43A3Q8NBI5 491 aa20.86■□□□□ 0.93
USF2-202ENST00000343550 TBC1D5Q92609 795 aa20.86■□□□□ 0.93
USF2-202ENST00000343550 MAF1Q9H063 256 aa20.86■□□□□ 0.93
USF2-202ENST00000343550 MRPL11Q9Y3B7 192 aaKnown RBP20.86■□□□□ 0.93
USF2-202ENST00000343550 KLF18A0A0U1RQI7 1052 aa20.85■□□□□ 0.93
USF2-202ENST00000343550 ZBTB43O43298 467 aa20.85■□□□□ 0.93
USF2-202ENST00000343550 ALDH5A1P51649 535 aaPredicted RBP20.85■□□□□ 0.93
USF2-202ENST00000343550 RPS6P62753 249 aaKnown RBP20.85■□□□□ 0.93
USF2-202ENST00000343550 PPIGQ13427 754 aaKnown RBP eCLIP20.85■□□□□ 0.934e-7■□□□□ 9.8
USF2-202ENST00000343550 TMEM199Q8N511 208 aa20.85■□□□□ 0.93
USF2-202ENST00000343550 BRF1Q92994 677 aa20.85■□□□□ 0.93
USF2-202ENST00000343550 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.85■□□□□ 0.932e-8■■■■□ 20.9
USF2-202ENST00000343550 PCDHA1Q9Y5I3 950 aa20.85■□□□□ 0.93
USF2-202ENST00000343550 CYP46A1Q9Y6A2 500 aa20.85■□□□□ 0.93
USF2-202ENST00000343550 MYH6P13533 1939 aa20.85■□□□□ 0.93
USF2-202ENST00000343550 UNC80Q8N2C7 3258 aa20.84■□□□□ 0.93
USF2-202ENST00000343550 LOC102724159A0A0B4J2E5 919 aa20.84■□□□□ 0.93
USF2-202ENST00000343550 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.84■□□□□ 0.93
USF2-202ENST00000343550 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.84■□□□□ 0.93
USF2-202ENST00000343550 CSF2RAP15509 400 aa20.84■□□□□ 0.93
USF2-202ENST00000343550 APOBRQ0VD83 1088 aa20.84■□□□□ 0.93
USF2-202ENST00000343550 ITGA7Q13683 1181 aa20.84■□□□□ 0.93
USF2-202ENST00000343550 PWP2Q15269 919 aaKnown RBP20.84■□□□□ 0.93
USF2-202ENST00000343550 C8orf34Q49A92 452 aa20.84■□□□□ 0.93
USF2-202ENST00000343550 C16orf59Q7L2K0 433 aa20.84■□□□□ 0.93
USF2-202ENST00000343550 PIBF1Q8WXW3 757 aa20.84■□□□□ 0.93
USF2-202ENST00000343550 PPP1R12CQ9BZL4 782 aa20.84■□□□□ 0.93
USF2-202ENST00000343550 GRIN2DO15399 1336 aa20.84■□□□□ 0.93
USF2-202ENST00000343550 CDH23Q9H251 3354 aa20.84■□□□□ 0.93
USF2-202ENST00000343550 CALML3P27482 149 aa20.83■□□□□ 0.93
USF2-202ENST00000343550 TRAF1Q13077 416 aa20.83■□□□□ 0.93
USF2-202ENST00000343550 DUSP28Q4G0W2 176 aa20.83■□□□□ 0.93
USF2-202ENST00000343550 SLC30A10Q6XR72 485 aa20.83■□□□□ 0.93
USF2-202ENST00000343550 MCF2L2Q86YR7 1114 aa20.83■□□□□ 0.93
USF2-202ENST00000343550 CCDC82Q8N4S0 544 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms