RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 LLGL1Q15334 1064 aa8.83□□□□□ -1
UBE4B-202ENST00000343090 UBE2SQ16763 222 aa8.83□□□□□ -1
UBE4B-202ENST00000343090 IQCDQ96DY2 449 aa8.83□□□□□ -1
UBE4B-202ENST00000343090 OSBPL5Q9H0X9 879 aaPredicted RBP8.83□□□□□ -1
UBE4B-202ENST00000343090 CPVLQ9H3G5 476 aa8.83□□□□□ -1
UBE4B-202ENST00000343090 STK24Q9Y6E0 443 aa8.83□□□□□ -1
UBE4B-202ENST00000343090 A2ML1A8K2U0 1454 aa8.83□□□□□ -1
UBE4B-202ENST00000343090 ANKARQ7Z5J8 1434 aa8.83□□□□□ -1
UBE4B-202ENST00000343090 LAMC1P11047 1609 aa8.83□□□□□ -1
UBE4B-202ENST00000343090 CCDC160A6NGH7 325 aa8.83□□□□□ -1
UBE4B-202ENST00000343090 AP5Z1O43299 807 aa8.83□□□□□ -1
UBE4B-202ENST00000343090 PRPF3O43395 683 aaKnown RBP8.83□□□□□ -1
UBE4B-202ENST00000343090 KRT15P19012 456 aa8.83□□□□□ -1
UBE4B-202ENST00000343090 PLCG1P19174 1290 aa8.83□□□□□ -1
UBE4B-202ENST00000343090 RESP18Q5W5W9 173 aa8.83□□□□□ -1
UBE4B-202ENST00000343090 E4F1Q66K89 784 aaPredicted RBP8.83□□□□□ -1
UBE4B-202ENST00000343090 GDAQ9Y2T3 454 aa8.83□□□□□ -1
UBE4B-202ENST00000343090 NOP56O00567 594 aaKnown RBP8.83□□□□□ -1
UBE4B-202ENST00000343090 NMT2O60551 498 aa8.83□□□□□ -1
UBE4B-202ENST00000343090 SETSIPP0DME0 302 aa8.83□□□□□ -1
UBE4B-202ENST00000343090 DLATP10515 647 aaKnown RBP8.83□□□□□ -1
UBE4B-202ENST00000343090 CDC27P30260 824 aa8.83□□□□□ -1
UBE4B-202ENST00000343090 LIFRP42702 1097 aa8.83□□□□□ -1
UBE4B-202ENST00000343090 TRAPPC10P48553 1259 aa8.83□□□□□ -1
UBE4B-202ENST00000343090 SATB1Q01826 763 aa8.83□□□□□ -1
UBE4B-202ENST00000343090 MTMR3Q13615 1198 aa8.83□□□□□ -1
UBE4B-202ENST00000343090 NYAP1Q6ZVC0 841 aa8.83□□□□□ -1
UBE4B-202ENST00000343090 SLFN12Q8IYM2 578 aa8.83□□□□□ -1
UBE4B-202ENST00000343090 STK38LQ9Y2H1 464 aa8.83□□□□□ -1
UBE4B-202ENST00000343090 RPAP1Q9BWH6 1393 aaPredicted RBP8.83□□□□□ -1
UBE4B-202ENST00000343090 RGS16O15492 202 aaPredicted RBP8.82□□□□□ -1
UBE4B-202ENST00000343090 FTCDO95954 541 aa8.82□□□□□ -1
UBE4B-202ENST00000343090 PRR29P0C7W0 189 aa8.82□□□□□ -1
UBE4B-202ENST00000343090 H2AFXP16104 143 aaPredicted RBP8.82□□□□□ -1
UBE4B-202ENST00000343090 NR2F2P24468 414 aa8.82□□□□□ -1
UBE4B-202ENST00000343090 GBP1P32455 592 aa8.82□□□□□ -1
UBE4B-202ENST00000343090 CORO7P57737 925 aa8.82□□□□□ -1
UBE4B-202ENST00000343090 MAP3K9P80192 1104 aa8.82□□□□□ -1
UBE4B-202ENST00000343090 CUL4BQ13620 913 aa8.82□□□□□ -1
UBE4B-202ENST00000343090 EXOC3L4Q17RC7 722 aa8.82□□□□□ -1
UBE4B-202ENST00000343090 PPM1KQ8N3J5 372 aa8.82□□□□□ -1
UBE4B-202ENST00000343090 PROCA1Q8NCQ7 364 aaPredicted RBP8.82□□□□□ -1
UBE4B-202ENST00000343090 VPS37BQ9H9H4 285 aa8.82□□□□□ -1
UBE4B-202ENST00000343090 PSD3Q9NYI0 1048 aa8.82□□□□□ -1
UBE4B-202ENST00000343090 CROCC2H7BZ55 1655 aa8.82□□□□□ -1
UBE4B-202ENST00000343090 CLIC2O15247 247 aa8.82□□□□□ -1
UBE4B-202ENST00000343090 H2AFZP0C0S5 128 aa8.82□□□□□ -1
UBE4B-202ENST00000343090 PCP11498 1178 aaKnown RBP8.82□□□□□ -1
UBE4B-202ENST00000343090 EEF1GP26641 437 aaKnown RBP8.82□□□□□ -1
UBE4B-202ENST00000343090 ALDH3A1P30838 453 aa8.82□□□□□ -1
UBE4B-202ENST00000343090 ZNF131P52739 623 aa8.82□□□□□ -1
UBE4B-202ENST00000343090 PPP2R5DQ14738 602 aa8.82□□□□□ -1
UBE4B-202ENST00000343090 KRT31Q15323 416 aa8.82□□□□□ -1
UBE4B-202ENST00000343090 XKR9Q5GH70 373 aa8.82□□□□□ -1
UBE4B-202ENST00000343090 ARMCX5Q6P1M9 558 aa8.82□□□□□ -1
UBE4B-202ENST00000343090 STOX1Q6ZVD7 989 aa8.82□□□□□ -1
UBE4B-202ENST00000343090 H2AFVQ71UI9 128 aa8.82□□□□□ -1
UBE4B-202ENST00000343090 TAOK1Q7L7X3 1001 aa8.82□□□□□ -1
UBE4B-202ENST00000343090 VSIG1Q86XK7 387 aa8.82□□□□□ -1
UBE4B-202ENST00000343090 FMR1NBQ8N0W7 255 aaPredicted RBP8.82□□□□□ -1
UBE4B-202ENST00000343090 RAB17Q9H0T7 212 aa8.82□□□□□ -1
UBE4B-202ENST00000343090 IL25Q9H293 177 aa8.82□□□□□ -1
UBE4B-202ENST00000343090 RWDD2AQ9UIY3 292 aa8.82□□□□□ -1
UBE4B-202ENST00000343090 ATP10DQ9P241 1426 aa8.82□□□□□ -1
UBE4B-202ENST00000343090 TULP4Q9NRJ4 1543 aa8.82□□□□□ -1
UBE4B-202ENST00000343090 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.82□□□□□ -1
UBE4B-202ENST00000343090 GDF11O95390 407 aa8.82□□□□□ -1
UBE4B-202ENST00000343090 IFNB1P01574 187 aa8.82□□□□□ -1
UBE4B-202ENST00000343090 POLR2MP0CAP2 368 aa8.82□□□□□ -1
UBE4B-202ENST00000343090 ALDH1B1P30837 517 aa8.82□□□□□ -1
UBE4B-202ENST00000343090 SCARF1Q14162 830 aa8.82□□□□□ -1
UBE4B-202ENST00000343090 CFAP157Q5JU67 520 aa8.82□□□□□ -1
UBE4B-202ENST00000343090 DHTKD1Q96HY7 919 aaPredicted RBP8.82□□□□□ -1
UBE4B-202ENST00000343090 ABCC12Q96J65 1359 aa8.82□□□□□ -1
UBE4B-202ENST00000343090 KIF28PB7ZC32 967 aa8.82□□□□□ -1
UBE4B-202ENST00000343090 FOXN1O15353 648 aa8.82□□□□□ -1
UBE4B-202ENST00000343090 SMIM24O75264 130 aa8.82□□□□□ -1
UBE4B-202ENST00000343090 APBA3O96018 575 aa8.82□□□□□ -1
UBE4B-202ENST00000343090 SNAP25P60880 206 aa8.82□□□□□ -1
UBE4B-202ENST00000343090 HHATQ5VTY9 493 aa8.82□□□□□ -1
UBE4B-202ENST00000343090 NLRX1Q86UT6 975 aa8.82□□□□□ -1
UBE4B-202ENST00000343090 DHX40Q8IX18 779 aaKnown RBP8.82□□□□□ -1
UBE4B-202ENST00000343090 NHEJ1Q9H9Q4 299 aaPredicted RBP8.82□□□□□ -1
UBE4B-202ENST00000343090 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.82□□□□□ -1
UBE4B-202ENST00000343090 LCMT1Q9UIC8 334 aa8.82□□□□□ -1
UBE4B-202ENST00000343090 FAM184BQ9ULE4 1060 aa8.82□□□□□ -1
UBE4B-202ENST00000343090 XDHP47989 1333 aa8.82□□□□□ -1
UBE4B-202ENST00000343090 TRIM49BA6NDI0 452 aa8.82□□□□□ -1
UBE4B-202ENST00000343090 FAM133AQ8N9E0 248 aa8.82□□□□□ -1
UBE4B-202ENST00000343090 CHURC1Q8WUH1 139 aa8.82□□□□□ -1
UBE4B-202ENST00000343090 TPX2Q9ULW0 747 aaKnown RBP8.82□□□□□ -1
UBE4B-202ENST00000343090 RABGAP1Q9Y3P9 1069 aa8.82□□□□□ -1
UBE4B-202ENST00000343090 COL4A3BPQ9Y5P4 624 aa8.82□□□□□ -1
UBE4B-202ENST00000343090 MRFAP1Q9Y605 127 aa8.82□□□□□ -1
UBE4B-202ENST00000343090 E9PCH4 1651 aa8.81□□□□□ -1
UBE4B-202ENST00000343090 CA8P35219 290 aa8.81□□□□□ -1
UBE4B-202ENST00000343090 EIF4A3P38919 411 aaKnown RBP8.81□□□□□ -1
UBE4B-202ENST00000343090 SLC7A5Q01650 507 aa8.81□□□□□ -1
UBE4B-202ENST00000343090 MB21D2Q8IYB1 491 aaPredicted RBP8.81□□□□□ -1
UBE4B-202ENST00000343090 PTPN22Q9Y2R2 807 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms