RNA–Protein interactions for RNA: ENST00000342287.9

PBX3-201, Transcript of PBX homeobox 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene PBX3, Length 2,755 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-201ENST00000342287 MRPL12P52815 198 aaKnown RBP16.47■□□□□ 0.23
PBX3-201ENST00000342287 LUZP1Q86V48 1076 aa16.47■□□□□ 0.23
PBX3-201ENST00000342287 TRPM4Q8TD43 1214 aa16.47■□□□□ 0.23
PBX3-201ENST00000342287 CUL5Q93034 780 aa16.47■□□□□ 0.23
PBX3-201ENST00000342287 HOOK2Q96ED9 719 aa16.47■□□□□ 0.23
PBX3-201ENST00000342287 GLT8D2Q9H1C3 349 aa16.47■□□□□ 0.23
PBX3-201ENST00000342287 VCPKMTQ9H867 229 aa16.47■□□□□ 0.23
PBX3-201ENST00000342287 PCDHA1Q9Y5I3 950 aa16.47■□□□□ 0.23
PBX3-201ENST00000342287 CTNND1O60716 968 aaKnown RBP16.47■□□□□ 0.23
PBX3-201ENST00000342287 ZRANB2O95218 330 aaKnown RBP eCLIP16.47■□□□□ 0.23
PBX3-201ENST00000342287 JAKMIP3Q5VZ66 844 aa16.47■□□□□ 0.23
PBX3-201ENST00000342287 C4orf32Q8N8J7 132 aa16.47■□□□□ 0.23
PBX3-201ENST00000342287 EPS15P42566 896 aa16.46■□□□□ 0.23
PBX3-201ENST00000342287 SMC1AQ14683 1233 aaKnown RBP16.46■□□□□ 0.23
PBX3-201ENST00000342287 NBPF12Q5TAG4 269 aaPredicted RBP16.46■□□□□ 0.23
PBX3-201ENST00000342287 DCAF15Q66K64 600 aa16.46■□□□□ 0.23
PBX3-201ENST00000342287 FOXR1Q6PIV2 292 aa16.46■□□□□ 0.23
PBX3-201ENST00000342287 PSTPIP2Q9H939 334 aa16.46■□□□□ 0.23
PBX3-201ENST00000342287 RNF181Q9P0P0 153 aa16.46■□□□□ 0.23
PBX3-201ENST00000342287 KIAA1468Q9P260 1216 aa16.46■□□□□ 0.23
PBX3-201ENST00000342287 ADAM21Q9UKJ8 722 aa16.46■□□□□ 0.23
PBX3-201ENST00000342287 CAVIN2O95810 425 aa16.46■□□□□ 0.23
PBX3-201ENST00000342287 STAT2P52630 851 aa16.46■□□□□ 0.23
PBX3-201ENST00000342287 LONRF3Q496Y0 759 aa16.46■□□□□ 0.23
PBX3-201ENST00000342287 KIAA1755Q5JYT7 1200 aa16.46■□□□□ 0.23
PBX3-201ENST00000342287 NEK8Q86SG6 692 aa16.46■□□□□ 0.23
PBX3-201ENST00000342287 TBCKQ8TEA7 893 aa16.46■□□□□ 0.23
PBX3-201ENST00000342287 CEP89Q96ST8 783 aa16.46■□□□□ 0.23
PBX3-201ENST00000342287 AMNQ9BXJ7 453 aa16.46■□□□□ 0.23
PBX3-201ENST00000342287 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.46■□□□□ 0.23
PBX3-201ENST00000342287 DICER1Q9UPY3 1922 aaKnown RBP16.45■□□□□ 0.22
PBX3-201ENST00000342287 VWA3AA6NCI4 1184 aa16.45■□□□□ 0.22
PBX3-201ENST00000342287 LAD1O00515 517 aa16.45■□□□□ 0.22
PBX3-201ENST00000342287 YBX3P16989 372 aaKnown RBP eCLIP16.45■□□□□ 0.22
PBX3-201ENST00000342287 MNAT1P51948 309 aa16.45■□□□□ 0.22
PBX3-201ENST00000342287 ANO6Q4KMQ2 910 aa16.45■□□□□ 0.22
PBX3-201ENST00000342287 ELOA2Q8IYF1 753 aaPredicted RBP16.45■□□□□ 0.22
PBX3-201ENST00000342287 CNNM3Q8NE01 707 aa16.45■□□□□ 0.22
PBX3-201ENST00000342287 FAM200AQ8TCP9 573 aa16.45■□□□□ 0.22
PBX3-201ENST00000342287 TMEM260Q9NX78 707 aa16.45■□□□□ 0.22
PBX3-201ENST00000342287 IVLP07476 585 aa16.45■□□□□ 0.22
PBX3-201ENST00000342287 SCP2P22307 547 aa16.45■□□□□ 0.22
PBX3-201ENST00000342287 FAM83BQ5T0W9 1011 aa16.45■□□□□ 0.22
PBX3-201ENST00000342287 POLR2DO15514 142 aaKnown RBP16.44■□□□□ 0.22
PBX3-201ENST00000342287 DDNO94850 711 aaPredicted RBP16.44■□□□□ 0.22
PBX3-201ENST00000342287 ORC2Q13416 577 aaPredicted RBP16.44■□□□□ 0.22
PBX3-201ENST00000342287 STX1AQ16623 288 aa16.44■□□□□ 0.22
PBX3-201ENST00000342287 LETM2Q2VYF4 491 aa16.44■□□□□ 0.22
PBX3-201ENST00000342287 FBXO11Q86XK2 927 aa16.44■□□□□ 0.22
PBX3-201ENST00000342287 CHURC1Q8WUH1 139 aa16.44■□□□□ 0.22
PBX3-201ENST00000342287 PRR12Q9ULL5 1215 aa16.44■□□□□ 0.22
PBX3-201ENST00000342287 CCNT1O60563 726 aaKnown RBP16.44■□□□□ 0.22
PBX3-201ENST00000342287 CLK2P49760 499 aaKnown RBP16.44■□□□□ 0.22
PBX3-201ENST00000342287 HIRAP54198 1017 aaPredicted RBP16.44■□□□□ 0.22
PBX3-201ENST00000342287 NYAP1Q6ZVC0 841 aa16.44■□□□□ 0.22
PBX3-201ENST00000342287 USP49Q70CQ1 688 aa16.44■□□□□ 0.22
PBX3-201ENST00000342287 EPSTI1Q96J88 318 aa16.44■□□□□ 0.22
PBX3-201ENST00000342287 ZNF341Q9BYN7 854 aa16.44■□□□□ 0.22
PBX3-201ENST00000342287 GGA3Q9NZ52 723 aa16.44■□□□□ 0.22
PBX3-201ENST00000342287 HOOK1Q9UJC3 728 aaKnown RBP16.44■□□□□ 0.22
PBX3-201ENST00000342287 PPP2R3BQ9Y5P8 575 aa16.44■□□□□ 0.22
PBX3-201ENST00000342287 PLA2G6O60733 806 aa16.43■□□□□ 0.22
PBX3-201ENST00000342287 LONP1P36776 959 aaKnown RBP16.43■□□□□ 0.22
PBX3-201ENST00000342287 ZRSR1Q15695 479 aaKnown RBP16.43■□□□□ 0.22
PBX3-201ENST00000342287 ZYXQ15942 572 aaKnown RBP16.43■□□□□ 0.22
PBX3-201ENST00000342287 FILIP1Q7Z7B0 1213 aa16.43■□□□□ 0.22
PBX3-201ENST00000342287 SYMPKQ92797 1274 aaKnown RBP16.43■□□□□ 0.22
PBX3-201ENST00000342287 ERCC4Q92889 916 aaPredicted RBP16.43■□□□□ 0.22
PBX3-201ENST00000342287 GLIS2Q9BZE0 524 aaPredicted RBP16.43■□□□□ 0.22
PBX3-201ENST00000342287 ANO10Q9NW15 660 aa16.43■□□□□ 0.22
PBX3-201ENST00000342287 LMOD1P29536 600 aaPredicted RBP16.43■□□□□ 0.22
PBX3-201ENST00000342287 TRAF1Q13077 416 aa16.43■□□□□ 0.22
PBX3-201ENST00000342287 ARID5BQ14865 1188 aa16.43■□□□□ 0.22
PBX3-201ENST00000342287 IL17AQ16552 155 aa16.43■□□□□ 0.22
PBX3-201ENST00000342287 CCDC144BQ3MJ40 725 aa16.43■□□□□ 0.22
PBX3-201ENST00000342287 KANK3Q6NY19 840 aa16.43■□□□□ 0.22
PBX3-201ENST00000342287 DTHD1Q6ZMT9 781 aa16.43■□□□□ 0.22
PBX3-201ENST00000342287 IQUBQ8NA54 791 aa16.43■□□□□ 0.22
PBX3-201ENST00000342287 EXOC4Q96A65 974 aa16.43■□□□□ 0.22
PBX3-201ENST00000342287 CLSTN1O94985 981 aa16.43■□□□□ 0.22
PBX3-201ENST00000342287 PRPHP41219 470 aa16.43■□□□□ 0.22
PBX3-201ENST00000342287 SNAP25P60880 206 aa16.43■□□□□ 0.22
PBX3-201ENST00000342287 MAP9Q49MG5 647 aa16.43■□□□□ 0.22
PBX3-201ENST00000342287 CCDC84Q86UT8 332 aaPredicted RBP16.43■□□□□ 0.22
PBX3-201ENST00000342287 FAM160B2Q86V87 743 aa16.43■□□□□ 0.22
PBX3-201ENST00000342287 SBF1O95248 1867 aa16.42■□□□□ 0.22
PBX3-201ENST00000342287 SASH3O75995 380 aa16.42■□□□□ 0.22
PBX3-201ENST00000342287 SSR1P43307 286 aaKnown RBP16.42■□□□□ 0.22
PBX3-201ENST00000342287 ZNF165P49910 485 aa16.42■□□□□ 0.22
PBX3-201ENST00000342287 UBE2SQ16763 222 aa16.42■□□□□ 0.22
PBX3-201ENST00000342287 C9orf131Q5VYM1 1079 aa16.42■□□□□ 0.22
PBX3-201ENST00000342287 PDILTQ8N807 584 aa16.42■□□□□ 0.22
PBX3-201ENST00000342287 DNAJC25Q9H1X3 360 aa16.42■□□□□ 0.22
PBX3-201ENST00000342287 ADARB2Q9NS39 739 aaKnown RBP16.42■□□□□ 0.22
PBX3-201ENST00000342287 ZNF112Q9UJU3 913 aa16.42■□□□□ 0.22
PBX3-201ENST00000342287 FEM1BQ9UK73 627 aa16.42■□□□□ 0.22
PBX3-201ENST00000342287 TMEM60Q9H2L4 133 aa16.42■□□□□ 0.22
PBX3-201ENST00000342287 SERTAD1Q9UHV2 236 aa16.42■□□□□ 0.22
PBX3-201ENST00000342287 KIF2AO00139 706 aaPredicted RBP16.41■□□□□ 0.22
PBX3-201ENST00000342287 NEMFO60524 1076 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms