RNA–Protein interactions for RNA: ENST00000341852.10

TNIK-202, Transcript of TRAF2 and NCK interacting kinase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNIK, Length 4,727 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIK-202ENST00000341852 SETDB1Q15047 1291 aa16.09■□□□□ 0.17
TNIK-202ENST00000341852 EP400NLQ6ZTU2 488 aa16.09■□□□□ 0.17
TNIK-202ENST00000341852 SMIM5Q71RC9 77 aa16.09■□□□□ 0.17
TNIK-202ENST00000341852 LSM14BQ9BX40 385 aaKnown RBP16.09■□□□□ 0.17
TNIK-202ENST00000341852 LRRC41Q15345 812 aa16.08■□□□□ 0.17
TNIK-202ENST00000341852 AP1ARQ63HQ0 302 aa16.08■□□□□ 0.17
TNIK-202ENST00000341852 SPATA5Q8NB90 893 aa16.08■□□□□ 0.17
TNIK-202ENST00000341852 IFT74Q96LB3 600 aa16.08■□□□□ 0.17
TNIK-202ENST00000341852 EYA3Q99504 573 aa16.08■□□□□ 0.17
TNIK-202ENST00000341852 FOXP1Q9H334 677 aaPredicted RBP16.08■□□□□ 0.17
TNIK-202ENST00000341852 ANKZF1Q9H8Y5 726 aa16.08■□□□□ 0.17
TNIK-202ENST00000341852 COL16A1Q07092 1604 aaPredicted RBP16.08■□□□□ 0.17
TNIK-202ENST00000341852 SNAP23O00161 211 aa16.08■□□□□ 0.16
TNIK-202ENST00000341852 FMNL1O95466 1100 aaPredicted RBP16.08■□□□□ 0.16
TNIK-202ENST00000341852 CALCOCO2Q13137 446 aa16.08■□□□□ 0.16
TNIK-202ENST00000341852 TSGA10IPQ3SY00 556 aa16.08■□□□□ 0.16
TNIK-202ENST00000341852 SYCP3Q8IZU3 236 aa16.08■□□□□ 0.16
TNIK-202ENST00000341852 PACSIN2Q9UNF0 486 aaPredicted RBP16.08■□□□□ 0.16
TNIK-202ENST00000341852 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.08■□□□□ 0.16
TNIK-202ENST00000341852 FAM205CA6NFA0 338 aa16.08■□□□□ 0.16
TNIK-202ENST00000341852 CCDC93Q567U6 631 aa16.08■□□□□ 0.16
TNIK-202ENST00000341852 THOC1Q96FV9 657 aaKnown RBP16.08■□□□□ 0.16
TNIK-202ENST00000341852 MB21D1Q8N884 522 aa16.07■□□□□ 0.16
TNIK-202ENST00000341852 KLC4Q9NSK0 619 aa16.07■□□□□ 0.16
TNIK-202ENST00000341852 DENND2AQ9ULE3 1009 aa16.07■□□□□ 0.16
TNIK-202ENST00000341852 PLAAQ9Y263 795 aa16.07■□□□□ 0.16
TNIK-202ENST00000341852 HERC4Q5GLZ8 1057 aaPredicted RBP16.07■□□□□ 0.16
TNIK-202ENST00000341852 TBC1D9BQ66K14 1250 aa16.07■□□□□ 0.16
TNIK-202ENST00000341852 ZNF804AQ7Z570 1209 aa16.07■□□□□ 0.16
TNIK-202ENST00000341852 MYO1EQ12965 1108 aa16.07■□□□□ 0.16
TNIK-202ENST00000341852 TUBE1Q9UJT0 475 aa16.07■□□□□ 0.16
TNIK-202ENST00000341852 VPS41P49754 854 aa16.07■□□□□ 0.16
TNIK-202ENST00000341852 MXRA7P84157 204 aa16.07■□□□□ 0.16
TNIK-202ENST00000341852 DENND2CQ68D51 928 aa16.07■□□□□ 0.16
TNIK-202ENST00000341852 ARHGEF2Q92974 986 aaKnown RBP16.07■□□□□ 0.16
TNIK-202ENST00000341852 SENP2Q9HC62 589 aa16.07■□□□□ 0.16
TNIK-202ENST00000341852 C6orf50Q9HD87 102 aa16.07■□□□□ 0.16
TNIK-202ENST00000341852 RBM28Q9NW13 759 aaKnown RBP16.07■□□□□ 0.16
TNIK-202ENST00000341852 PCDHA13Q9Y5I0 950 aa16.07■□□□□ 0.16
TNIK-202ENST00000341852 HOOK3Q86VS8 718 aa16.06■□□□□ 0.16
TNIK-202ENST00000341852 ISCA1Q9BUE6 129 aa16.06■□□□□ 0.16
TNIK-202ENST00000341852 EHD2Q9NZN4 543 aa16.06■□□□□ 0.16
TNIK-202ENST00000341852 ZNF609O15014 1411 aa16.06■□□□□ 0.16
TNIK-202ENST00000341852 ATRNO75882 1429 aa16.06■□□□□ 0.16
TNIK-202ENST00000341852 H7C1W4 665 aa16.06■□□□□ 0.16
TNIK-202ENST00000341852 KIF11P52732 1056 aa16.06■□□□□ 0.16
TNIK-202ENST00000341852 DHX9Q08211 1270 aaKnown RBP16.06■□□□□ 0.16
TNIK-202ENST00000341852 NR1I3Q14994 352 aa16.06■□□□□ 0.16
TNIK-202ENST00000341852 INTS5Q6P9B9 1019 aaKnown RBP16.06■□□□□ 0.16
TNIK-202ENST00000341852 RSRC2Q7L4I2 434 aaKnown RBP16.06■□□□□ 0.16
TNIK-202ENST00000341852 CCDC197Q8NCU1 140 aa16.06■□□□□ 0.16
TNIK-202ENST00000341852 TRIM6Q9C030 488 aaPredicted RBP16.06■□□□□ 0.16
TNIK-202ENST00000341852 NKIRAS1Q9NYS0 192 aa16.06■□□□□ 0.16
TNIK-202ENST00000341852 GGT7Q9UJ14 662 aa16.06■□□□□ 0.16
TNIK-202ENST00000341852 TPX2Q9ULW0 747 aaKnown RBP16.06■□□□□ 0.16
TNIK-202ENST00000341852 USP17L12C9JPN9 530 aa16.06■□□□□ 0.16
TNIK-202ENST00000341852 USP17L21D6R901 530 aa16.06■□□□□ 0.16
TNIK-202ENST00000341852 IFNAR1P17181 557 aa16.06■□□□□ 0.16
TNIK-202ENST00000341852 PRCPP42785 496 aa16.06■□□□□ 0.16
TNIK-202ENST00000341852 APBA1Q02410 837 aa16.06■□□□□ 0.16
TNIK-202ENST00000341852 LMNTD2Q8IXW0 634 aa16.06■□□□□ 0.16
TNIK-202ENST00000341852 FAM167BQ9BTA0 163 aa16.06■□□□□ 0.16
TNIK-202ENST00000341852 STMN4Q9H169 189 aaPredicted RBP16.06■□□□□ 0.16
TNIK-202ENST00000341852 ALDH8A1Q9H2A2 487 aaPredicted RBP16.06■□□□□ 0.16
TNIK-202ENST00000341852 GREM2Q9H772 168 aa16.06■□□□□ 0.16
TNIK-202ENST00000341852 SPATS2LQ9NUQ6 558 aaKnown RBP16.06■□□□□ 0.16
TNIK-202ENST00000341852 PDIA6Q15084 440 aa16.06■□□□□ 0.16
TNIK-202ENST00000341852 CNKSR1Q969H4 720 aa16.06■□□□□ 0.16
TNIK-202ENST00000341852 CYP2D7A0A087X1C5 515 aa16.05■□□□□ 0.16
TNIK-202ENST00000341852 PLSCR1O15162 318 aa16.05■□□□□ 0.16
TNIK-202ENST00000341852 TBCAO75347 108 aaKnown RBP16.05■□□□□ 0.16
TNIK-202ENST00000341852 UFL1O94874 794 aa16.05■□□□□ 0.16
TNIK-202ENST00000341852 GYPCP04921 128 aa16.05■□□□□ 0.16
TNIK-202ENST00000341852 ZNF131P52739 623 aa16.05■□□□□ 0.16
TNIK-202ENST00000341852 SLC15A2Q16348 729 aa16.05■□□□□ 0.16
TNIK-202ENST00000341852 ALS2CLQ60I27 953 aa16.05■□□□□ 0.16
TNIK-202ENST00000341852 TBC1D5Q92609 795 aa16.05■□□□□ 0.16
TNIK-202ENST00000341852 AATFQ9NY61 560 aaKnown RBP eCLIP16.05■□□□□ 0.16
TNIK-202ENST00000341852 RWDD2AQ9UIY3 292 aa16.05■□□□□ 0.16
TNIK-202ENST00000341852 MEFVO15553 781 aaPredicted RBP16.05■□□□□ 0.16
TNIK-202ENST00000341852 GOLGA8HP0CJ92 632 aa16.05■□□□□ 0.16
TNIK-202ENST00000341852 PUM3Q15397 648 aaKnown RBP16.05■□□□□ 0.16
TNIK-202ENST00000341852 ZNF658Q5TYW1 1059 aaPredicted RBP16.05■□□□□ 0.16
TNIK-202ENST00000341852 SNX29Q8TEQ0 813 aa16.05■□□□□ 0.16
TNIK-202ENST00000341852 MS4A14Q96JA4 679 aa16.05■□□□□ 0.16
TNIK-202ENST00000341852 GGA1Q9UJY5 639 aa16.05■□□□□ 0.16
TNIK-202ENST00000341852 TCHHQ07283 1943 aa16.05■□□□□ 0.16
TNIK-202ENST00000341852 A0A1B0GTH6 734 aa16.05■□□□□ 0.16
TNIK-202ENST00000341852 EIF3HO15372 352 aaKnown RBP eCLIP16.05■□□□□ 0.16
TNIK-202ENST00000341852 CAMTA2O94983 1202 aa16.05■□□□□ 0.16
TNIK-202ENST00000341852 ZBTB7AO95365 584 aa16.05■□□□□ 0.16
TNIK-202ENST00000341852 EIF6P56537 245 aaKnown RBP16.05■□□□□ 0.16
TNIK-202ENST00000341852 TRIM28Q13263 835 aaKnown RBP16.05■□□□□ 0.16
TNIK-202ENST00000341852 CCNI2Q6ZMN8 369 aaPredicted RBP16.05■□□□□ 0.16
TNIK-202ENST00000341852 RASGRP2Q7LDG7 609 aa16.05■□□□□ 0.16
TNIK-202ENST00000341852 GSTA5Q7RTV2 222 aa16.05■□□□□ 0.16
TNIK-202ENST00000341852 NLRP14Q86W24 1093 aa16.05■□□□□ 0.16
TNIK-202ENST00000341852 U2AF1L4Q8WU68 220 aaKnown RBP16.05■□□□□ 0.16
TNIK-202ENST00000341852 RRP36Q96EU6 259 aaKnown RBP16.05■□□□□ 0.16
TNIK-202ENST00000341852 TRIM7Q9C029 511 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms