RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 KRT9P35527 623 aa18.28■□□□□ 0.52
LITAF-201ENST00000339430 KRT25Q7Z3Z0 450 aa18.28■□□□□ 0.52
LITAF-201ENST00000339430 TRIM47Q96LD4 638 aa18.28■□□□□ 0.52
LITAF-201ENST00000339430 ST7Q9NRC1 585 aa18.28■□□□□ 0.52
LITAF-201ENST00000339430 PRDM4Q9UKN5 801 aa18.28■□□□□ 0.52
LITAF-201ENST00000339430 FAM196BA6NMK8 535 aa18.28■□□□□ 0.52
LITAF-201ENST00000339430 LAD1O00515 517 aa18.28■□□□□ 0.52
LITAF-201ENST00000339430 ZNF569Q5MCW4 686 aa18.28■□□□□ 0.52
LITAF-201ENST00000339430 SAMD7Q7Z3H4 446 aa18.28■□□□□ 0.52
LITAF-201ENST00000339430 LRRC47Q8N1G4 583 aaKnown RBP18.28■□□□□ 0.52
LITAF-201ENST00000339430 TBCKQ8TEA7 893 aa18.28■□□□□ 0.52
LITAF-201ENST00000339430 CCDC51Q96ER9 411 aa18.28■□□□□ 0.52
LITAF-201ENST00000339430 EHD4Q9H223 541 aa18.28■□□□□ 0.52
LITAF-201ENST00000339430 SWAP70Q9UH65 585 aa18.28■□□□□ 0.52
LITAF-201ENST00000339430 KIF5CO60282 957 aa18.27■□□□□ 0.52
LITAF-201ENST00000339430 SEC31AO94979 1220 aaKnown RBP18.27■□□□□ 0.52
LITAF-201ENST00000339430 SHMT1P34896 483 aa18.27■□□□□ 0.52
LITAF-201ENST00000339430 PRPHP41219 470 aa18.27■□□□□ 0.52
LITAF-201ENST00000339430 KCNB1Q14721 858 aa18.27■□□□□ 0.52
LITAF-201ENST00000339430 NEK8Q86SG6 692 aa18.27■□□□□ 0.52
LITAF-201ENST00000339430 DICER1Q9UPY3 1922 aaKnown RBP18.27■□□□□ 0.52
LITAF-201ENST00000339430 GNA11P29992 359 aa18.27■□□□□ 0.52
LITAF-201ENST00000339430 POTEDQ86YR6 584 aa18.27■□□□□ 0.52
LITAF-201ENST00000339430 GIMAP8Q8ND71 665 aaPredicted RBP18.27■□□□□ 0.52
LITAF-201ENST00000339430 COA7Q96BR5 231 aa18.27■□□□□ 0.52
LITAF-201ENST00000339430 DNAJC18Q9H819 358 aa18.27■□□□□ 0.52
LITAF-201ENST00000339430 FAM53CQ9NYF3 392 aa18.27■□□□□ 0.52
LITAF-201ENST00000339430 RNF181Q9P0P0 153 aa18.27■□□□□ 0.52
LITAF-201ENST00000339430 ZHX1Q9UKY1 873 aaPredicted RBP18.27■□□□□ 0.52
LITAF-201ENST00000339430 PSMA7O14818 248 aa18.26■□□□□ 0.51
LITAF-201ENST00000339430 RHOBTB3O94955 611 aa18.26■□□□□ 0.51
LITAF-201ENST00000339430 STIM1Q13586 685 aa18.26■□□□□ 0.51
LITAF-201ENST00000339430 TBC1D10BQ4KMP7 808 aaPredicted RBP18.26■□□□□ 0.51
LITAF-201ENST00000339430 TMTC1Q8IUR5 882 aa18.26■□□□□ 0.51
LITAF-201ENST00000339430 CSRNP1Q96S65 589 aa18.26■□□□□ 0.51
LITAF-201ENST00000339430 CHP1Q99653 195 aa18.26■□□□□ 0.51
LITAF-201ENST00000339430 SLF1Q9BQI6 1058 aa18.26■□□□□ 0.51
LITAF-201ENST00000339430 ARGLU1Q9NWB6 273 aaPredicted RBP18.26■□□□□ 0.51
LITAF-201ENST00000339430 FHOD1Q9Y613 1164 aa18.26■□□□□ 0.51
LITAF-201ENST00000339430 ATRNL1Q5VV63 1379 aa18.26■□□□□ 0.51
LITAF-201ENST00000339430 AKR1B1P15121 316 aa18.26■□□□□ 0.51
LITAF-201ENST00000339430 MMP14P50281 582 aa18.26■□□□□ 0.51
LITAF-201ENST00000339430 PDE4DQ08499 809 aa18.26■□□□□ 0.51
LITAF-201ENST00000339430 BMS1Q14692 1282 aaKnown RBP18.26■□□□□ 0.51
LITAF-201ENST00000339430 TMCO3Q6UWJ1 677 aa18.26■□□□□ 0.51
LITAF-201ENST00000339430 REXO1Q8N1G1 1221 aaKnown RBP18.26■□□□□ 0.51
LITAF-201ENST00000339430 HPS3Q969F9 1004 aa18.26■□□□□ 0.51
LITAF-201ENST00000339430 GTPBP4Q9BZE4 634 aaKnown RBP18.26■□□□□ 0.51
LITAF-201ENST00000339430 SCAF8Q9UPN6 1271 aaKnown RBP18.26■□□□□ 0.51
LITAF-201ENST00000339430 SIPA1L1O43166 1804 aa18.26■□□□□ 0.51
LITAF-201ENST00000339430 CNTNAP1P78357 1384 aa18.25■□□□□ 0.51
LITAF-201ENST00000339430 PDHBP11177 359 aa18.25■□□□□ 0.51
LITAF-201ENST00000339430 FECHP22830 423 aa18.25■□□□□ 0.51
LITAF-201ENST00000339430 TXKP42681 527 aa18.25■□□□□ 0.51
LITAF-201ENST00000339430 ASIC1P78348 528 aa18.25■□□□□ 0.51
LITAF-201ENST00000339430 CYP26C1Q6V0L0 522 aa18.25■□□□□ 0.51
LITAF-201ENST00000339430 GPC2Q8N158 579 aa18.25■□□□□ 0.51
LITAF-201ENST00000339430 SLC35F6Q8N357 371 aa18.25■□□□□ 0.51
LITAF-201ENST00000339430 MB21D1Q8N884 522 aa18.25■□□□□ 0.51
LITAF-201ENST00000339430 FAM151AQ8WW52 585 aa18.25■□□□□ 0.51
LITAF-201ENST00000339430 TRIM34Q9BYJ4 488 aa18.25■□□□□ 0.51
LITAF-201ENST00000339430 PUF60Q9UHX1 559 aaKnown RBP18.25■□□□□ 0.51
LITAF-201ENST00000339430 TTC26A0AVF1 554 aa18.25■□□□□ 0.51
LITAF-201ENST00000339430 PNMA6AP0CW24 399 aaPredicted RBP18.25■□□□□ 0.51
LITAF-201ENST00000339430 FCER1AP12319 257 aa18.25■□□□□ 0.51
LITAF-201ENST00000339430 AK8Q96MA6 479 aa18.25■□□□□ 0.51
LITAF-201ENST00000339430 TRIM9Q9C026 710 aa18.25■□□□□ 0.51
LITAF-201ENST00000339430 GPCPD1Q9NPB8 672 aa18.25■□□□□ 0.51
LITAF-201ENST00000339430 TFRCP02786 760 aaKnown RBP18.24■□□□□ 0.51
LITAF-201ENST00000339430 STK4Q13043 487 aa18.24■□□□□ 0.51
LITAF-201ENST00000339430 TRIM14Q14142 442 aa18.24■□□□□ 0.51
LITAF-201ENST00000339430 UTP14CQ5TAP6 766 aaKnown RBP18.24■□□□□ 0.51
LITAF-201ENST00000339430 TTI2Q6NXR4 508 aa18.24■□□□□ 0.51
LITAF-201ENST00000339430 RSRC2Q7L4I2 434 aaKnown RBP18.24■□□□□ 0.51
LITAF-201ENST00000339430 CSGALNACT2Q8N6G5 542 aa18.24■□□□□ 0.51
LITAF-201ENST00000339430 TMEM39BQ9GZU3 492 aa18.24■□□□□ 0.51
LITAF-201ENST00000339430 EXOC1Q9NV70 894 aa18.24■□□□□ 0.51
LITAF-201ENST00000339430 MAGEC2Q9UBF1 373 aaPredicted RBP18.24■□□□□ 0.51
LITAF-201ENST00000339430 LGALS16A8MUM7 142 aa18.24■□□□□ 0.51
LITAF-201ENST00000339430 B4DLN1 442 aa18.24■□□□□ 0.51
LITAF-201ENST00000339430 MYL1P05976 194 aa18.24■□□□□ 0.51
LITAF-201ENST00000339430 GPR162Q16538 588 aa18.24■□□□□ 0.51
LITAF-201ENST00000339430 KIF4BQ2VIQ3 1234 aa18.24■□□□□ 0.51
LITAF-201ENST00000339430 FKBP1CQ5VVH2 108 aa18.24■□□□□ 0.51
LITAF-201ENST00000339430 DUSP9Q99956 384 aaKnown RBP18.24■□□□□ 0.51
LITAF-201ENST00000339430 MMTAG2Q9BU76 263 aaKnown RBP18.24■□□□□ 0.51
LITAF-201ENST00000339430 THAP9Q9H5L6 903 aa18.24■□□□□ 0.51
LITAF-201ENST00000339430 MPHOSPH10O00566 681 aaKnown RBP18.23■□□□□ 0.51
LITAF-201ENST00000339430 EEF1GP26641 437 aaKnown RBP18.23■□□□□ 0.51
LITAF-201ENST00000339430 C9orf131Q5VYM1 1079 aa18.23■□□□□ 0.51
LITAF-201ENST00000339430 CDAN1Q8IWY9 1227 aa18.23■□□□□ 0.51
LITAF-201ENST00000339430 GOLGA1Q92805 767 aa18.23■□□□□ 0.51
LITAF-201ENST00000339430 MTMR4Q9NYA4 1195 aa18.23■□□□□ 0.51
LITAF-201ENST00000339430 ASTN2O75129 1339 aaPredicted RBP18.23■□□□□ 0.51
LITAF-201ENST00000339430 COL2A1P02458 1487 aaPredicted RBP18.23■□□□□ 0.51
LITAF-201ENST00000339430 ZRANB2O95218 330 aaKnown RBP eCLIP18.23■□□□□ 0.51
LITAF-201ENST00000339430 ANKRD40Q6AI12 368 aa18.23■□□□□ 0.51
LITAF-201ENST00000339430 GPR161Q8N6U8 529 aaKnown RBP18.23■□□□□ 0.51
LITAF-201ENST00000339430 ZNF507Q8TCN5 953 aa18.23■□□□□ 0.51
LITAF-201ENST00000339430 RIOX1Q9H6W3 641 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms