RNA–Protein interactions for RNA: ENST00000341372.7

TPM3-207, Transcript of tropomyosin 3, humanhuman

TSL 5 BASIC

Gene TPM3, Length 2,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-207ENST00000341372 FAM160B2Q86V87 743 aa12.01□□□□□ -0.49
TPM3-207ENST00000341372 RAET1EQ8TD07 263 aa12.01□□□□□ -0.49
TPM3-207ENST00000341372 TNKSO95271 1327 aa12□□□□□ -0.49
TPM3-207ENST00000341372 GRK4P32298 578 aa12□□□□□ -0.49
TPM3-207ENST00000341372 STAT2P52630 851 aa12□□□□□ -0.49
TPM3-207ENST00000341372 GRB14Q14449 540 aa12□□□□□ -0.49
TPM3-207ENST00000341372 LYPD8Q6UX82 237 aa12□□□□□ -0.49
TPM3-207ENST00000341372 RASGRP2Q7LDG7 609 aa12□□□□□ -0.49
TPM3-207ENST00000341372 RIOX2Q8IUF8 465 aa12□□□□□ -0.49
TPM3-207ENST00000341372 ENAHQ8N8S7 591 aaPredicted RBP12□□□□□ -0.49
TPM3-207ENST00000341372 ZSCAN10Q96SZ4 725 aaPredicted RBP12□□□□□ -0.49
TPM3-207ENST00000341372 SLC38A10Q9HBR0 1119 aa12□□□□□ -0.49
TPM3-207ENST00000341372 EPB41L3Q9Y2J2 1087 aaPredicted RBP12□□□□□ -0.49
TPM3-207ENST00000341372 SORBS3O60504 671 aa11.99□□□□□ -0.49
TPM3-207ENST00000341372 PDHBP11177 359 aa11.99□□□□□ -0.49
TPM3-207ENST00000341372 XRCC5P13010 732 aaKnown RBP11.99□□□□□ -0.49
TPM3-207ENST00000341372 PTPREP23469 700 aa11.99□□□□□ -0.49
TPM3-207ENST00000341372 MCCP23508 829 aa11.99□□□□□ -0.49
TPM3-207ENST00000341372 COPB2P35606 906 aa11.99□□□□□ -0.49
TPM3-207ENST00000341372 OAZ1P54368 228 aa11.99□□□□□ -0.49
TPM3-207ENST00000341372 TRDNQ13061 729 aa11.99□□□□□ -0.49
TPM3-207ENST00000341372 SEC23AQ15436 765 aa11.99□□□□□ -0.49
TPM3-207ENST00000341372 BTNL9Q6UXG8 535 aa11.99□□□□□ -0.49
TPM3-207ENST00000341372 CYB5R4Q7L1T6 521 aa11.99□□□□□ -0.49
TPM3-207ENST00000341372 NUDT12Q9BQG2 462 aa11.99□□□□□ -0.49
TPM3-207ENST00000341372 ZKSCAN3Q9BRR0 538 aa11.99□□□□□ -0.49
TPM3-207ENST00000341372 CENPFP49454 3210 aa11.99□□□□□ -0.49
TPM3-207ENST00000341372 SLC15A5A6NIM6 579 aa11.99□□□□□ -0.49
TPM3-207ENST00000341372 CCDC85CA6NKD9 419 aa11.99□□□□□ -0.49
TPM3-207ENST00000341372 TMEM232C9JQI7 657 aa11.99□□□□□ -0.49
TPM3-207ENST00000341372 SLC27A2O14975 620 aa11.99□□□□□ -0.49
TPM3-207ENST00000341372 ADCY3O60266 1144 aa11.99□□□□□ -0.49
TPM3-207ENST00000341372 SLC25A27O95847 323 aa11.99□□□□□ -0.49
TPM3-207ENST00000341372 HOXC6P09630 235 aa11.99□□□□□ -0.49
TPM3-207ENST00000341372 CREB3L3Q68CJ9 461 aa11.99□□□□□ -0.49
TPM3-207ENST00000341372 NBPF11Q86T75 865 aa11.99□□□□□ -0.49
TPM3-207ENST00000341372 MB21D2Q8IYB1 491 aaPredicted RBP11.99□□□□□ -0.49
TPM3-207ENST00000341372 ABRAQ8N0Z2 381 aa11.99□□□□□ -0.49
TPM3-207ENST00000341372 NCOA7Q8NI08 942 aa11.99□□□□□ -0.49
TPM3-207ENST00000341372 SH3TC2Q8TF17 1288 aa11.99□□□□□ -0.49
TPM3-207ENST00000341372 CHURC1Q8WUH1 139 aa11.99□□□□□ -0.49
TPM3-207ENST00000341372 MROH8Q9H579 483 aa11.99□□□□□ -0.49
TPM3-207ENST00000341372 DESI1Q6ICB0 168 aa11.98□□□□□ -0.49
TPM3-207ENST00000341372 RALYLQ86SE5 291 aaKnown RBP11.98□□□□□ -0.49
TPM3-207ENST00000341372 RETREG3Q86VR2 466 aa11.98□□□□□ -0.49
TPM3-207ENST00000341372 CCAR1Q8IX12 1150 aaKnown RBP11.98□□□□□ -0.49
TPM3-207ENST00000341372 APBA2Q99767 749 aa11.98□□□□□ -0.49
TPM3-207ENST00000341372 UBAC1Q9BSL1 405 aa11.98□□□□□ -0.49
TPM3-207ENST00000341372 MTA3Q9BTC8 594 aa11.98□□□□□ -0.49
TPM3-207ENST00000341372 TEX13BQ9BXU2 312 aa11.98□□□□□ -0.49
TPM3-207ENST00000341372 OSBPL2Q9H1P3 480 aa11.98□□□□□ -0.49
TPM3-207ENST00000341372 COLQQ9Y215 455 aaPredicted RBP11.98□□□□□ -0.49
TPM3-207ENST00000341372 NOD1Q9Y239 953 aa11.98□□□□□ -0.49
TPM3-207ENST00000341372 MRPL42Q9Y6G3 142 aaKnown RBP11.98□□□□□ -0.49
TPM3-207ENST00000341372 ZNFX1Q9P2E3 1918 aaKnown RBP11.98□□□□□ -0.49
TPM3-207ENST00000341372 STRNO43815 780 aa11.98□□□□□ -0.49
TPM3-207ENST00000341372 PRPF40AO75400 957 aaKnown RBP11.98□□□□□ -0.49
TPM3-207ENST00000341372 STAT3P40763 770 aa11.98□□□□□ -0.49
TPM3-207ENST00000341372 RGS2P41220 211 aa11.98□□□□□ -0.49
TPM3-207ENST00000341372 ANTXR2P58335 489 aa11.98□□□□□ -0.49
TPM3-207ENST00000341372 ZNF543Q08ER8 600 aa11.98□□□□□ -0.49
TPM3-207ENST00000341372 GNL2Q13823 731 aaKnown RBP11.98□□□□□ -0.49
TPM3-207ENST00000341372 BMS1Q14692 1282 aaKnown RBP11.98□□□□□ -0.49
TPM3-207ENST00000341372 MAP7D1Q3KQU3 841 aa11.98□□□□□ -0.49
TPM3-207ENST00000341372 KCTD1Q719H9 257 aa11.98□□□□□ -0.49
TPM3-207ENST00000341372 KIFC2Q96AC6 838 aa11.98□□□□□ -0.49
TPM3-207ENST00000341372 OCSTAMPQ9BR26 566 aa11.98□□□□□ -0.49
TPM3-207ENST00000341372 VTI1BQ9UEU0 232 aa11.98□□□□□ -0.49
TPM3-207ENST00000341372 EPB41L2O43491 1005 aaKnown RBP11.97□□□□□ -0.49
TPM3-207ENST00000341372 ZBED4O75132 1171 aa11.97□□□□□ -0.49
TPM3-207ENST00000341372 IGHA2P01877 340 aa11.97□□□□□ -0.49
TPM3-207ENST00000341372 HMGCRP04035 888 aa11.97□□□□□ -0.49
TPM3-207ENST00000341372 MAPK8P45983 427 aa11.97□□□□□ -0.49
TPM3-207ENST00000341372 RGS19P49795 217 aa11.97□□□□□ -0.49
TPM3-207ENST00000341372 DAB2P98082 770 aa11.97□□□□□ -0.49
TPM3-207ENST00000341372 PLS1Q14651 629 aa11.97□□□□□ -0.49
TPM3-207ENST00000341372 CCDC96Q2M329 555 aa11.97□□□□□ -0.49
TPM3-207ENST00000341372 GPATCH4Q5T3I0 446 aaKnown RBP11.97□□□□□ -0.49
TPM3-207ENST00000341372 EXOC8Q8IYI6 725 aa11.97□□□□□ -0.49
TPM3-207ENST00000341372 TRMT44Q8IYL2 757 aaKnown RBP11.97□□□□□ -0.49
TPM3-207ENST00000341372 KAT14Q9H8E8 782 aa11.97□□□□□ -0.49
TPM3-207ENST00000341372 PRR12Q9ULL5 1215 aa11.97□□□□□ -0.49
TPM3-207ENST00000341372 PLXNA1Q9UIW2 1896 aa11.97□□□□□ -0.49
TPM3-207ENST00000341372 ZNF536O15090 1300 aa11.97□□□□□ -0.49
TPM3-207ENST00000341372 ELNP15502 786 aa11.96□□□□□ -0.49
TPM3-207ENST00000341372 DSC3Q14574 896 aa11.96□□□□□ -0.49
TPM3-207ENST00000341372 RNF20Q5VTR2 975 aa11.96□□□□□ -0.49
TPM3-207ENST00000341372 TRIB2Q92519 343 aa11.96□□□□□ -0.49
TPM3-207ENST00000341372 RANBP17Q9H2T7 1088 aaKnown RBP11.96□□□□□ -0.49
TPM3-207ENST00000341372 RBM19Q9Y4C8 960 aaKnown RBP11.96□□□□□ -0.49
TPM3-207ENST00000341372 INHAP05111 366 aa11.96□□□□□ -0.5
TPM3-207ENST00000341372 CYP2B6P20813 491 aa11.96□□□□□ -0.5
TPM3-207ENST00000341372 ADORA2AP29274 412 aa11.96□□□□□ -0.5
TPM3-207ENST00000341372 UBXN2AP68543 259 aa11.96□□□□□ -0.5
TPM3-207ENST00000341372 IFIT1BQ5T764 474 aaKnown RBP11.96□□□□□ -0.5
TPM3-207ENST00000341372 MAP3K21Q5TCX8 1036 aa11.96□□□□□ -0.5
TPM3-207ENST00000341372 WDR78Q5VTH9 848 aa11.96□□□□□ -0.5
TPM3-207ENST00000341372 ASTLQ6HA08 431 aaPredicted RBP11.96□□□□□ -0.5
TPM3-207ENST00000341372 SNRNP48Q6IEG0 339 aaKnown RBP11.96□□□□□ -0.5
TPM3-207ENST00000341372 TTBK2Q6IQ55 1244 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms