RNA–Protein interactions for RNA: ENST00000341360.6

ATP2B4-201, Transcript of ATPase plasma membrane Ca2+ transporting 4, humanhuman

TSL 1 (best) BASIC

Gene ATP2B4, Length 4,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B4-201ENST00000341360 PRPF3O43395 683 aaKnown RBP8.44□□□□□ -1.06
ATP2B4-201ENST00000341360 MTX1Q13505 466 aa8.44□□□□□ -1.06
ATP2B4-201ENST00000341360 SLC39A14Q15043 492 aa8.44□□□□□ -1.06
ATP2B4-201ENST00000341360 RINT1Q6NUQ1 792 aa8.44□□□□□ -1.06
ATP2B4-201ENST00000341360 BRINP3Q76B58 766 aa8.44□□□□□ -1.06
ATP2B4-201ENST00000341360 C17orf53Q8N3J3 647 aaPredicted RBP8.44□□□□□ -1.06
ATP2B4-201ENST00000341360 RNF14Q9UBS8 474 aa8.44□□□□□ -1.06
ATP2B4-201ENST00000341360 DBNLQ9UJU6 430 aaKnown RBP8.44□□□□□ -1.06
ATP2B4-201ENST00000341360 ABCA9Q8IUA7 1624 aa8.44□□□□□ -1.06
ATP2B4-201ENST00000341360 SHPRHQ149N8 1683 aa8.44□□□□□ -1.06
ATP2B4-201ENST00000341360 KCNJ18B7U540 433 aa8.44□□□□□ -1.06
ATP2B4-201ENST00000341360 MED7O43513 233 aa8.44□□□□□ -1.06
ATP2B4-201ENST00000341360 ATP8B1O43520 1251 aa8.44□□□□□ -1.06
ATP2B4-201ENST00000341360 SRGAP2BP0DMP2 458 aa8.44□□□□□ -1.06
ATP2B4-201ENST00000341360 CAPN2P17655 700 aa8.44□□□□□ -1.06
ATP2B4-201ENST00000341360 MORC3Q14149 939 aa8.44□□□□□ -1.06
ATP2B4-201ENST00000341360 KCNJ12Q14500 433 aa8.44□□□□□ -1.06
ATP2B4-201ENST00000341360 ME3Q16798 604 aa8.44□□□□□ -1.06
ATP2B4-201ENST00000341360 DOK7Q18PE1 504 aa8.44□□□□□ -1.06
ATP2B4-201ENST00000341360 SYDE2Q5VT97 1194 aa8.44□□□□□ -1.06
ATP2B4-201ENST00000341360 CCDC105Q8IYK2 499 aa8.44□□□□□ -1.06
ATP2B4-201ENST00000341360 LARP4BQ92615 738 aaKnown RBP8.44□□□□□ -1.06
ATP2B4-201ENST00000341360 SEC62Q99442 399 aaKnown RBP8.44□□□□□ -1.06
ATP2B4-201ENST00000341360 MYL10Q9BUA6 226 aa8.44□□□□□ -1.06
ATP2B4-201ENST00000341360 KIAA1586Q9HCI6 787 aa8.44□□□□□ -1.06
ATP2B4-201ENST00000341360 NUB1Q9Y5A7 615 aa8.44□□□□□ -1.06
ATP2B4-201ENST00000341360 CHD1O14646 1710 aa8.44□□□□□ -1.06
ATP2B4-201ENST00000341360 LDHAP00338 332 aaKnown RBP8.44□□□□□ -1.06
ATP2B4-201ENST00000341360 PSAPP07602 524 aa8.44□□□□□ -1.06
ATP2B4-201ENST00000341360 CPA1P15085 419 aa8.44□□□□□ -1.06
ATP2B4-201ENST00000341360 PDIA3P30101 505 aaKnown RBP8.44□□□□□ -1.06
ATP2B4-201ENST00000341360 JAK3P52333 1124 aa8.44□□□□□ -1.06
ATP2B4-201ENST00000341360 TRIM28Q13263 835 aaKnown RBP8.44□□□□□ -1.06
ATP2B4-201ENST00000341360 POLA2Q14181 598 aa8.44□□□□□ -1.06
ATP2B4-201ENST00000341360 PLCB4Q15147 1175 aa8.44□□□□□ -1.06
ATP2B4-201ENST00000341360 LRRC24Q50LG9 513 aa8.44□□□□□ -1.06
ATP2B4-201ENST00000341360 SH2D4BQ5SQS7 431 aa8.44□□□□□ -1.06
ATP2B4-201ENST00000341360 NELFCDQ8IXH7 590 aa8.44□□□□□ -1.06
ATP2B4-201ENST00000341360 LRRC47Q8N1G4 583 aaKnown RBP8.44□□□□□ -1.06
ATP2B4-201ENST00000341360 TTC1Q99614 292 aa8.44□□□□□ -1.06
ATP2B4-201ENST00000341360 PSMC2P35998 433 aaKnown RBP8.43□□□□□ -1.06
ATP2B4-201ENST00000341360 NSFP46459 744 aaKnown RBP8.43□□□□□ -1.06
ATP2B4-201ENST00000341360 PRKG1Q13976 671 aa8.43□□□□□ -1.06
ATP2B4-201ENST00000341360 KRT81Q14533 505 aa8.43□□□□□ -1.06
ATP2B4-201ENST00000341360 CCHCR1Q8TD31 782 aa8.43□□□□□ -1.06
ATP2B4-201ENST00000341360 RSAD2Q8WXG1 361 aa8.43□□□□□ -1.06
ATP2B4-201ENST00000341360 MED10Q9BTT4 135 aa8.43□□□□□ -1.06
ATP2B4-201ENST00000341360 VCXQ9H320 206 aa8.43□□□□□ -1.06
ATP2B4-201ENST00000341360 HOMER3Q9NSC5 361 aa8.43□□□□□ -1.06
ATP2B4-201ENST00000341360 PYCARDQ9ULZ3 195 aa8.43□□□□□ -1.06
ATP2B4-201ENST00000341360 ADGRB1O14514 1584 aa8.43□□□□□ -1.06
ATP2B4-201ENST00000341360 ZC3H13Q5T200 1668 aaKnown RBP8.43□□□□□ -1.06
ATP2B4-201ENST00000341360 CFAP65Q6ZU64 1925 aaKnown RBP8.43□□□□□ -1.06
ATP2B4-201ENST00000341360 LRRIQ4A6NIV6 560 aa8.43□□□□□ -1.06
ATP2B4-201ENST00000341360 RPN1P04843 607 aaKnown RBP8.43□□□□□ -1.06
ATP2B4-201ENST00000341360 ZSCAN20P17040 1043 aaPredicted RBP8.43□□□□□ -1.06
ATP2B4-201ENST00000341360 HOXD10P28358 340 aa8.43□□□□□ -1.06
ATP2B4-201ENST00000341360 RASSF2P50749 326 aa8.43□□□□□ -1.06
ATP2B4-201ENST00000341360 SCNN1DP51172 638 aa8.43□□□□□ -1.06
ATP2B4-201ENST00000341360 IRX4P78413 519 aa8.43□□□□□ -1.06
ATP2B4-201ENST00000341360 FKBP3Q00688 224 aaKnown RBP8.43□□□□□ -1.06
ATP2B4-201ENST00000341360 GABPAQ06546 454 aa8.43□□□□□ -1.06
ATP2B4-201ENST00000341360 HHATQ5VTY9 493 aa8.43□□□□□ -1.06
ATP2B4-201ENST00000341360 RRAGAQ7L523 313 aa8.43□□□□□ -1.06
ATP2B4-201ENST00000341360 C2orf69Q8N8R5 385 aa8.43□□□□□ -1.06
ATP2B4-201ENST00000341360 GTF3C2Q8WUA4 911 aaPredicted RBP8.43□□□□□ -1.06
ATP2B4-201ENST00000341360 SDR42E1Q8WUS8 393 aa8.43□□□□□ -1.06
ATP2B4-201ENST00000341360 TSC1Q92574 1164 aa8.43□□□□□ -1.06
ATP2B4-201ENST00000341360 STMN2Q93045 179 aa8.43□□□□□ -1.06
ATP2B4-201ENST00000341360 ZNF577Q9BSK1 485 aa8.43□□□□□ -1.06
ATP2B4-201ENST00000341360 LSM14BQ9BX40 385 aaKnown RBP8.43□□□□□ -1.06
ATP2B4-201ENST00000341360 HOXC10Q9NYD6 342 aa8.43□□□□□ -1.06
ATP2B4-201ENST00000341360 PPRC1Q5VV67 1664 aaKnown RBP8.43□□□□□ -1.06
ATP2B4-201ENST00000341360 IQCA1LA6NCM1 817 aa8.43□□□□□ -1.06
ATP2B4-201ENST00000341360 IKBKBO14920 756 aa8.43□□□□□ -1.06
ATP2B4-201ENST00000341360 KCNQ3O43525 872 aa8.43□□□□□ -1.06
ATP2B4-201ENST00000341360 USP17L8P0C7I0 530 aa8.43□□□□□ -1.06
ATP2B4-201ENST00000341360 TPD52P55327 224 aaPredicted RBP8.43□□□□□ -1.06
ATP2B4-201ENST00000341360 PRPSAP1Q14558 356 aa8.43□□□□□ -1.06
ATP2B4-201ENST00000341360 LRRC8AQ8IWT6 810 aa8.43□□□□□ -1.06
ATP2B4-201ENST00000341360 CDKL2Q92772 493 aa8.43□□□□□ -1.06
ATP2B4-201ENST00000341360 DDX17Q92841 729 aaKnown RBP8.43□□□□□ -1.06
ATP2B4-201ENST00000341360 ZNF341Q9BYN7 854 aa8.43□□□□□ -1.06
ATP2B4-201ENST00000341360 CCDC68Q9H2F9 335 aa8.43□□□□□ -1.06
ATP2B4-201ENST00000341360 FAM8A1Q9UBU6 413 aa8.43□□□□□ -1.06
ATP2B4-201ENST00000341360 MMP14P50281 582 aa8.42□□□□□ -1.06
ATP2B4-201ENST00000341360 ASPHQ12797 758 aa8.42□□□□□ -1.06
ATP2B4-201ENST00000341360 ADAM9Q13443 819 aa8.42□□□□□ -1.06
ATP2B4-201ENST00000341360 BRD3Q15059 726 aa8.42□□□□□ -1.06
ATP2B4-201ENST00000341360 SLFNL1Q499Z3 407 aa8.42□□□□□ -1.06
ATP2B4-201ENST00000341360 ARMCX2Q7L311 632 aa8.42□□□□□ -1.06
ATP2B4-201ENST00000341360 EFCAB13Q8IY85 973 aa8.42□□□□□ -1.06
ATP2B4-201ENST00000341360 LRFN2Q9ULH4 789 aa8.42□□□□□ -1.06
ATP2B4-201ENST00000341360 RIPOR2Q9Y4F9 1068 aa8.42□□□□□ -1.06
ATP2B4-201ENST00000341360 PNMA6FA0A0J9YX94 578 aa8.42□□□□□ -1.06
ATP2B4-201ENST00000341360 HNRNPDLO14979 420 aaKnown RBP8.42□□□□□ -1.06
ATP2B4-201ENST00000341360 GARSP41250 739 aaKnown RBP8.42□□□□□ -1.06
ATP2B4-201ENST00000341360 TECP42680 631 aa8.42□□□□□ -1.06
ATP2B4-201ENST00000341360 KPNA2P52292 529 aaKnown RBP8.42□□□□□ -1.06
ATP2B4-201ENST00000341360 EXOC3L4Q17RC7 722 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms