RNA–Protein interactions for RNA: ENST00000341421.7

TRAK1-202, Transcript of trafficking kinesin protein 1, humanhuman

TSL 1 (best) BASIC

Gene TRAK1, Length 4,620 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-202ENST00000341421 NSUN4Q96CB9 384 aaKnown RBP12.92□□□□□ -0.34
TRAK1-202ENST00000341421 TACO1Q9BSH4 297 aaKnown RBP12.92□□□□□ -0.34
TRAK1-202ENST00000341421 USP40Q9NVE5 1235 aa12.92□□□□□ -0.34
TRAK1-202ENST00000341421 PANK4Q9NVE7 773 aa12.92□□□□□ -0.34
TRAK1-202ENST00000341421 SUFUQ9UMX1 484 aa12.92□□□□□ -0.34
TRAK1-202ENST00000341421 SAMM50Q9Y512 469 aa12.92□□□□□ -0.34
TRAK1-202ENST00000341421 COBLO75128 1261 aa12.92□□□□□ -0.34
TRAK1-202ENST00000341421 NTSR2O95665 410 aa12.92□□□□□ -0.34
TRAK1-202ENST00000341421 FKBP3Q00688 224 aaKnown RBP12.92□□□□□ -0.34
TRAK1-202ENST00000341421 NCAPHQ15003 741 aa12.92□□□□□ -0.34
TRAK1-202ENST00000341421 BEND6Q5SZJ8 279 aaPredicted RBP12.92□□□□□ -0.34
TRAK1-202ENST00000341421 TC2NQ8N9U0 490 aa12.92□□□□□ -0.34
TRAK1-202ENST00000341421 DYNLL2Q96FJ2 89 aa12.92□□□□□ -0.34
TRAK1-202ENST00000341421 ADD3Q9UEY8 706 aaKnown RBP12.92□□□□□ -0.34
TRAK1-202ENST00000341421 PRCPP42785 496 aa12.92□□□□□ -0.34
TRAK1-202ENST00000341421 DPP8Q6V1X1 898 aaPredicted RBP12.92□□□□□ -0.34
TRAK1-202ENST00000341421 GPBP1Q86WP2 473 aa12.92□□□□□ -0.34
TRAK1-202ENST00000341421 NLRC4Q9NPP4 1024 aa12.92□□□□□ -0.34
TRAK1-202ENST00000341421 LRRC37A3O60309 1634 aa12.92□□□□□ -0.34
TRAK1-202ENST00000341421 CASP1P29466 404 aa12.92□□□□□ -0.34
TRAK1-202ENST00000341421 VSNL1P62760 191 aa12.92□□□□□ -0.34
TRAK1-202ENST00000341421 NCAPH2Q6IBW4 605 aa12.92□□□□□ -0.34
TRAK1-202ENST00000341421 CCDC174Q6PII3 467 aa12.92□□□□□ -0.34
TRAK1-202ENST00000341421 LRRC31Q6UY01 552 aa12.92□□□□□ -0.34
TRAK1-202ENST00000341421 NELFCDQ8IXH7 590 aa12.92□□□□□ -0.34
TRAK1-202ENST00000341421 SYCE1Q8N0S2 351 aa12.92□□□□□ -0.34
TRAK1-202ENST00000341421 SRBD1Q8N5C6 995 aaKnown RBP12.92□□□□□ -0.34
TRAK1-202ENST00000341421 ZNF526Q8TF50 670 aaPredicted RBP12.92□□□□□ -0.34
TRAK1-202ENST00000341421 LRRC45Q96CN5 670 aa12.92□□□□□ -0.34
TRAK1-202ENST00000341421 SH2D4AQ9H788 454 aa12.92□□□□□ -0.34
TRAK1-202ENST00000341421 FAM184BQ9ULE4 1060 aa12.92□□□□□ -0.34
TRAK1-202ENST00000341421 FRMPD2Q68DX3 1309 aaPredicted RBP12.91□□□□□ -0.34
TRAK1-202ENST00000341421 CHUKO15111 745 aa12.91□□□□□ -0.34
TRAK1-202ENST00000341421 CYP2D6P10635 497 aa12.91□□□□□ -0.34
TRAK1-202ENST00000341421 PPP2R5AQ15172 486 aa12.91□□□□□ -0.34
TRAK1-202ENST00000341421 RPS6KA1Q15418 735 aa12.91□□□□□ -0.34
TRAK1-202ENST00000341421 LSM14BQ9BX40 385 aaKnown RBP12.91□□□□□ -0.34
TRAK1-202ENST00000341421 BARHL2Q9NY43 387 aa12.91□□□□□ -0.34
TRAK1-202ENST00000341421 RNF14Q9UBS8 474 aa12.91□□□□□ -0.34
TRAK1-202ENST00000341421 ODF2LQ9ULJ1 636 aa12.91□□□□□ -0.34
TRAK1-202ENST00000341421 TCRBV5S4A2TA0A5A2 114 aa12.91□□□□□ -0.34
TRAK1-202ENST00000341421 USP17L3A6NCW0 530 aa12.91□□□□□ -0.34
TRAK1-202ENST00000341421 USP17L4A6NCW7 530 aa12.91□□□□□ -0.34
TRAK1-202ENST00000341421 MAP2K1Q02750 393 aaPredicted RBP12.91□□□□□ -0.34
TRAK1-202ENST00000341421 CLUL1Q15846 466 aa12.91□□□□□ -0.34
TRAK1-202ENST00000341421 MSL1Q68DK7 614 aa12.91□□□□□ -0.34
TRAK1-202ENST00000341421 USP17L1Q7RTZ2 530 aa12.91□□□□□ -0.34
TRAK1-202ENST00000341421 LRRC47Q8N1G4 583 aaKnown RBP12.91□□□□□ -0.34
TRAK1-202ENST00000341421 CCSER1Q9C0I3 900 aa12.91□□□□□ -0.34
TRAK1-202ENST00000341421 COL5A2P05997 1499 aaPredicted RBP12.91□□□□□ -0.34
TRAK1-202ENST00000341421 ATP2C2O75185 946 aa12.91□□□□□ -0.34
TRAK1-202ENST00000341421 TTLL1O95922 423 aa12.91□□□□□ -0.34
TRAK1-202ENST00000341421 CDK8P49336 464 aa12.91□□□□□ -0.34
TRAK1-202ENST00000341421 OGFOD1Q8N543 542 aa12.91□□□□□ -0.34
TRAK1-202ENST00000341421 PIGSQ96S52 555 aa12.91□□□□□ -0.34
TRAK1-202ENST00000341421 TMEM47Q9BQJ4 181 aa12.91□□□□□ -0.34
TRAK1-202ENST00000341421 VIPAS39Q9H9C1 493 aa12.91□□□□□ -0.34
TRAK1-202ENST00000341421 METTL14Q9HCE5 456 aaKnown RBP12.91□□□□□ -0.34
TRAK1-202ENST00000341421 FAM237AA0A1B0GTK4 181 aa12.9□□□□□ -0.34
TRAK1-202ENST00000341421 ANO9A1A5B4 782 aa12.9□□□□□ -0.34
TRAK1-202ENST00000341421 N4BP1O75113 896 aaKnown RBP12.9□□□□□ -0.34
TRAK1-202ENST00000341421 NHEJ1Q9H9Q4 299 aaPredicted RBP12.9□□□□□ -0.34
TRAK1-202ENST00000341421 ARMCX3Q9UH62 379 aaPredicted RBP12.9□□□□□ -0.34
TRAK1-202ENST00000341421 RGPD8O14715 1765 aaPredicted RBP12.9□□□□□ -0.34
TRAK1-202ENST00000341421 FOSP01100 380 aaPredicted RBP12.9□□□□□ -0.34
TRAK1-202ENST00000341421 STMN4Q9H169 189 aaPredicted RBP12.9□□□□□ -0.34
TRAK1-202ENST00000341421 ARHGEF10LQ9HCE6 1279 aa12.9□□□□□ -0.34
TRAK1-202ENST00000341421 L1RE1Q9UN81 338 aa12.9□□□□□ -0.34
TRAK1-202ENST00000341421 PVALEFA0A1B0GWK0 134 aa12.9□□□□□ -0.34
TRAK1-202ENST00000341421 XRCC5P13010 732 aaKnown RBP12.9□□□□□ -0.34
TRAK1-202ENST00000341421 ALDH1B1P30837 517 aa12.9□□□□□ -0.34
TRAK1-202ENST00000341421 DIXDC1Q155Q3 683 aa12.9□□□□□ -0.34
TRAK1-202ENST00000341421 GSTTP1A0A1W2PQM5 241 aa12.9□□□□□ -0.34
TRAK1-202ENST00000341421 RASGRP2Q7LDG7 609 aa12.9□□□□□ -0.34
TRAK1-202ENST00000341421 NDST4Q9H3R1 872 aa12.9□□□□□ -0.34
TRAK1-202ENST00000341421 TBC1D7Q9P0N9 293 aa12.9□□□□□ -0.34
TRAK1-202ENST00000341421 BZW2Q9Y6E2 419 aaKnown RBP12.9□□□□□ -0.34
TRAK1-202ENST00000341421 ENC1O14682 589 aa12.89□□□□□ -0.35
TRAK1-202ENST00000341421 NMT2O60551 498 aa12.89□□□□□ -0.35
TRAK1-202ENST00000341421 RPS6KA5O75582 802 aa12.89□□□□□ -0.35
TRAK1-202ENST00000341421 APBA1Q02410 837 aa12.89□□□□□ -0.35
TRAK1-202ENST00000341421 RBM26Q5T8P6 1007 aaKnown RBP12.89□□□□□ -0.35
TRAK1-202ENST00000341421 C12orf60Q5U649 245 aa12.89□□□□□ -0.35
TRAK1-202ENST00000341421 USP17L2Q6R6M4 530 aa12.89□□□□□ -0.35
TRAK1-202ENST00000341421 UNC13DQ70J99 1090 aa12.89□□□□□ -0.35
TRAK1-202ENST00000341421 SH3RF3Q8TEJ3 882 aaPredicted RBP12.89□□□□□ -0.35
TRAK1-202ENST00000341421 CTNNBL1Q8WYA6 563 aaPredicted RBP12.89□□□□□ -0.35
TRAK1-202ENST00000341421 ZNF219Q9P2Y4 722 aaPredicted RBP12.89□□□□□ -0.35
TRAK1-202ENST00000341421 LMO7Q8WWI1 1683 aa12.89□□□□□ -0.35
TRAK1-202ENST00000341421 MAP2K7O14733 419 aa12.89□□□□□ -0.35
TRAK1-202ENST00000341421 N4BP2L2Q92802 583 aaPredicted RBP12.89□□□□□ -0.35
TRAK1-202ENST00000341421 SERPINB13Q9UIV8 391 aa12.89□□□□□ -0.35
TRAK1-202ENST00000341421 TROAPQ12815 778 aa12.89□□□□□ -0.35
TRAK1-202ENST00000341421 USP49Q70CQ1 688 aa12.89□□□□□ -0.35
TRAK1-202ENST00000341421 DONSONQ9NYP3 566 aa12.89□□□□□ -0.35
TRAK1-202ENST00000341421 CNTNAP5Q8WYK1 1306 aa12.89□□□□□ -0.35
TRAK1-202ENST00000341421 PPP4R3AQ6IN85 833 aa12.89□□□□□ -0.35
TRAK1-202ENST00000341421 RUFY4Q6ZNE9 571 aa12.89□□□□□ -0.35
TRAK1-202ENST00000341421 DDX12PQ92771 950 aa12.89□□□□□ -0.35
TRAK1-202ENST00000341421 MRPL44Q9H9J2 332 aaKnown RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms