RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 CASKIN2Q8WXE0 1202 aa10.6□□□□□ -0.71
PTCHD4-201ENST00000339488 CHMP6Q96FZ7 201 aa10.6□□□□□ -0.71
PTCHD4-201ENST00000339488 RPGRIP1Q96KN7 1286 aa10.6□□□□□ -0.71
PTCHD4-201ENST00000339488 TRAIPQ9BWF2 469 aa10.6□□□□□ -0.71
PTCHD4-201ENST00000339488 DMAP1Q9NPF5 467 aaPredicted RBP10.6□□□□□ -0.71
PTCHD4-201ENST00000339488 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.6□□□□□ -0.71
PTCHD4-201ENST00000339488 TSKSQ9UJT2 592 aa10.6□□□□□ -0.71
PTCHD4-201ENST00000339488 ZNF711Q9Y462 761 aa10.6□□□□□ -0.71
PTCHD4-201ENST00000339488 SH3TC1Q8TE82 1336 aa10.6□□□□□ -0.71
PTCHD4-201ENST00000339488 PDLIM1O00151 329 aa10.6□□□□□ -0.71
PTCHD4-201ENST00000339488 USO1O60763 962 aaKnown RBP10.6□□□□□ -0.71
PTCHD4-201ENST00000339488 FLOT1O75955 427 aa10.6□□□□□ -0.71
PTCHD4-201ENST00000339488 ZCCHC18P0CG32 403 aa10.6□□□□□ -0.71
PTCHD4-201ENST00000339488 ATP6V1C1P21283 382 aa10.6□□□□□ -0.71
PTCHD4-201ENST00000339488 KCNA3P22001 575 aa10.6□□□□□ -0.71
PTCHD4-201ENST00000339488 PBX1P40424 430 aa10.6□□□□□ -0.71
PTCHD4-201ENST00000339488 PSMC4P43686 418 aa10.6□□□□□ -0.71
PTCHD4-201ENST00000339488 PPP2R2AP63151 447 aa10.6□□□□□ -0.71
PTCHD4-201ENST00000339488 LACTBP83111 547 aaPredicted RBP10.6□□□□□ -0.71
PTCHD4-201ENST00000339488 LBRQ14739 615 aaKnown RBP10.6□□□□□ -0.71
PTCHD4-201ENST00000339488 DDX42Q86XP3 938 aaKnown RBP eCLIP10.6□□□□□ -0.71
PTCHD4-201ENST00000339488 ZBTB8BQ8NAP8 495 aaPredicted RBP10.6□□□□□ -0.71
PTCHD4-201ENST00000339488 AGBL1Q96MI9 1066 aa10.6□□□□□ -0.71
PTCHD4-201ENST00000339488 SELENOSQ9BQE4 189 aa10.6□□□□□ -0.71
PTCHD4-201ENST00000339488 ZNHIT6Q9NWK9 470 aaKnown RBP10.6□□□□□ -0.71
PTCHD4-201ENST00000339488 INTUQ9ULD6 942 aa10.6□□□□□ -0.71
PTCHD4-201ENST00000339488 PAIP2BQ9ULR5 123 aaKnown RBP10.6□□□□□ -0.71
PTCHD4-201ENST00000339488 HEY1Q9Y5J3 304 aa10.6□□□□□ -0.71
PTCHD4-201ENST00000339488 COL15A1P39059 1388 aa10.6□□□□□ -0.71
PTCHD4-201ENST00000339488 CFAP73A6NFT4 308 aa10.59□□□□□ -0.71
PTCHD4-201ENST00000339488 F8VZ95 297 aa10.59□□□□□ -0.71
PTCHD4-201ENST00000339488 ORC4O43929 436 aa10.59□□□□□ -0.71
PTCHD4-201ENST00000339488 YEATS4O95619 227 aa10.59□□□□□ -0.71
PTCHD4-201ENST00000339488 CYP21A2P08686 494 aa10.59□□□□□ -0.71
PTCHD4-201ENST00000339488 XBP1P17861 261 aa10.59□□□□□ -0.71
PTCHD4-201ENST00000339488 CACNA2D1P54289 1103 aa10.59□□□□□ -0.71
PTCHD4-201ENST00000339488 IFI16Q16666 785 aaKnown RBP10.59□□□□□ -0.71
PTCHD4-201ENST00000339488 CCDC92Q53HC0 331 aaPredicted RBP10.59□□□□□ -0.71
PTCHD4-201ENST00000339488 KRT26Q7Z3Y9 468 aa10.59□□□□□ -0.71
PTCHD4-201ENST00000339488 FBF1Q8TES7 1133 aa10.59□□□□□ -0.71
PTCHD4-201ENST00000339488 USP33Q8TEY7 942 aa10.59□□□□□ -0.71
PTCHD4-201ENST00000339488 CLMNQ96JQ2 1002 aa10.59□□□□□ -0.71
PTCHD4-201ENST00000339488 POLR3EQ9NVU0 708 aa10.59□□□□□ -0.71
PTCHD4-201ENST00000339488 KDM6AO15550 1401 aaPredicted RBP10.59□□□□□ -0.71
PTCHD4-201ENST00000339488 MAP3K5Q99683 1374 aa10.59□□□□□ -0.71
PTCHD4-201ENST00000339488 CHD2O14647 1828 aaKnown RBP10.59□□□□□ -0.71
PTCHD4-201ENST00000339488 EIF3FO00303 357 aaPredicted RBP10.59□□□□□ -0.71
PTCHD4-201ENST00000339488 TMCC1O94876 653 aa10.59□□□□□ -0.71
PTCHD4-201ENST00000339488 MOCS3O95396 460 aa10.59□□□□□ -0.71
PTCHD4-201ENST00000339488 GM2AP17900 193 aa10.59□□□□□ -0.71
PTCHD4-201ENST00000339488 VARSP26640 1264 aaKnown RBP10.59□□□□□ -0.71
PTCHD4-201ENST00000339488 RASSF7Q02833 373 aa10.59□□□□□ -0.71
PTCHD4-201ENST00000339488 ZNF844Q08AG5 666 aa10.59□□□□□ -0.71
PTCHD4-201ENST00000339488 FLIIQ13045 1269 aa10.59□□□□□ -0.71
PTCHD4-201ENST00000339488 SGSM1Q2NKQ1 1148 aa10.59□□□□□ -0.71
PTCHD4-201ENST00000339488 CCDC38Q502W7 563 aa10.59□□□□□ -0.71
PTCHD4-201ENST00000339488 ZNF362Q5T0B9 420 aaPredicted RBP10.59□□□□□ -0.71
PTCHD4-201ENST00000339488 AACSQ86V21 672 aa10.59□□□□□ -0.71
PTCHD4-201ENST00000339488 ARFGAP2Q8N6H7 521 aa10.59□□□□□ -0.71
PTCHD4-201ENST00000339488 ANKRD13CQ8N6S4 541 aa10.59□□□□□ -0.71
PTCHD4-201ENST00000339488 TRIML1Q8N9V2 468 aa10.59□□□□□ -0.71
PTCHD4-201ENST00000339488 ENOX1Q8TC92 643 aaKnown RBP10.59□□□□□ -0.71
PTCHD4-201ENST00000339488 GBP5Q96PP8 586 aa10.59□□□□□ -0.71
PTCHD4-201ENST00000339488 ZRANB1Q9UGI0 708 aa10.59□□□□□ -0.71
PTCHD4-201ENST00000339488 SERTAD1Q9UHV2 236 aa10.59□□□□□ -0.71
PTCHD4-201ENST00000339488 KCNH3Q9ULD8 1083 aa10.59□□□□□ -0.71
PTCHD4-201ENST00000339488 IQSEC3Q9UPP2 1182 aaPredicted RBP10.59□□□□□ -0.71
PTCHD4-201ENST00000339488 MYH7P12883 1935 aa10.59□□□□□ -0.71
PTCHD4-201ENST00000339488 TMEM131LA2VDJ0 1609 aa10.59□□□□□ -0.71
PTCHD4-201ENST00000339488 AFF2P51816 1311 aa10.59□□□□□ -0.71
PTCHD4-201ENST00000339488 GNAT2P19087 354 aa10.59□□□□□ -0.71
PTCHD4-201ENST00000339488 NFKBIAP25963 317 aa10.59□□□□□ -0.71
PTCHD4-201ENST00000339488 HOXD12P35452 270 aa10.59□□□□□ -0.71
PTCHD4-201ENST00000339488 HSD17B3P37058 310 aa10.59□□□□□ -0.71
PTCHD4-201ENST00000339488 MLH1P40692 756 aa10.59□□□□□ -0.71
PTCHD4-201ENST00000339488 TEFQ10587 303 aa10.59□□□□□ -0.71
PTCHD4-201ENST00000339488 MYBPC2Q14324 1141 aa10.59□□□□□ -0.71
PTCHD4-201ENST00000339488 MUM1Q2TAK8 710 aa10.59□□□□□ -0.71
PTCHD4-201ENST00000339488 ZC3H18Q86VM9 953 aaKnown RBP10.59□□□□□ -0.71
PTCHD4-201ENST00000339488 ANKS4BQ8N8V4 417 aa10.59□□□□□ -0.71
PTCHD4-201ENST00000339488 SMYD1Q8NB12 490 aa10.59□□□□□ -0.71
PTCHD4-201ENST00000339488 TTC8Q8TAM2 541 aa10.59□□□□□ -0.71
PTCHD4-201ENST00000339488 NEK9Q8TD19 979 aa10.59□□□□□ -0.71
PTCHD4-201ENST00000339488 SSH3Q8TE77 659 aa10.59□□□□□ -0.71
PTCHD4-201ENST00000339488 UBLCP1Q8WVY7 318 aaPredicted RBP10.59□□□□□ -0.71
PTCHD4-201ENST00000339488 PHF12Q96QT6 1004 aa10.59□□□□□ -0.71
PTCHD4-201ENST00000339488 HAUS4Q9H6D7 363 aa10.59□□□□□ -0.71
PTCHD4-201ENST00000339488 TUT1Q9H6E5 874 aaKnown RBP10.59□□□□□ -0.71
PTCHD4-201ENST00000339488 METTL5Q9NRN9 209 aaKnown RBP10.59□□□□□ -0.71
PTCHD4-201ENST00000339488 ECHDC1Q9NTX5 307 aa10.59□□□□□ -0.71
PTCHD4-201ENST00000339488 PNMA2Q9UL42 364 aa10.59□□□□□ -0.71
PTCHD4-201ENST00000339488 TMEM110-MUSTN1A8MSY1 372 aa10.58□□□□□ -0.72
PTCHD4-201ENST00000339488 GNAZP19086 355 aa10.58□□□□□ -0.72
PTCHD4-201ENST00000339488 CTNNA1P35221 906 aaKnown RBP10.58□□□□□ -0.72
PTCHD4-201ENST00000339488 PEX5P50542 639 aa10.58□□□□□ -0.72
PTCHD4-201ENST00000339488 PDE6CP51160 858 aa10.58□□□□□ -0.72
PTCHD4-201ENST00000339488 POSTNQ15063 836 aa10.58□□□□□ -0.72
PTCHD4-201ENST00000339488 UAP1Q16222 522 aaPredicted RBP10.58□□□□□ -0.72
PTCHD4-201ENST00000339488 MAP7D1Q3KQU3 841 aa10.58□□□□□ -0.72
PTCHD4-201ENST00000339488 IQCEQ6IPM2 695 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms