RNA–Protein interactions for RNA: ENST00000342310.7

LMX1A-202, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,545 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-202ENST00000342310 BRD3Q15059 726 aa13.91□□□□□ -0.18
LMX1A-202ENST00000342310 CNNM4Q6P4Q7 775 aa13.91□□□□□ -0.18
LMX1A-202ENST00000342310 FAM114A1Q8IWE2 563 aa13.91□□□□□ -0.18
LMX1A-202ENST00000342310 TAF4BQ92750 862 aa13.91□□□□□ -0.18
LMX1A-202ENST00000342310 HAUS4Q9H6D7 363 aa13.91□□□□□ -0.18
LMX1A-202ENST00000342310 EPHB6O15197 1021 aa13.91□□□□□ -0.18
LMX1A-202ENST00000342310 SLC37A4O43826 429 aa13.91□□□□□ -0.18
LMX1A-202ENST00000342310 CYP2C19P33261 490 aa13.91□□□□□ -0.18
LMX1A-202ENST00000342310 SLC1A4P43007 532 aa13.91□□□□□ -0.18
LMX1A-202ENST00000342310 GSTO1P78417 241 aa13.91□□□□□ -0.18
LMX1A-202ENST00000342310 SHROOM1Q2M3G4 852 aaPredicted RBP13.91□□□□□ -0.18
LMX1A-202ENST00000342310 MAP9Q49MG5 647 aa13.91□□□□□ -0.18
LMX1A-202ENST00000342310 CDKAL1Q5VV42 579 aa13.91□□□□□ -0.18
LMX1A-202ENST00000342310 NDST4Q9H3R1 872 aa13.91□□□□□ -0.18
LMX1A-202ENST00000342310 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.91□□□□□ -0.18
LMX1A-202ENST00000342310 GOLGA6BA6NDN3 693 aa13.91□□□□□ -0.18
LMX1A-202ENST00000342310 USP17L10C9JJH3 530 aa13.91□□□□□ -0.18
LMX1A-202ENST00000342310 MYO1CO00159 1063 aa13.91□□□□□ -0.18
LMX1A-202ENST00000342310 BACH1O14867 736 aa13.91□□□□□ -0.18
LMX1A-202ENST00000342310 SP4Q02446 784 aa13.91□□□□□ -0.18
LMX1A-202ENST00000342310 RNF187Q5TA31 235 aaPredicted RBP13.91□□□□□ -0.18
LMX1A-202ENST00000342310 KRT25Q7Z3Z0 450 aa13.91□□□□□ -0.18
LMX1A-202ENST00000342310 TBC1D5Q92609 795 aa13.91□□□□□ -0.18
LMX1A-202ENST00000342310 CCDC43Q96MW1 224 aaKnown RBP13.91□□□□□ -0.18
LMX1A-202ENST00000342310 MAD2L2Q9UI95 211 aa13.91□□□□□ -0.18
LMX1A-202ENST00000342310 SLIT3O75094 1523 aa13.9□□□□□ -0.18
LMX1A-202ENST00000342310 SORBS3O60504 671 aa13.9□□□□□ -0.18
LMX1A-202ENST00000342310 RASA1P20936 1047 aa13.9□□□□□ -0.18
LMX1A-202ENST00000342310 GGCXP38435 758 aa13.9□□□□□ -0.18
LMX1A-202ENST00000342310 GPSM2P81274 684 aa13.9□□□□□ -0.18
LMX1A-202ENST00000342310 NPY5RQ15761 445 aa13.9□□□□□ -0.18
LMX1A-202ENST00000342310 NAALADL2Q58DX5 795 aa13.9□□□□□ -0.18
LMX1A-202ENST00000342310 ZFYVE27Q5T4F4 411 aa13.9□□□□□ -0.18
LMX1A-202ENST00000342310 C8orf74Q6P047 294 aa13.9□□□□□ -0.18
LMX1A-202ENST00000342310 FBXO33Q7Z6M2 555 aa13.9□□□□□ -0.18
LMX1A-202ENST00000342310 GPBP1Q86WP2 473 aa13.9□□□□□ -0.18
LMX1A-202ENST00000342310 EHD4Q9H223 541 aa13.9□□□□□ -0.18
LMX1A-202ENST00000342310 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.9□□□□□ -0.18
LMX1A-202ENST00000342310 CAPN6Q9Y6Q1 641 aa13.9□□□□□ -0.18
LMX1A-202ENST00000342310 PCNTO95613 3336 aa13.9□□□□□ -0.18
LMX1A-202ENST00000342310 POTEB3A0JP26 581 aa13.9□□□□□ -0.18
LMX1A-202ENST00000342310 ZSCAN5CA6NGD5 496 aaPredicted RBP13.9□□□□□ -0.18
LMX1A-202ENST00000342310 MYMKA6NI61 221 aa13.9□□□□□ -0.18
LMX1A-202ENST00000342310 POTECB2RU33 542 aa13.9□□□□□ -0.18
LMX1A-202ENST00000342310 CCNE1P24864 410 aa13.9□□□□□ -0.18
LMX1A-202ENST00000342310 KIF11P52732 1056 aa13.9□□□□□ -0.18
LMX1A-202ENST00000342310 KIAA0753Q2KHM9 967 aa13.9□□□□□ -0.18
LMX1A-202ENST00000342310 POTEBQ6S5H4 581 aa13.9□□□□□ -0.18
LMX1A-202ENST00000342310 CD209Q9NNX6 404 aa13.9□□□□□ -0.18
LMX1A-202ENST00000342310 GOLGA6CA6NDK9 693 aa13.9□□□□□ -0.18
LMX1A-202ENST00000342310 ZRANB2O95218 330 aaKnown RBP eCLIP13.9□□□□□ -0.18
LMX1A-202ENST00000342310 GOLGA6DP0CG33 693 aa13.9□□□□□ -0.18
LMX1A-202ENST00000342310 GUCY2DQ02846 1103 aa13.9□□□□□ -0.18
LMX1A-202ENST00000342310 SH2D3CQ8N5H7 860 aa13.9□□□□□ -0.18
LMX1A-202ENST00000342310 AFAP1L1Q8TED9 768 aa13.9□□□□□ -0.18
LMX1A-202ENST00000342310 PYM1Q9BRP8 204 aaKnown RBP13.9□□□□□ -0.18
LMX1A-202ENST00000342310 LRRC1Q9BTT6 524 aa13.9□□□□□ -0.18
LMX1A-202ENST00000342310 PSTPIP2Q9H939 334 aa13.9□□□□□ -0.18
LMX1A-202ENST00000342310 BARHL2Q9NY43 387 aa13.9□□□□□ -0.18
LMX1A-202ENST00000342310 GOLGA6AQ9NYA3 693 aa13.9□□□□□ -0.18
LMX1A-202ENST00000342310 DDX25Q9UHL0 483 aaKnown RBP13.9□□□□□ -0.18
LMX1A-202ENST00000342310 EP400Q96L91 3159 aa13.9□□□□□ -0.18
LMX1A-202ENST00000342310 LMO7Q8WWI1 1683 aa13.9□□□□□ -0.18
LMX1A-202ENST00000342310 TLDC2A0PJX2 215 aa13.89□□□□□ -0.19
LMX1A-202ENST00000342310 CFBP00751 764 aa13.89□□□□□ -0.19
LMX1A-202ENST00000342310 GTF2A1P52655 376 aaPredicted RBP13.89□□□□□ -0.19
LMX1A-202ENST00000342310 WHAMMP3Q1A5X7 153 aa13.89□□□□□ -0.19
LMX1A-202ENST00000342310 RRP15Q9Y3B9 282 aaKnown RBP13.89□□□□□ -0.19
LMX1A-202ENST00000342310 POTEB2H3BUK9 544 aa13.89□□□□□ -0.19
LMX1A-202ENST00000342310 STXBP3O00186 592 aa13.89□□□□□ -0.19
LMX1A-202ENST00000342310 CEP104O60308 925 aa13.89□□□□□ -0.19
LMX1A-202ENST00000342310 ACTN1P12814 892 aa13.89□□□□□ -0.19
LMX1A-202ENST00000342310 CCT5P48643 541 aa13.89□□□□□ -0.19
LMX1A-202ENST00000342310 KLHL30Q0D2K2 578 aa13.89□□□□□ -0.19
LMX1A-202ENST00000342310 TAX1BP1Q86VP1 789 aa13.89□□□□□ -0.19
LMX1A-202ENST00000342310 DGKHQ86XP1 1220 aa13.89□□□□□ -0.19
LMX1A-202ENST00000342310 IRF2BP1Q8IU81 584 aa13.89□□□□□ -0.19
LMX1A-202ENST00000342310 PANK4Q9NVE7 773 aa13.89□□□□□ -0.19
LMX1A-202ENST00000342310 CHORDC1Q9UHD1 332 aaPredicted RBP13.89□□□□□ -0.19
LMX1A-202ENST00000342310 PCDHA1Q9Y5I3 950 aa13.89□□□□□ -0.19
LMX1A-202ENST00000342310 LIG3P49916 1009 aa13.89□□□□□ -0.19
LMX1A-202ENST00000342310 BEND6Q5SZJ8 279 aaPredicted RBP13.89□□□□□ -0.19
LMX1A-202ENST00000342310 KCNK18Q7Z418 384 aa13.89□□□□□ -0.19
LMX1A-202ENST00000342310 PIGOQ8TEQ8 1089 aa13.89□□□□□ -0.19
LMX1A-202ENST00000342310 KRT12Q99456 494 aa13.89□□□□□ -0.19
LMX1A-202ENST00000342310 AP1M1Q9BXS5 423 aa13.89□□□□□ -0.19
LMX1A-202ENST00000342310 LIMA1Q9UHB6 759 aaKnown RBP13.89□□□□□ -0.19
LMX1A-202ENST00000342310 DMGDHQ9UI17 866 aaKnown RBP13.89□□□□□ -0.19
LMX1A-202ENST00000342310 POTEFA5A3E0 1075 aa13.88□□□□□ -0.19
LMX1A-202ENST00000342310 KCNK3O14649 394 aa13.88□□□□□ -0.19
LMX1A-202ENST00000342310 POTEIP0CG38 1075 aa13.88□□□□□ -0.19
LMX1A-202ENST00000342310 HERVK_113P62684 666 aa13.88□□□□□ -0.19
LMX1A-202ENST00000342310 ARHGAP44Q17R89 818 aa13.88□□□□□ -0.19
LMX1A-202ENST00000342310 POTEGQ6S5H5 508 aa13.88□□□□□ -0.19
LMX1A-202ENST00000342310 POTEEQ6S8J3 1075 aa13.88□□□□□ -0.19
LMX1A-202ENST00000342310 RSRC2Q7L4I2 434 aaKnown RBP13.88□□□□□ -0.19
LMX1A-202ENST00000342310 CCDC51Q96ER9 411 aa13.88□□□□□ -0.19
LMX1A-202ENST00000342310 PRPF6O94906 941 aaKnown RBP13.88□□□□□ -0.19
LMX1A-202ENST00000342310 MYBL2P10244 700 aa13.88□□□□□ -0.19
LMX1A-202ENST00000342310 TRAPPC10P48553 1259 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms